RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 SPHKAPQ2M3C7 1700 aa31.57■■■□□ 2.64
NELFB-201ENST00000343053 KIF3BO15066 747 aa31.57■■■□□ 2.64
NELFB-201ENST00000343053 SCAF11Q99590 1463 aaKnown RBP31.57■■■□□ 2.64
NELFB-201ENST00000343053 TRPM2O94759 1503 aa31.56■■■□□ 2.64
NELFB-201ENST00000343053 CFAP70Q5T0N1 1121 aa31.56■■■□□ 2.64
NELFB-201ENST00000343053 UGGT1Q9NYU2 1555 aa31.55■■■□□ 2.64
NELFB-201ENST00000343053 ZFYVE16Q7Z3T8 1539 aa31.55■■■□□ 2.64
NELFB-201ENST00000343053 CEP152O94986 1710 aa31.54■■■□□ 2.64
NELFB-201ENST00000343053 MS4A1P11836 297 aa31.53■■■□□ 2.64
NELFB-201ENST00000343053 GOLGA2Q08379 1002 aa31.53■■■□□ 2.64
NELFB-201ENST00000343053 SPINK5Q9NQ38 1064 aaPredicted RBP31.52■■■□□ 2.64
NELFB-201ENST00000343053 ASXL1Q8IXJ9 1541 aa31.52■■■□□ 2.64
NELFB-201ENST00000343053 INSRP06213 1382 aa31.51■■■□□ 2.64
NELFB-201ENST00000343053 SYNMO15061 1565 aa31.51■■■□□ 2.64
NELFB-201ENST00000343053 MYOM1P52179 1685 aa31.51■■■□□ 2.63
NELFB-201ENST00000343053 APAF1O14727 1248 aa31.5■■■□□ 2.63
NELFB-201ENST00000343053 CDCA8Q53HL2 280 aa31.5■■■□□ 2.63
NELFB-201ENST00000343053 ADGRF5Q8IZF2 1346 aa31.48■■■□□ 2.63
NELFB-201ENST00000343053 ZNF521Q96K83 1311 aa31.47■■■□□ 2.63
NELFB-201ENST00000343053 SCAPERQ9BY12 1400 aa31.46■■■□□ 2.63
NELFB-201ENST00000343053 PTPRTO14522 1441 aa31.45■■■□□ 2.62
NELFB-201ENST00000343053 SLC4A3P48751 1232 aa31.44■■■□□ 2.62
NELFB-201ENST00000343053 NEFMP07197 916 aa31.43■■■□□ 2.62
NELFB-201ENST00000343053 DMRT2Q9Y5R5 561 aa31.43■■■□□ 2.62
NELFB-201ENST00000343053 KDM2BQ8NHM5 1336 aa31.43■■■□□ 2.62
NELFB-201ENST00000343053 CHGAP10645 457 aaKnown RBP31.43■■■□□ 2.62
NELFB-201ENST00000343053 RGS3P49796 1198 aa31.42■■■□□ 2.62
NELFB-201ENST00000343053 KANK1Q14678 1352 aa31.42■■■□□ 2.62
NELFB-201ENST00000343053 BCAR3O75815 825 aa31.42■■■□□ 2.62
NELFB-201ENST00000343053 TNNT2P45379 298 aaPredicted RBP31.42■■■□□ 2.62
NELFB-201ENST00000343053 SLFN5Q08AF3 891 aa31.42■■■□□ 2.62
NELFB-201ENST00000343053 EIF3AQ14152 1382 aaKnown RBP31.42■■■□□ 2.62
NELFB-201ENST00000343053 CARD14Q9BXL6 1004 aa31.41■■■□□ 2.62
NELFB-201ENST00000343053 ATP7AQ04656 1500 aa31.4■■■□□ 2.62
NELFB-201ENST00000343053 TET3O43151 1660 aa31.4■■■□□ 2.62
NELFB-201ENST00000343053 KDM5AP29375 1690 aaKnown RBP31.4■■■□□ 2.62
NELFB-201ENST00000343053 PIK3C2GO75747 1445 aa31.39■■■□□ 2.62
NELFB-201ENST00000343053 FANCAO15360 1455 aa31.39■■■□□ 2.62
NELFB-201ENST00000343053 RTEL1-TNFRSF6BF6WH68 1400 aa31.38■■■□□ 2.61
NELFB-201ENST00000343053 DEPDC5O75140 1603 aa31.38■■■□□ 2.61
NELFB-201ENST00000343053 ERVK-7P63135 1459 aa31.36■■■□□ 2.61
NELFB-201ENST00000343053 CENPQQ7L2Z9 268 aaPredicted RBP31.36■■■□□ 2.61
NELFB-201ENST00000343053 ABCA6Q8N139 1617 aa31.36■■■□□ 2.61
NELFB-201ENST00000343053 UHRF1BP1LA0JNW5 1464 aa31.35■■■□□ 2.61
NELFB-201ENST00000343053 NEUROD2Q15784 382 aa31.34■■■□□ 2.61
NELFB-201ENST00000343053 CFAP65Q6ZU64 1925 aaKnown RBP31.34■■■□□ 2.61
NELFB-201ENST00000343053 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.34■■■□□ 2.61
NELFB-201ENST00000343053 CLASP1Q7Z460 1538 aa31.34■■■□□ 2.61
NELFB-201ENST00000343053 SENP3Q9H4L4 574 aaPredicted RBP31.32■■■□□ 2.6
NELFB-201ENST00000343053 ADGRL1O94910 1474 aa31.31■■■□□ 2.6
NELFB-201ENST00000343053 INO80Q9ULG1 1556 aaPredicted RBP31.3■■■□□ 2.6
NELFB-201ENST00000343053 TRAK1Q9UPV9 953 aa31.3■■■□□ 2.6
NELFB-201ENST00000343053 RRP7AQ9Y3A4 280 aaKnown RBP31.29■■■□□ 2.6
NELFB-201ENST00000343053 MAP3K4Q9Y6R4 1608 aa31.29■■■□□ 2.6
NELFB-201ENST00000343053 MROH2AA6NES4 1674 aa31.27■■■□□ 2.6
NELFB-201ENST00000343053 NKTRP30414 1462 aaKnown RBP31.27■■■□□ 2.6
NELFB-201ENST00000343053 C8orf34Q49A92 452 aa31.26■■■□□ 2.59
NELFB-201ENST00000343053 MROH1Q8NDA8 1641 aa31.25■■■□□ 2.59
NELFB-201ENST00000343053 STAC3Q96MF2 364 aa31.25■■■□□ 2.59
NELFB-201ENST00000343053 TRMT2AQ8IZ69 625 aaKnown RBP31.24■■■□□ 2.59
NELFB-201ENST00000343053 VWDEQ8N2E2 1590 aa31.24■■■□□ 2.59
NELFB-201ENST00000343053 TMEM132EQ6IEE7 984 aa31.24■■■□□ 2.59
NELFB-201ENST00000343053 NPC1L1Q9UHC9 1359 aa31.24■■■□□ 2.59
NELFB-201ENST00000343053 KIF1BO60333 1816 aa31.23■■■□□ 2.59
NELFB-201ENST00000343053 NOS1P29475 1434 aa31.23■■■□□ 2.59
NELFB-201ENST00000343053 NUTM2DQ5VT03 806 aaPredicted RBP31.23■■■□□ 2.59
NELFB-201ENST00000343053 FAM161AQ3B820 660 aa31.22■■■□□ 2.59
NELFB-201ENST00000343053 DDRGK1Q96HY6 314 aa31.22■■■□□ 2.59
NELFB-201ENST00000343053 SLC12A5Q9H2X9 1139 aa31.22■■■□□ 2.59
NELFB-201ENST00000343053 ABCA9Q8IUA7 1624 aa31.22■■■□□ 2.59
NELFB-201ENST00000343053 CANXP27824 592 aaKnown RBP31.21■■■□□ 2.59
NELFB-201ENST00000343053 KIAA1210Q9ULL0 1709 aa31.21■■■□□ 2.59
NELFB-201ENST00000343053 E9PSI1 815 aa31.21■■■□□ 2.59
NELFB-201ENST00000343053 PANK1Q8TE04 598 aa31.21■■■□□ 2.59
NELFB-201ENST00000343053 FRAT1Q92837 279 aaPredicted RBP31.19■■■□□ 2.58
NELFB-201ENST00000343053 ARAP3Q8WWN8 1544 aa31.19■■■□□ 2.58
NELFB-201ENST00000343053 NSD3Q9BZ95 1437 aa31.19■■■□□ 2.58
NELFB-201ENST00000343053 PPRC1Q5VV67 1664 aaKnown RBP31.18■■■□□ 2.58
NELFB-201ENST00000343053 CENPJQ9HC77 1338 aaPredicted RBP31.18■■■□□ 2.58
NELFB-201ENST00000343053 IGHDP01880 384 aa31.18■■■□□ 2.58
NELFB-201ENST00000343053 GGT6Q6P531 493 aa31.18■■■□□ 2.58
NELFB-201ENST00000343053 COG6Q9Y2V7 657 aa31.18■■■□□ 2.58
NELFB-201ENST00000343053 MORC1Q86VD1 984 aa31.17■■■□□ 2.58
NELFB-201ENST00000343053 DAXXQ9UER7 740 aaPredicted RBP31.17■■■□□ 2.58
NELFB-201ENST00000343053 MYOM2P54296 1465 aa31.17■■■□□ 2.58
NELFB-201ENST00000343053 EFCAB6Q5THR3 1501 aa31.16■■■□□ 2.58
NELFB-201ENST00000343053 WWC1Q8IX03 1113 aa31.16■■■□□ 2.58
NELFB-201ENST00000343053 PPM1GO15355 546 aaPredicted RBP31.15■■■□□ 2.58
NELFB-201ENST00000343053 BCL2L13Q9BXK5 485 aa31.14■■■□□ 2.58
NELFB-201ENST00000343053 IFT172Q9UG01 1749 aa31.12■■■□□ 2.57
NELFB-201ENST00000343053 TNNQ9UQP3 1299 aa31.11■■■□□ 2.57
NELFB-201ENST00000343053 KIDINS220Q9ULH0 1771 aa31.1■■■□□ 2.57
NELFB-201ENST00000343053 IL27Q8NEV9 243 aa31.1■■■□□ 2.57
NELFB-201ENST00000343053 ASXL2Q76L83 1435 aa31.09■■■□□ 2.57
NELFB-201ENST00000343053 SAFB2Q14151 953 aaKnown RBP eCLIP31.09■■■□□ 2.57
NELFB-201ENST00000343053 NFKBIBQ15653 356 aa31.07■■■□□ 2.56
NELFB-201ENST00000343053 RTN4Q9NQC3 1192 aaKnown RBP31.07■■■□□ 2.56
NELFB-201ENST00000343053 PRKCSHP14314 528 aaPredicted RBP31.06■■■□□ 2.56
NELFB-201ENST00000343053 TCP11L2Q8N4U5 519 aa31.06■■■□□ 2.56
NELFB-201ENST00000343053 USP35Q9P2H5 1018 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms