RNA–Protein interactions for RNA: ENST00000338663.11

SLC3A2-201, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best) BASIC

Gene SLC3A2, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-201ENST00000338663 ARID4BQ4LE39 1312 aaPredicted RBP23.94■■□□□ 1.42
SLC3A2-201ENST00000338663 PPP6R1Q9UPN7 881 aa23.93■■□□□ 1.42
SLC3A2-201ENST00000338663 NRXN1Q9ULB1 1477 aa23.93■■□□□ 1.42
SLC3A2-201ENST00000338663 ANP32CO43423 234 aa23.92■■□□□ 1.42
SLC3A2-201ENST00000338663 ANP32EQ9BTT0 268 aa23.92■■□□□ 1.42
SLC3A2-201ENST00000338663 ST20-MTHFSA0A0A6YYL1 179 aa23.92■■□□□ 1.42
SLC3A2-201ENST00000338663 CCER2I3L3R5 266 aa23.9■■□□□ 1.42
SLC3A2-201ENST00000338663 ERVK-7P63135 1459 aa23.88■■□□□ 1.41
SLC3A2-201ENST00000338663 MYO5BQ9ULV0 1848 aa23.86■■□□□ 1.41
SLC3A2-201ENST00000338663 NEXMIFQ5QGS0 1516 aa23.85■■□□□ 1.41
SLC3A2-201ENST00000338663 TMEM131LA2VDJ0 1609 aa23.85■■□□□ 1.41
SLC3A2-201ENST00000338663 CHGAP10645 457 aaKnown RBP23.84■■□□□ 1.41
SLC3A2-201ENST00000338663 SCAF11Q99590 1463 aaKnown RBP23.84■■□□□ 1.41
SLC3A2-201ENST00000338663 SPATA31D1Q6ZQQ2 1576 aa23.84■■□□□ 1.41
SLC3A2-201ENST00000338663 RPGRIP1LQ68CZ1 1315 aa23.84■■□□□ 1.41
SLC3A2-201ENST00000338663 SLC52A1Q9NWF4 448 aa23.83■■□□□ 1.41
SLC3A2-201ENST00000338663 ADGRF5Q8IZF2 1346 aa23.83■■□□□ 1.41
SLC3A2-201ENST00000338663 SETBP1Q9Y6X0 1596 aa23.82■■□□□ 1.4
SLC3A2-201ENST00000338663 PIK3C2GO75747 1445 aa23.82■■□□□ 1.4
SLC3A2-201ENST00000338663 IDI1Q13907 227 aa23.78■■□□□ 1.4
SLC3A2-201ENST00000338663 NEFLP07196 543 aa23.78■■□□□ 1.4
SLC3A2-201ENST00000338663 MLECQ14165 292 aa23.78■■□□□ 1.4
SLC3A2-201ENST00000338663 TESK2Q96S53 571 aa23.78■■□□□ 1.4
SLC3A2-201ENST00000338663 TRHP20396 242 aaPredicted RBP23.77■■□□□ 1.4
SLC3A2-201ENST00000338663 POLR3GLQ9BT43 218 aa23.76■■□□□ 1.39
SLC3A2-201ENST00000338663 EIF3AQ14152 1382 aaKnown RBP23.76■■□□□ 1.39
SLC3A2-201ENST00000338663 MYO3AQ8NEV4 1616 aa23.75■■□□□ 1.39
SLC3A2-201ENST00000338663 FBXO31Q5XUX0 539 aaPredicted RBP23.75■■□□□ 1.39
SLC3A2-201ENST00000338663 CFAP70Q5T0N1 1121 aa23.74■■□□□ 1.39
SLC3A2-201ENST00000338663 DISP3Q9P2K9 1392 aa23.73■■□□□ 1.39
SLC3A2-201ENST00000338663 ZFYVE9O95405 1425 aa23.73■■□□□ 1.39
SLC3A2-201ENST00000338663 ADGRB1O14514 1584 aa23.73■■□□□ 1.39
SLC3A2-201ENST00000338663 FKBP8Q14318 412 aa23.72■■□□□ 1.39
SLC3A2-201ENST00000338663 DNAJC5Q9H3Z4 198 aa23.72■■□□□ 1.39
SLC3A2-201ENST00000338663 ESF1Q9H501 851 aaKnown RBP23.7■■□□□ 1.38
SLC3A2-201ENST00000338663 TMF1P82094 1093 aa23.69■■□□□ 1.38
SLC3A2-201ENST00000338663 VGFO15240 615 aaPredicted RBP23.69■■□□□ 1.38
SLC3A2-201ENST00000338663 PRKRIP1Q9H875 184 aaPredicted RBP23.69■■□□□ 1.38
SLC3A2-201ENST00000338663 ZMYM3Q14202 1370 aa23.68■■□□□ 1.38
SLC3A2-201ENST00000338663 C14orf93Q9H972 538 aaKnown RBP23.68■■□□□ 1.38
SLC3A2-201ENST00000338663 A2ML1A8K2U0 1454 aa23.65■■□□□ 1.38
SLC3A2-201ENST00000338663 KDM5AP29375 1690 aaKnown RBP23.65■■□□□ 1.38
SLC3A2-201ENST00000338663 FER1L4A9Z1Z3 1794 aa23.64■■□□□ 1.37
SLC3A2-201ENST00000338663 QRICH2Q9H0J4 1663 aa23.63■■□□□ 1.37
SLC3A2-201ENST00000338663 ARHGEF28Q8N1W1 1705 aaKnown RBP23.62■■□□□ 1.37
SLC3A2-201ENST00000338663 MYOM1P52179 1685 aa23.62■■□□□ 1.37
SLC3A2-201ENST00000338663 SBNO2Q9Y2G9 1366 aa23.61■■□□□ 1.37
SLC3A2-201ENST00000338663 NUTM2DQ5VT03 806 aaPredicted RBP23.6■■□□□ 1.37
SLC3A2-201ENST00000338663 ASXL1Q8IXJ9 1541 aa23.6■■□□□ 1.37
SLC3A2-201ENST00000338663 STAG3Q9UJ98 1225 aa23.59■■□□□ 1.37
SLC3A2-201ENST00000338663 C3P01024 1663 aa23.59■■□□□ 1.37
SLC3A2-201ENST00000338663 CDCA8Q53HL2 280 aa23.58■■□□□ 1.37
SLC3A2-201ENST00000338663 SLC24A1O60721 1099 aa23.57■■□□□ 1.36
SLC3A2-201ENST00000338663 TNRQ92752 1358 aa23.57■■□□□ 1.36
SLC3A2-201ENST00000338663 UBR1Q8IWV7 1749 aa23.57■■□□□ 1.36
SLC3A2-201ENST00000338663 BCANQ96GW7 911 aa23.56■■□□□ 1.36
SLC3A2-201ENST00000338663 RIMS2Q9UQ26 1411 aa23.54■■□□□ 1.36
SLC3A2-201ENST00000338663 CENPJQ9HC77 1338 aaPredicted RBP23.54■■□□□ 1.36
SLC3A2-201ENST00000338663 ALKQ9UM73 1620 aa23.54■■□□□ 1.36
SLC3A2-201ENST00000338663 RBM19Q9Y4C8 960 aaKnown RBP23.54■■□□□ 1.36
SLC3A2-201ENST00000338663 KTN1Q86UP2 1357 aaKnown RBP23.53■■□□□ 1.36
SLC3A2-201ENST00000338663 SETD1AO15047 1707 aaKnown RBP23.53■■□□□ 1.36
SLC3A2-201ENST00000338663 TMEM132EQ6IEE7 984 aa23.53■■□□□ 1.36
SLC3A2-201ENST00000338663 TRAK1Q9UPV9 953 aa23.51■■□□□ 1.35
SLC3A2-201ENST00000338663 ERICH6BQ5W0A0 696 aa23.5■■□□□ 1.35
SLC3A2-201ENST00000338663 NLRP1Q9C000 1473 aa23.5■■□□□ 1.35
SLC3A2-201ENST00000338663 PER1O15534 1290 aaPredicted RBP23.49■■□□□ 1.35
SLC3A2-201ENST00000338663 NRXN3Q9Y4C0 1643 aa23.49■■□□□ 1.35
SLC3A2-201ENST00000338663 CCDC184Q52MB2 194 aa23.48■■□□□ 1.35
SLC3A2-201ENST00000338663 PANK3Q9H999 370 aa23.47■■□□□ 1.35
SLC3A2-201ENST00000338663 MRS2Q9HD23 443 aa23.47■■□□□ 1.35
SLC3A2-201ENST00000338663 PARD3Q8TEW0 1356 aa23.45■■□□□ 1.34
SLC3A2-201ENST00000338663 RALBP1Q15311 655 aa23.45■■□□□ 1.34
SLC3A2-201ENST00000338663 PTPRMP28827 1452 aa23.45■■□□□ 1.34
SLC3A2-201ENST00000338663 YTHDC2Q9H6S0 1430 aaKnown RBP23.44■■□□□ 1.34
SLC3A2-201ENST00000338663 CNGB1Q14028 1251 aaPredicted RBP23.43■■□□□ 1.34
SLC3A2-201ENST00000338663 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.43■■□□□ 1.34
SLC3A2-201ENST00000338663 TULP4Q9NRJ4 1543 aa23.42■■□□□ 1.34
SLC3A2-201ENST00000338663 MYBBP1AQ9BQG0 1328 aaKnown RBP23.41■■□□□ 1.34
SLC3A2-201ENST00000338663 TMEM2Q9UHN6 1383 aa23.41■■□□□ 1.34
SLC3A2-201ENST00000338663 RIMS1Q86UR5 1692 aaKnown RBP23.4■■□□□ 1.34
SLC3A2-201ENST00000338663 FANCIQ9NVI1 1328 aa23.4■■□□□ 1.34
SLC3A2-201ENST00000338663 DLC1Q96QB1 1528 aa23.4■■□□□ 1.34
SLC3A2-201ENST00000338663 CEBPAP49715 358 aaPredicted RBP23.39■■□□□ 1.34
SLC3A2-201ENST00000338663 SENP3Q9H4L4 574 aaPredicted RBP23.39■■□□□ 1.33
SLC3A2-201ENST00000338663 KNDC1Q76NI1 1749 aa23.37■■□□□ 1.33
SLC3A2-201ENST00000338663 BRD4O60885 1362 aaPredicted RBP23.37■■□□□ 1.33
SLC3A2-201ENST00000338663 HDGFP51858 240 aaKnown RBP23.37■■□□□ 1.33
SLC3A2-201ENST00000338663 ADAMTSL3P82987 1691 aa23.36■■□□□ 1.33
SLC3A2-201ENST00000338663 STK26Q9P289 416 aa23.35■■□□□ 1.33
SLC3A2-201ENST00000338663 SLIT1O75093 1534 aa23.34■■□□□ 1.33
SLC3A2-201ENST00000338663 EVC2Q86UK5 1308 aa23.34■■□□□ 1.33
SLC3A2-201ENST00000338663 LRPPRCP42704 1394 aaKnown RBP23.34■■□□□ 1.33
SLC3A2-201ENST00000338663 KNSTRNQ9Y448 316 aa23.33■■□□□ 1.33
SLC3A2-201ENST00000338663 FAM9BQ8IZU0 186 aa23.33■■□□□ 1.32
SLC3A2-201ENST00000338663 PUS7Q96PZ0 661 aaKnown RBP23.33■■□□□ 1.32
SLC3A2-201ENST00000338663 CC2D1BQ5T0F9 858 aaKnown RBP23.32■■□□□ 1.32
SLC3A2-201ENST00000338663 NPC1L1Q9UHC9 1359 aa23.32■■□□□ 1.32
SLC3A2-201ENST00000338663 ARHGAP23Q9P227 1491 aa23.32■■□□□ 1.32
SLC3A2-201ENST00000338663 HNRNPUQ00839 825 aaKnown RBP eCLIP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms