RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 CHGAP10645 457 aaKnown RBP18.95■□□□□ 0.62
SRSF3-201ENST00000339436 ANKRD30BQ9BXX2 1392 aa18.94■□□□□ 0.62
SRSF3-201ENST00000339436 LTKP29376 864 aa18.94■□□□□ 0.62
SRSF3-201ENST00000339436 SPATA31E1Q6ZUB1 1445 aa18.93■□□□□ 0.62
SRSF3-201ENST00000339436 TXNDC2Q86VQ3 553 aa18.92■□□□□ 0.62
SRSF3-201ENST00000339436 EID1Q9Y6B2 187 aa18.92■□□□□ 0.62
SRSF3-201ENST00000339436 NRXN3Q9Y4C0 1643 aa18.89■□□□□ 0.61
SRSF3-201ENST00000339436 PLEKHG1Q9ULL1 1385 aa18.89■□□□□ 0.61
SRSF3-201ENST00000339436 DHX57Q6P158 1386 aaKnown RBP18.88■□□□□ 0.61
SRSF3-201ENST00000339436 ZNF326Q5BKZ1 582 aaKnown RBP18.87■□□□□ 0.61
SRSF3-201ENST00000339436 PCGF6Q9BYE7 350 aa18.87■□□□□ 0.61
SRSF3-201ENST00000339436 DIP2AQ14689 1571 aa18.87■□□□□ 0.61
SRSF3-201ENST00000339436 SETBP1Q9Y6X0 1596 aa18.87■□□□□ 0.61
SRSF3-201ENST00000339436 STRCP1A6NGW2 1772 aa18.86■□□□□ 0.61
SRSF3-201ENST00000339436 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.86■□□□□ 0.61
SRSF3-201ENST00000339436 PPP1R15AO75807 674 aaPredicted RBP18.85■□□□□ 0.61
SRSF3-201ENST00000339436 HDGFP51858 240 aaKnown RBP18.85■□□□□ 0.61
SRSF3-201ENST00000339436 LTBP4Q8N2S1 1624 aa18.85■□□□□ 0.61
SRSF3-201ENST00000339436 SETD1AO15047 1707 aaKnown RBP18.84■□□□□ 0.61
SRSF3-201ENST00000339436 NUTM2DQ5VT03 806 aaPredicted RBP18.83■□□□□ 0.6
SRSF3-201ENST00000339436 CHD2O14647 1828 aaKnown RBP18.82■□□□□ 0.6
SRSF3-201ENST00000339436 RPGRIP1LQ68CZ1 1315 aa18.82■□□□□ 0.6
SRSF3-201ENST00000339436 ADAMTS13Q76LX8 1427 aa18.81■□□□□ 0.6
SRSF3-201ENST00000339436 ZNF335Q9H4Z2 1342 aaPredicted RBP18.81■□□□□ 0.6
SRSF3-201ENST00000339436 NWD1Q149M9 1564 aa18.81■□□□□ 0.6
SRSF3-201ENST00000339436 MYOM2P54296 1465 aa18.8■□□□□ 0.6
SRSF3-201ENST00000339436 CPS1P31327 1500 aa18.79■□□□□ 0.6
SRSF3-201ENST00000339436 RGL3Q3MIN7 710 aa18.78■□□□□ 0.6
SRSF3-201ENST00000339436 SLC26A8Q96RN1 970 aa18.76■□□□□ 0.59
SRSF3-201ENST00000339436 SENP3Q9H4L4 574 aaPredicted RBP18.76■□□□□ 0.59
SRSF3-201ENST00000339436 LAMC1P11047 1609 aa18.75■□□□□ 0.59
SRSF3-201ENST00000339436 NRXN1Q9ULB1 1477 aa18.75■□□□□ 0.59
SRSF3-201ENST00000339436 VGFO15240 615 aaPredicted RBP18.75■□□□□ 0.59
SRSF3-201ENST00000339436 BCANQ96GW7 911 aa18.75■□□□□ 0.59
SRSF3-201ENST00000339436 XIRP1Q702N8 1843 aaKnown RBP18.75■□□□□ 0.59
SRSF3-201ENST00000339436 XRN1Q8IZH2 1706 aaKnown RBP18.75■□□□□ 0.59
SRSF3-201ENST00000339436 ALKQ9UM73 1620 aa18.75■□□□□ 0.59
SRSF3-201ENST00000339436 PIK3C2GO75747 1445 aa18.75■□□□□ 0.59
SRSF3-201ENST00000339436 NKTRP30414 1462 aaKnown RBP18.73■□□□□ 0.59
SRSF3-201ENST00000339436 TBX22Q9Y458 520 aa18.73■□□□□ 0.59
SRSF3-201ENST00000339436 PIK3R4Q99570 1358 aa18.72■□□□□ 0.59
SRSF3-201ENST00000339436 IQSEC2Q5JU85 1478 aa18.72■□□□□ 0.59
SRSF3-201ENST00000339436 ADGRF5Q8IZF2 1346 aa18.71■□□□□ 0.59
SRSF3-201ENST00000339436 LRRC7Q96NW7 1537 aa18.69■□□□□ 0.58
SRSF3-201ENST00000339436 ASXL1Q8IXJ9 1541 aa18.68■□□□□ 0.58
SRSF3-201ENST00000339436 METP08581 1390 aa18.68■□□□□ 0.58
SRSF3-201ENST00000339436 KNDC1Q76NI1 1749 aa18.67■□□□□ 0.58
SRSF3-201ENST00000339436 PTPRUQ92729 1446 aa18.67■□□□□ 0.58
SRSF3-201ENST00000339436 KCNA6P17658 529 aa18.67■□□□□ 0.58
SRSF3-201ENST00000339436 CERKQ8TCT0 537 aa18.67■□□□□ 0.58
SRSF3-201ENST00000339436 SIN3AQ96ST3 1273 aa18.67■□□□□ 0.58
SRSF3-201ENST00000339436 KIAA1210Q9ULL0 1709 aa18.66■□□□□ 0.58
SRSF3-201ENST00000339436 DCAF11Q8TEB1 546 aa18.64■□□□□ 0.58
SRSF3-201ENST00000339436 PRAG1Q86YV5 1406 aa18.64■□□□□ 0.57
SRSF3-201ENST00000339436 STAC3Q96MF2 364 aa18.64■□□□□ 0.57
SRSF3-201ENST00000339436 NEUROD1Q13562 356 aa18.62■□□□□ 0.57
SRSF3-201ENST00000339436 ADGRB1O14514 1584 aa18.61■□□□□ 0.57
SRSF3-201ENST00000339436 PTCH1Q13635 1447 aa18.61■□□□□ 0.57
SRSF3-201ENST00000339436 KDM2AQ9Y2K7 1162 aa18.6■□□□□ 0.57
SRSF3-201ENST00000339436 TMEM94Q12767 1356 aa18.6■□□□□ 0.57
SRSF3-201ENST00000339436 NALCNQ8IZF0 1738 aa18.59■□□□□ 0.57
SRSF3-201ENST00000339436 CLSPNQ9HAW4 1339 aa18.59■□□□□ 0.57
SRSF3-201ENST00000339436 L3MBTL2Q969R5 705 aa18.59■□□□□ 0.57
SRSF3-201ENST00000339436 C14orf93Q9H972 538 aaKnown RBP18.59■□□□□ 0.57
SRSF3-201ENST00000339436 AMOTL2Q9Y2J4 779 aa18.59■□□□□ 0.57
SRSF3-201ENST00000339436 TECPR2O15040 1411 aa18.58■□□□□ 0.57
SRSF3-201ENST00000339436 TRPM1Q7Z4N2 1603 aa18.58■□□□□ 0.56
SRSF3-201ENST00000339436 TONSLQ96HA7 1378 aa18.57■□□□□ 0.56
SRSF3-201ENST00000339436 CFAP70Q5T0N1 1121 aa18.56■□□□□ 0.56
SRSF3-201ENST00000339436 LRPPRCP42704 1394 aaKnown RBP18.56■□□□□ 0.56
SRSF3-201ENST00000339436 YTHDC2Q9H6S0 1430 aaKnown RBP18.56■□□□□ 0.56
SRSF3-201ENST00000339436 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.56■□□□□ 0.56
SRSF3-201ENST00000339436 PROSER2Q86WR7 435 aaPredicted RBP18.55■□□□□ 0.56
SRSF3-201ENST00000339436 NCOA3Q9Y6Q9 1424 aa18.55■□□□□ 0.56
SRSF3-201ENST00000339436 ARHGEF28Q8N1W1 1705 aaKnown RBP18.55■□□□□ 0.56
SRSF3-201ENST00000339436 ROBO2Q9HCK4 1378 aa18.54■□□□□ 0.56
SRSF3-201ENST00000339436 TMEM132EQ6IEE7 984 aa18.53■□□□□ 0.56
SRSF3-201ENST00000339436 DLC1Q96QB1 1528 aa18.52■□□□□ 0.56
SRSF3-201ENST00000339436 ABCC11Q96J66 1382 aa18.52■□□□□ 0.56
SRSF3-201ENST00000339436 CCER1Q8TC90 406 aaPredicted RBP18.52■□□□□ 0.56
SRSF3-201ENST00000339436 RBM33Q96EV2 1170 aaKnown RBP18.52■□□□□ 0.56
SRSF3-201ENST00000339436 ADGRL3Q9HAR2 1447 aa18.51■□□□□ 0.55
SRSF3-201ENST00000339436 MSH6P52701 1360 aa18.51■□□□□ 0.55
SRSF3-201ENST00000339436 FBXO41Q8TF61 875 aa18.49■□□□□ 0.55
SRSF3-201ENST00000339436 DCCP43146 1447 aa18.48■□□□□ 0.55
SRSF3-201ENST00000339436 FAM135BQ49AJ0 1406 aa18.48■□□□□ 0.55
SRSF3-201ENST00000339436 STK26Q9P289 416 aa18.48■□□□□ 0.55
SRSF3-201ENST00000339436 CDC42BPGQ6DT37 1551 aa18.47■□□□□ 0.55
SRSF3-201ENST00000339436 UBAP1LF5GYI3 381 aa18.47■□□□□ 0.55
SRSF3-201ENST00000339436 RALGAPBQ86X10 1494 aa18.46■□□□□ 0.55
SRSF3-201ENST00000339436 C14orf37Q86TY3 774 aa18.45■□□□□ 0.54
SRSF3-201ENST00000339436 TOM1O60784 492 aa18.44■□□□□ 0.54
SRSF3-201ENST00000339436 PLEKHH1Q9ULM0 1364 aa18.44■□□□□ 0.54
SRSF3-201ENST00000339436 ADGRB2O60241 1585 aa18.44■□□□□ 0.54
SRSF3-201ENST00000339436 ROBO1Q9Y6N7 1651 aa18.43■□□□□ 0.54
SRSF3-201ENST00000339436 NBPF1Q3BBV0 1214 aa18.43■□□□□ 0.54
SRSF3-201ENST00000339436 NBPF8Q3BBV2 869 aa18.43■□□□□ 0.54
SRSF3-201ENST00000339436 SIRT1Q96EB6 747 aa18.43■□□□□ 0.54
SRSF3-201ENST00000339436 C19orf44Q9H6X5 657 aa18.43■□□□□ 0.54
SRSF3-201ENST00000339436 FMN2Q9NZ56 1722 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms