RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 NOP58Q9Y2X3 529 aaKnown RBP12.75□□□□□ -0.37
MSL3-202ENST00000337339 PAK3O75914 559 aaPredicted RBP12.74□□□□□ -0.37
MSL3-202ENST00000337339 ZCCHC11Q5TAX3 1644 aaKnown RBP12.74□□□□□ -0.37
MSL3-202ENST00000337339 ASXL2Q76L83 1435 aa12.74□□□□□ -0.37
MSL3-202ENST00000337339 WDR7Q9Y4E6 1490 aa12.74□□□□□ -0.37
MSL3-202ENST00000337339 RGS3P49796 1198 aa12.73□□□□□ -0.37
MSL3-202ENST00000337339 RNF123Q5XPI4 1314 aa12.73□□□□□ -0.37
MSL3-202ENST00000337339 MLECQ14165 292 aa12.72□□□□□ -0.37
MSL3-202ENST00000337339 FRAT1Q92837 279 aaPredicted RBP12.72□□□□□ -0.37
MSL3-202ENST00000337339 CENPJQ9HC77 1338 aaPredicted RBP12.72□□□□□ -0.37
MSL3-202ENST00000337339 MAST1Q9Y2H9 1570 aa12.72□□□□□ -0.37
MSL3-202ENST00000337339 UGGT1Q9NYU2 1555 aa12.72□□□□□ -0.37
MSL3-202ENST00000337339 CARD14Q9BXL6 1004 aa12.72□□□□□ -0.37
MSL3-202ENST00000337339 ATP10AO60312 1499 aa12.71□□□□□ -0.37
MSL3-202ENST00000337339 MAGI2Q86UL8 1455 aa12.71□□□□□ -0.37
MSL3-202ENST00000337339 ABCC1P33527 1531 aa12.71□□□□□ -0.37
MSL3-202ENST00000337339 TRPM1Q7Z4N2 1603 aa12.71□□□□□ -0.38
MSL3-202ENST00000337339 SCAF11Q99590 1463 aaKnown RBP12.71□□□□□ -0.38
MSL3-202ENST00000337339 SRPK2P78362 688 aaKnown RBP12.71□□□□□ -0.38
MSL3-202ENST00000337339 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.7□□□□□ -0.38
MSL3-202ENST00000337339 PDE4AP27815 886 aa12.69□□□□□ -0.38
MSL3-202ENST00000337339 CABP2Q9NPB3 220 aa12.69□□□□□ -0.38
MSL3-202ENST00000337339 POLR1AO95602 1720 aaPredicted RBP12.69□□□□□ -0.38
MSL3-202ENST00000337339 BCAR3O75815 825 aa12.69□□□□□ -0.38
MSL3-202ENST00000337339 UNC13BO14795 1591 aa12.69□□□□□ -0.38
MSL3-202ENST00000337339 CD109Q6YHK3 1445 aa12.69□□□□□ -0.38
MSL3-202ENST00000337339 STAC3Q96MF2 364 aa12.69□□□□□ -0.38
MSL3-202ENST00000337339 PLEKHH1Q9ULM0 1364 aa12.69□□□□□ -0.38
MSL3-202ENST00000337339 NOS1P29475 1434 aa12.68□□□□□ -0.38
MSL3-202ENST00000337339 BCL2L13Q9BXK5 485 aa12.68□□□□□ -0.38
MSL3-202ENST00000337339 SPINK5Q9NQ38 1064 aaPredicted RBP12.68□□□□□ -0.38
MSL3-202ENST00000337339 SHROOM2Q13796 1616 aa12.68□□□□□ -0.38
MSL3-202ENST00000337339 IQGAP3Q86VI3 1631 aa12.68□□□□□ -0.38
MSL3-202ENST00000337339 PPM1GO15355 546 aaPredicted RBP12.68□□□□□ -0.38
MSL3-202ENST00000337339 LAS1LQ9Y4W2 734 aaKnown RBP12.68□□□□□ -0.38
MSL3-202ENST00000337339 RTEL1-TNFRSF6BF6WH68 1400 aa12.68□□□□□ -0.38
MSL3-202ENST00000337339 U2SURPO15042 1029 aaKnown RBP12.68□□□□□ -0.38
MSL3-202ENST00000337339 CFAP65Q6ZU64 1925 aaKnown RBP12.67□□□□□ -0.38
MSL3-202ENST00000337339 DUSP27Q5VZP5 1158 aa12.67□□□□□ -0.38
MSL3-202ENST00000337339 IPO9Q96P70 1041 aaKnown RBP12.67□□□□□ -0.38
MSL3-202ENST00000337339 POGKQ9P215 609 aa12.67□□□□□ -0.38
MSL3-202ENST00000337339 PRDM15P57071 1507 aaPredicted RBP12.67□□□□□ -0.38
MSL3-202ENST00000337339 PLXNC1O60486 1568 aa12.67□□□□□ -0.38
MSL3-202ENST00000337339 TCERG1O14776 1098 aaKnown RBP12.66□□□□□ -0.38
MSL3-202ENST00000337339 RTL5Q5HYW3 569 aaPredicted RBP12.66□□□□□ -0.38
MSL3-202ENST00000337339 DAXXQ9UER7 740 aaPredicted RBP12.66□□□□□ -0.38
MSL3-202ENST00000337339 ATP7AQ04656 1500 aa12.66□□□□□ -0.38
MSL3-202ENST00000337339 UHRF1BP1LA0JNW5 1464 aa12.66□□□□□ -0.38
MSL3-202ENST00000337339 U2AF1L5P0DN76 240 aaPredicted RBP12.66□□□□□ -0.38
MSL3-202ENST00000337339 U2AF1Q01081 240 aaKnown RBP eCLIP12.66□□□□□ -0.38
MSL3-202ENST00000337339 MTHFSP49914 203 aa12.66□□□□□ -0.38
MSL3-202ENST00000337339 MINK1Q8N4C8 1332 aaPredicted RBP12.65□□□□□ -0.38
MSL3-202ENST00000337339 DMRT2Q9Y5R5 561 aa12.65□□□□□ -0.38
MSL3-202ENST00000337339 CLUAP1Q96AJ1 413 aa12.65□□□□□ -0.39
MSL3-202ENST00000337339 ZFYVE16Q7Z3T8 1539 aa12.65□□□□□ -0.39
MSL3-202ENST00000337339 EIF2AK4Q9P2K8 1649 aaKnown RBP12.64□□□□□ -0.39
MSL3-202ENST00000337339 VGFO15240 615 aaPredicted RBP12.63□□□□□ -0.39
MSL3-202ENST00000337339 IDI1Q13907 227 aa12.63□□□□□ -0.39
MSL3-202ENST00000337339 BCL11AQ9H165 835 aa12.63□□□□□ -0.39
MSL3-202ENST00000337339 SLFN5Q08AF3 891 aa12.63□□□□□ -0.39
MSL3-202ENST00000337339 CFAP53Q96M91 514 aa12.63□□□□□ -0.39
MSL3-202ENST00000337339 GGNBP2Q9H3C7 697 aa12.63□□□□□ -0.39
MSL3-202ENST00000337339 CLASP1Q7Z460 1538 aa12.63□□□□□ -0.39
MSL3-202ENST00000337339 SLC4A3P48751 1232 aa12.62□□□□□ -0.39
MSL3-202ENST00000337339 COG6Q9Y2V7 657 aa12.62□□□□□ -0.39
MSL3-202ENST00000337339 FBXO31Q5XUX0 539 aaPredicted RBP12.62□□□□□ -0.39
MSL3-202ENST00000337339 PTPRTO14522 1441 aa12.62□□□□□ -0.39
MSL3-202ENST00000337339 PANK1Q8TE04 598 aa12.62□□□□□ -0.39
MSL3-202ENST00000337339 E9PCH4 1651 aa12.62□□□□□ -0.39
MSL3-202ENST00000337339 NSD3Q9BZ95 1437 aa12.61□□□□□ -0.39
MSL3-202ENST00000337339 TCP11L2Q8N4U5 519 aa12.61□□□□□ -0.39
MSL3-202ENST00000337339 C14orf93Q9H972 538 aaKnown RBP12.61□□□□□ -0.39
MSL3-202ENST00000337339 CLTCL1P53675 1640 aa12.61□□□□□ -0.39
MSL3-202ENST00000337339 E9PSI1 815 aa12.6□□□□□ -0.39
MSL3-202ENST00000337339 FAM69CQ0P6D2 419 aa12.6□□□□□ -0.39
MSL3-202ENST00000337339 TRPM2O94759 1503 aa12.6□□□□□ -0.39
MSL3-202ENST00000337339 CGNL1Q0VF96 1302 aa12.6□□□□□ -0.39
MSL3-202ENST00000337339 EVC2Q86UK5 1308 aa12.6□□□□□ -0.39
MSL3-202ENST00000337339 ASXL1Q8IXJ9 1541 aa12.6□□□□□ -0.39
MSL3-202ENST00000337339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.59□□□□□ -0.39
MSL3-202ENST00000337339 BLMP54132 1417 aaPredicted RBP12.59□□□□□ -0.39
MSL3-202ENST00000337339 WWC1Q8IX03 1113 aa12.59□□□□□ -0.39
MSL3-202ENST00000337339 BACH2Q9BYV9 841 aa12.59□□□□□ -0.39
MSL3-202ENST00000337339 ZNF518AQ6AHZ1 1483 aa12.59□□□□□ -0.39
MSL3-202ENST00000337339 PRAM1Q96QH2 718 aa12.58□□□□□ -0.4
MSL3-202ENST00000337339 NPATQ14207 1427 aa12.57□□□□□ -0.4
MSL3-202ENST00000337339 FBLN1P23142 703 aa12.57□□□□□ -0.4
MSL3-202ENST00000337339 ESF1Q9H501 851 aaKnown RBP12.57□□□□□ -0.4
MSL3-202ENST00000337339 DEKP35659 375 aaKnown RBP12.56□□□□□ -0.4
MSL3-202ENST00000337339 CENPQQ7L2Z9 268 aaPredicted RBP12.56□□□□□ -0.4
MSL3-202ENST00000337339 RUNDC1Q96C34 613 aa12.56□□□□□ -0.4
MSL3-202ENST00000337339 MADDQ8WXG6 1647 aa12.56□□□□□ -0.4
MSL3-202ENST00000337339 ERVK-7P63135 1459 aa12.56□□□□□ -0.4
MSL3-202ENST00000337339 TSR2Q969E8 191 aaKnown RBP12.54□□□□□ -0.4
MSL3-202ENST00000337339 NEFMP07197 916 aa12.54□□□□□ -0.4
MSL3-202ENST00000337339 TNNQ9UQP3 1299 aa12.54□□□□□ -0.4
MSL3-202ENST00000337339 MAPK8IP3Q9UPT6 1336 aa12.54□□□□□ -0.4
MSL3-202ENST00000337339 NUTM2FA1L443 756 aa12.53□□□□□ -0.4
MSL3-202ENST00000337339 MS4A1P11836 297 aa12.53□□□□□ -0.4
MSL3-202ENST00000337339 ZMYM4Q5VZL5 1548 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 1187.5 ms