RNA–Protein interactions for RNA: ENST00000339569.9

MSL1-201, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 3,424 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-201ENST00000339569 NEUROD2Q15784 382 aa7.06□□□□□ -1.28
MSL1-201ENST00000339569 EFCAB2Q5VUJ9 269 aa7.06□□□□□ -1.28
MSL1-201ENST00000339569 KNDC1Q76NI1 1749 aa7.06□□□□□ -1.28
MSL1-201ENST00000339569 ZNF142P52746 1687 aaPredicted RBP7.06□□□□□ -1.28
MSL1-201ENST00000339569 CD109Q6YHK3 1445 aa7.05□□□□□ -1.28
MSL1-201ENST00000339569 PREX1Q8TCU6 1659 aa7.05□□□□□ -1.28
MSL1-201ENST00000339569 SCAPERQ9BY12 1400 aa7.05□□□□□ -1.28
MSL1-201ENST00000339569 ECM2O94769 699 aaPredicted RBP7.05□□□□□ -1.28
MSL1-201ENST00000339569 ZMYND15Q9H091 742 aa7.05□□□□□ -1.28
MSL1-201ENST00000339569 MTMR7Q9Y216 660 aa7.05□□□□□ -1.28
MSL1-201ENST00000339569 ABCC3O15438 1527 aa7.05□□□□□ -1.28
MSL1-201ENST00000339569 CNTLNQ9NXG0 1405 aa7.04□□□□□ -1.28
MSL1-201ENST00000339569 A2MP01023 1474 aa7.04□□□□□ -1.28
MSL1-201ENST00000339569 UBE2Q2Q8WVN8 375 aa7.04□□□□□ -1.28
MSL1-201ENST00000339569 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.04□□□□□ -1.28
MSL1-201ENST00000339569 RALGAPBQ86X10 1494 aa7.04□□□□□ -1.28
MSL1-201ENST00000339569 POTEDQ86YR6 584 aa7.04□□□□□ -1.28
MSL1-201ENST00000339569 GPRASP1Q5JY77 1395 aa7.04□□□□□ -1.28
MSL1-201ENST00000339569 RIMS1Q86UR5 1692 aaKnown RBP7.04□□□□□ -1.28
MSL1-201ENST00000339569 NOS1P29475 1434 aa7.03□□□□□ -1.28
MSL1-201ENST00000339569 CHGAP10645 457 aaKnown RBP7.02□□□□□ -1.28
MSL1-201ENST00000339569 KIF15Q9NS87 1388 aa7.02□□□□□ -1.28
MSL1-201ENST00000339569 TRAPPC8Q9Y2L5 1435 aa7.02□□□□□ -1.28
MSL1-201ENST00000339569 ARID4BQ4LE39 1312 aaPredicted RBP7.02□□□□□ -1.28
MSL1-201ENST00000339569 CFDP1Q9UEE9 299 aaPredicted RBP7.02□□□□□ -1.29
MSL1-201ENST00000339569 SETD1AO15047 1707 aaKnown RBP7.02□□□□□ -1.29
MSL1-201ENST00000339569 RGS22Q8NE09 1264 aa7.01□□□□□ -1.29
MSL1-201ENST00000339569 CLTCQ00610 1675 aaKnown RBP7.01□□□□□ -1.29
MSL1-201ENST00000339569 CLTCL1P53675 1640 aa7.01□□□□□ -1.29
MSL1-201ENST00000339569 SPATA31E1Q6ZUB1 1445 aa7.01□□□□□ -1.29
MSL1-201ENST00000339569 KCTD17Q8N5Z5 321 aa7.01□□□□□ -1.29
MSL1-201ENST00000339569 SIGLEC1Q9BZZ2 1709 aa7.01□□□□□ -1.29
MSL1-201ENST00000339569 USP32Q8NFA0 1604 aa7.01□□□□□ -1.29
MSL1-201ENST00000339569 ZBTB7CA1YPR0 619 aa7.01□□□□□ -1.29
MSL1-201ENST00000339569 RAD21O60216 631 aa7.01□□□□□ -1.29
MSL1-201ENST00000339569 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.01□□□□□ -1.29
MSL1-201ENST00000339569 APBB1O00213 710 aa7□□□□□ -1.29
MSL1-201ENST00000339569 PCGF6Q9BYE7 350 aa7□□□□□ -1.29
MSL1-201ENST00000339569 KDM4FA0A1W2PPD8 638 aa7□□□□□ -1.29
MSL1-201ENST00000339569 DIP2AQ14689 1571 aa7□□□□□ -1.29
MSL1-201ENST00000339569 PLA2R1Q13018 1463 aa7□□□□□ -1.29
MSL1-201ENST00000339569 TMEM131LA2VDJ0 1609 aa6.99□□□□□ -1.29
MSL1-201ENST00000339569 RSPH6AQ9H0K4 717 aa6.99□□□□□ -1.29
MSL1-201ENST00000339569 SLC24A3Q9HC58 644 aa6.99□□□□□ -1.29
MSL1-201ENST00000339569 ADAMTSL3P82987 1691 aa6.99□□□□□ -1.29
MSL1-201ENST00000339569 LMOD2Q6P5Q4 547 aa6.98□□□□□ -1.29
MSL1-201ENST00000339569 RBM25P49756 843 aaKnown RBP6.98□□□□□ -1.29
MSL1-201ENST00000339569 DLC1Q96QB1 1528 aa6.98□□□□□ -1.29
MSL1-201ENST00000339569 USP54Q70EL1 1684 aa6.98□□□□□ -1.29
MSL1-201ENST00000339569 IRX6P78412 446 aaPredicted RBP6.97□□□□□ -1.29
MSL1-201ENST00000339569 INSRP06213 1382 aa6.97□□□□□ -1.29
MSL1-201ENST00000339569 P3H3Q8IVL6 736 aa6.97□□□□□ -1.29
MSL1-201ENST00000339569 ATXN8OSP0DMR3 200 aa6.97□□□□□ -1.29
MSL1-201ENST00000339569 SPINK5Q9NQ38 1064 aaPredicted RBP6.97□□□□□ -1.29
MSL1-201ENST00000339569 HSP90B1P14625 803 aaKnown RBP6.96□□□□□ -1.3
MSL1-201ENST00000339569 NPATQ14207 1427 aa6.96□□□□□ -1.3
MSL1-201ENST00000339569 NKX1-1Q15270 411 aaPredicted RBP6.96□□□□□ -1.3
MSL1-201ENST00000339569 SBNO2Q9Y2G9 1366 aa6.95□□□□□ -1.3
MSL1-201ENST00000339569 ZNF692Q9BU19 519 aaPredicted RBP6.95□□□□□ -1.3
MSL1-201ENST00000339569 BCL11AQ9H165 835 aa6.95□□□□□ -1.3
MSL1-201ENST00000339569 GPBP1L1Q9HC44 474 aaPredicted RBP6.95□□□□□ -1.3
MSL1-201ENST00000339569 NEXMIFQ5QGS0 1516 aa6.95□□□□□ -1.3
MSL1-201ENST00000339569 TSPY4P0CV99 314 aa6.95□□□□□ -1.3
MSL1-201ENST00000339569 TSPY10P0CW01 314 aa6.95□□□□□ -1.3
MSL1-201ENST00000339569 U3KPZ7 1027 aaPredicted RBP6.95□□□□□ -1.3
MSL1-201ENST00000339569 RPGRIP1LQ68CZ1 1315 aa6.95□□□□□ -1.3
MSL1-201ENST00000339569 FER1L4A9Z1Z3 1794 aa6.94□□□□□ -1.3
MSL1-201ENST00000339569 PDE4CQ08493 712 aa6.94□□□□□ -1.3
MSL1-201ENST00000339569 ADGRB2O60241 1585 aa6.94□□□□□ -1.3
MSL1-201ENST00000339569 BRD2P25440 801 aaKnown RBP6.94□□□□□ -1.3
MSL1-201ENST00000339569 KANK1Q14678 1352 aa6.94□□□□□ -1.3
MSL1-201ENST00000339569 LRRC7Q96NW7 1537 aa6.94□□□□□ -1.3
MSL1-201ENST00000339569 PUS7Q96PZ0 661 aaKnown RBP6.94□□□□□ -1.3
MSL1-201ENST00000339569 UBR1Q8IWV7 1749 aa6.93□□□□□ -1.3
MSL1-201ENST00000339569 SLIT1O75093 1534 aa6.93□□□□□ -1.3
MSL1-201ENST00000339569 MPHOSPH9Q99550 1183 aa6.92□□□□□ -1.3
MSL1-201ENST00000339569 NLRP1Q9C000 1473 aa6.92□□□□□ -1.3
MSL1-201ENST00000339569 MKRN3Q13064 507 aaKnown RBP6.92□□□□□ -1.3
MSL1-201ENST00000339569 KTN1Q86UP2 1357 aaKnown RBP6.92□□□□□ -1.3
MSL1-201ENST00000339569 SPAG9O60271 1321 aaKnown RBP6.92□□□□□ -1.3
MSL1-201ENST00000339569 ERVK-7P63135 1459 aa6.92□□□□□ -1.3
MSL1-201ENST00000339569 CCDC82Q8N4S0 544 aa6.91□□□□□ -1.3
MSL1-201ENST00000339569 C3P01024 1663 aa6.91□□□□□ -1.3
MSL1-201ENST00000339569 ADGRB1O14514 1584 aa6.91□□□□□ -1.3
MSL1-201ENST00000339569 PPP1R15AO75807 674 aaPredicted RBP6.91□□□□□ -1.3
MSL1-201ENST00000339569 NUP155O75694 1391 aa6.91□□□□□ -1.3
MSL1-201ENST00000339569 ANKRD26Q9UPS8 1709 aa6.91□□□□□ -1.3
MSL1-201ENST00000339569 ARHGAP23Q9P227 1491 aa6.91□□□□□ -1.3
MSL1-201ENST00000339569 ARHGEF28Q8N1W1 1705 aaKnown RBP6.9□□□□□ -1.3
MSL1-201ENST00000339569 AEBP1Q8IUX7 1158 aa6.9□□□□□ -1.3
MSL1-201ENST00000339569 POLR3GLQ9BT43 218 aa6.9□□□□□ -1.3
MSL1-201ENST00000339569 CYB5RLQ6IPT4 315 aa6.9□□□□□ -1.31
MSL1-201ENST00000339569 ABCB7O75027 752 aa6.89□□□□□ -1.31
MSL1-201ENST00000339569 NRXN3Q9Y4C0 1643 aa6.89□□□□□ -1.31
MSL1-201ENST00000339569 MYOM1P52179 1685 aa6.89□□□□□ -1.31
MSL1-201ENST00000339569 CPS1P31327 1500 aa6.89□□□□□ -1.31
MSL1-201ENST00000339569 MYCNP04198 464 aaPredicted RBP6.89□□□□□ -1.31
MSL1-201ENST00000339569 ZNF644Q9H582 1327 aaPredicted RBP6.89□□□□□ -1.31
MSL1-201ENST00000339569 IL27Q8NEV9 243 aa6.88□□□□□ -1.31
MSL1-201ENST00000339569 ROCK2O75116 1388 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms