RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 SLIT1O75093 1534 aa22.35■■□□□ 1.17
SEC13-201ENST00000337354 TMEM131LA2VDJ0 1609 aa22.34■■□□□ 1.17
SEC13-201ENST00000337354 LTKP29376 864 aa22.34■■□□□ 1.17
SEC13-201ENST00000337354 RGL3Q3MIN7 710 aa22.34■■□□□ 1.17
SEC13-201ENST00000337354 SPATA31E1Q6ZUB1 1445 aa22.33■■□□□ 1.17
SEC13-201ENST00000337354 SCAF11Q99590 1463 aaKnown RBP22.33■■□□□ 1.17
SEC13-201ENST00000337354 NPHP4O75161 1426 aaPredicted RBP22.33■■□□□ 1.16
SEC13-201ENST00000337354 RIMS2Q9UQ26 1411 aa22.32■■□□□ 1.16
SEC13-201ENST00000337354 VGFO15240 615 aaPredicted RBP22.31■■□□□ 1.16
SEC13-201ENST00000337354 STAC3Q96MF2 364 aa22.31■■□□□ 1.16
SEC13-201ENST00000337354 ZFYVE9O95405 1425 aa22.3■■□□□ 1.16
SEC13-201ENST00000337354 PPP1R15AO75807 674 aaPredicted RBP22.3■■□□□ 1.16
SEC13-201ENST00000337354 CCER1Q8TC90 406 aaPredicted RBP22.3■■□□□ 1.16
SEC13-201ENST00000337354 SIN3AQ96ST3 1273 aa22.3■■□□□ 1.16
SEC13-201ENST00000337354 MED14O60244 1454 aa22.3■■□□□ 1.16
SEC13-201ENST00000337354 NEUROD1Q13562 356 aa22.27■■□□□ 1.16
SEC13-201ENST00000337354 LTBP4Q8N2S1 1624 aa22.27■■□□□ 1.16
SEC13-201ENST00000337354 ZNF335Q9H4Z2 1342 aaPredicted RBP22.25■■□□□ 1.15
SEC13-201ENST00000337354 KIF1BO60333 1816 aa22.25■■□□□ 1.15
SEC13-201ENST00000337354 NUTM2DQ5VT03 806 aaPredicted RBP22.25■■□□□ 1.15
SEC13-201ENST00000337354 PLEKHG1Q9ULL1 1385 aa22.24■■□□□ 1.15
SEC13-201ENST00000337354 CERKQ8TCT0 537 aa22.23■■□□□ 1.15
SEC13-201ENST00000337354 BCANQ96GW7 911 aa22.23■■□□□ 1.15
SEC13-201ENST00000337354 DCAF11Q8TEB1 546 aa22.22■■□□□ 1.15
SEC13-201ENST00000337354 NEXMIFQ5QGS0 1516 aa22.2■■□□□ 1.14
SEC13-201ENST00000337354 TIMELESSQ9UNS1 1208 aa22.19■■□□□ 1.14
SEC13-201ENST00000337354 L3MBTL2Q969R5 705 aa22.18■■□□□ 1.14
SEC13-201ENST00000337354 TBX22Q9Y458 520 aa22.18■■□□□ 1.14
SEC13-201ENST00000337354 STRCP1A6NGW2 1772 aa22.17■■□□□ 1.14
SEC13-201ENST00000337354 CPS1P31327 1500 aa22.16■■□□□ 1.14
SEC13-201ENST00000337354 ADGRF5Q8IZF2 1346 aa22.16■■□□□ 1.14
SEC13-201ENST00000337354 KDM2AQ9Y2K7 1162 aa22.16■■□□□ 1.14
SEC13-201ENST00000337354 SLC26A8Q96RN1 970 aa22.15■■□□□ 1.14
SEC13-201ENST00000337354 TONSLQ96HA7 1378 aa22.15■■□□□ 1.14
SEC13-201ENST00000337354 ILDR1Q86SU0 546 aaPredicted RBP22.14■■□□□ 1.14
SEC13-201ENST00000337354 IQSEC2Q5JU85 1478 aa22.14■■□□□ 1.13
SEC13-201ENST00000337354 FBXO41Q8TF61 875 aa22.13■■□□□ 1.13
SEC13-201ENST00000337354 MYOM2P54296 1465 aa22.13■■□□□ 1.13
SEC13-201ENST00000337354 SENP3Q9H4L4 574 aaPredicted RBP22.12■■□□□ 1.13
SEC13-201ENST00000337354 ADAMTS13Q76LX8 1427 aa22.1■■□□□ 1.13
SEC13-201ENST00000337354 NRXN1Q9ULB1 1477 aa22.1■■□□□ 1.13
SEC13-201ENST00000337354 C14orf93Q9H972 538 aaKnown RBP22.1■■□□□ 1.13
SEC13-201ENST00000337354 PIK3C2GO75747 1445 aa22.09■■□□□ 1.13
SEC13-201ENST00000337354 SETBP1Q9Y6X0 1596 aa22.08■■□□□ 1.13
SEC13-201ENST00000337354 PIK3R4Q99570 1358 aa22.08■■□□□ 1.13
SEC13-201ENST00000337354 DIP2AQ14689 1571 aa22.07■■□□□ 1.12
SEC13-201ENST00000337354 PPLO60437 1756 aa22.07■■□□□ 1.12
SEC13-201ENST00000337354 KCNA6P17658 529 aa22.06■■□□□ 1.12
SEC13-201ENST00000337354 NWD1Q149M9 1564 aa22.05■■□□□ 1.12
SEC13-201ENST00000337354 CFAP70Q5T0N1 1121 aa22.04■■□□□ 1.12
SEC13-201ENST00000337354 CHD2O14647 1828 aaKnown RBP22.03■■□□□ 1.12
SEC13-201ENST00000337354 NRXN3Q9Y4C0 1643 aa22.02■■□□□ 1.12
SEC13-201ENST00000337354 IFT172Q9UG01 1749 aa22.02■■□□□ 1.12
SEC13-201ENST00000337354 METP08581 1390 aa22.02■■□□□ 1.12
SEC13-201ENST00000337354 LRRC7Q96NW7 1537 aa22.02■■□□□ 1.12
SEC13-201ENST00000337354 XIRP1Q702N8 1843 aaKnown RBP22.01■■□□□ 1.11
SEC13-201ENST00000337354 PRAG1Q86YV5 1406 aa22.01■■□□□ 1.11
SEC13-201ENST00000337354 AMOTL2Q9Y2J4 779 aa22■■□□□ 1.11
SEC13-201ENST00000337354 ALKQ9UM73 1620 aa22■■□□□ 1.11
SEC13-201ENST00000337354 NKTRP30414 1462 aaKnown RBP21.99■■□□□ 1.11
SEC13-201ENST00000337354 TMEM132EQ6IEE7 984 aa21.97■■□□□ 1.11
SEC13-201ENST00000337354 UBAP1LF5GYI3 381 aa21.96■■□□□ 1.11
SEC13-201ENST00000337354 NBPF8Q3BBV2 869 aa21.96■■□□□ 1.11
SEC13-201ENST00000337354 PTPRUQ92729 1446 aa21.94■■□□□ 1.1
SEC13-201ENST00000337354 LRPPRCP42704 1394 aaKnown RBP21.93■■□□□ 1.1
SEC13-201ENST00000337354 ABCC11Q96J66 1382 aa21.93■■□□□ 1.1
SEC13-201ENST00000337354 SIRT1Q96EB6 747 aa21.93■■□□□ 1.1
SEC13-201ENST00000337354 PROSER2Q86WR7 435 aaPredicted RBP21.92■■□□□ 1.1
SEC13-201ENST00000337354 SETD1AO15047 1707 aaKnown RBP21.92■■□□□ 1.1
SEC13-201ENST00000337354 NBPF1Q3BBV0 1214 aa21.91■■□□□ 1.1
SEC13-201ENST00000337354 XRN1Q8IZH2 1706 aaKnown RBP21.91■■□□□ 1.1
SEC13-201ENST00000337354 YTHDC2Q9H6S0 1430 aaKnown RBP21.9■■□□□ 1.1
SEC13-201ENST00000337354 STK26Q9P289 416 aa21.9■■□□□ 1.1
SEC13-201ENST00000337354 LAMC1P11047 1609 aa21.9■■□□□ 1.1
SEC13-201ENST00000337354 SCAF1Q9H7N4 1312 aaKnown RBP21.9■■□□□ 1.1
SEC13-201ENST00000337354 TMEM94Q12767 1356 aa21.89■■□□□ 1.1
SEC13-201ENST00000337354 ROCK2O75116 1388 aaKnown RBP21.87■■□□□ 1.09
SEC13-201ENST00000337354 TECPR2O15040 1411 aa21.87■■□□□ 1.09
SEC13-201ENST00000337354 NCOA3Q9Y6Q9 1424 aa21.87■■□□□ 1.09
SEC13-201ENST00000337354 ADGRB1O14514 1584 aa21.87■■□□□ 1.09
SEC13-201ENST00000337354 TOM1O60784 492 aa21.86■■□□□ 1.09
SEC13-201ENST00000337354 TRAK1Q9UPV9 953 aa21.86■■□□□ 1.09
SEC13-201ENST00000337354 PTCH1Q13635 1447 aa21.85■■□□□ 1.09
SEC13-201ENST00000337354 ASXL1Q8IXJ9 1541 aa21.85■■□□□ 1.09
SEC13-201ENST00000337354 RBM33Q96EV2 1170 aaKnown RBP21.85■■□□□ 1.09
SEC13-201ENST00000337354 GPRASP1Q5JY77 1395 aa21.84■■□□□ 1.09
SEC13-201ENST00000337354 ROBO2Q9HCK4 1378 aa21.84■■□□□ 1.09
SEC13-201ENST00000337354 PIP4K2BP78356 416 aa21.84■■□□□ 1.09
SEC13-201ENST00000337354 CARD11Q9BXL7 1154 aa21.84■■□□□ 1.09
SEC13-201ENST00000337354 KIAA1210Q9ULL0 1709 aa21.84■■□□□ 1.09
SEC13-201ENST00000337354 FAM135BQ49AJ0 1406 aa21.83■■□□□ 1.08
SEC13-201ENST00000337354 RALGAPBQ86X10 1494 aa21.82■■□□□ 1.08
SEC13-201ENST00000337354 C19orf44Q9H6X5 657 aa21.81■■□□□ 1.08
SEC13-201ENST00000337354 POGKQ9P215 609 aa21.81■■□□□ 1.08
SEC13-201ENST00000337354 MSH6P52701 1360 aa21.81■■□□□ 1.08
SEC13-201ENST00000337354 WAPLQ7Z5K2 1190 aa21.8■■□□□ 1.08
SEC13-201ENST00000337354 C14orf37Q86TY3 774 aa21.8■■□□□ 1.08
SEC13-201ENST00000337354 PRAM1Q96QH2 718 aa21.8■■□□□ 1.08
SEC13-201ENST00000337354 DLC1Q96QB1 1528 aa21.79■■□□□ 1.08
SEC13-201ENST00000337354 TRPM1Q7Z4N2 1603 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms