RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 VPS53Q5VIR6 699 aa15.06■□□□□ 0
FN1-202ENST00000336916 LAMC3Q9Y6N6 1575 aa15.05■□□□□ 0
FN1-202ENST00000336916 HSP90AB4PQ58FF6 505 aa15.05■□□□□ 0
FN1-202ENST00000336916 APBB1O00213 710 aa15.05■□□□□ 0
FN1-202ENST00000336916 TRIM29Q14134 588 aa15.05■□□□□ -0
FN1-202ENST00000336916 PRM3Q9NNZ6 103 aa15.05■□□□□ -0
FN1-202ENST00000336916 FAM184AQ8NB25 1140 aa15.05■□□□□ -0
FN1-202ENST00000336916 TOP2BQ02880 1626 aa15.05■□□□□ -0
FN1-202ENST00000336916 TRDNQ13061 729 aa15.04■□□□□ -0
FN1-202ENST00000336916 CENPQQ7L2Z9 268 aaPredicted RBP15.04■□□□□ -0
FN1-202ENST00000336916 POGZQ7Z3K3 1410 aa15.04■□□□□ -0
FN1-202ENST00000336916 USP47Q96K76 1375 aa15.04■□□□□ -0
FN1-202ENST00000336916 NCBP3Q53F19 620 aaKnown RBP15.04■□□□□ -0
FN1-202ENST00000336916 MRC2Q9UBG0 1479 aa15.03■□□□□ -0
FN1-202ENST00000336916 ZKSCAN1P17029 563 aaPredicted RBP15.03■□□□□ -0
FN1-202ENST00000336916 SKOR2Q2VWA4 1001 aaPredicted RBP15.03■□□□□ -0
FN1-202ENST00000336916 GOLGA6L19H0YKK7 550 aa15.02■□□□□ -0
FN1-202ENST00000336916 DNMBPQ6XZF7 1577 aa15.02□□□□□ -0.01
FN1-202ENST00000336916 CTTNBP2Q8WZ74 1663 aa15.02□□□□□ -0.01
FN1-202ENST00000336916 ERICH2A1L162 156 aa15.02□□□□□ -0.01
FN1-202ENST00000336916 KIF14Q15058 1648 aa15.01□□□□□ -0.01
FN1-202ENST00000336916 MFAP1P55081 439 aaKnown RBP15.01□□□□□ -0.01
FN1-202ENST00000336916 GPRASP1Q5JY77 1395 aa15.01□□□□□ -0.01
FN1-202ENST00000336916 DIAPH3Q9NSV4 1193 aa15.01□□□□□ -0.01
FN1-202ENST00000336916 DDX19BQ9UMR2 479 aa15.01□□□□□ -0.01
FN1-202ENST00000336916 IFT140Q96RY7 1462 aa15.01□□□□□ -0.01
FN1-202ENST00000336916 IPO7O95373 1038 aaKnown RBP15.01□□□□□ -0.01
FN1-202ENST00000336916 TOMM22Q9NS69 142 aa15□□□□□ -0.01
FN1-202ENST00000336916 TRAK1Q9UPV9 953 aa15□□□□□ -0.01
FN1-202ENST00000336916 ZKSCAN2Q63HK3 967 aa15□□□□□ -0.01
FN1-202ENST00000336916 L3MBTL2Q969R5 705 aa15□□□□□ -0.01
FN1-202ENST00000336916 NCAPD3P42695 1498 aa14.99□□□□□ -0.01
FN1-202ENST00000336916 LTV1Q96GA3 475 aaPredicted RBP14.98□□□□□ -0.01
FN1-202ENST00000336916 ERC2O15083 957 aa14.98□□□□□ -0.01
FN1-202ENST00000336916 API5Q9BZZ5 524 aaKnown RBP14.98□□□□□ -0.01
FN1-202ENST00000336916 CASKIN1Q8WXD9 1431 aa14.98□□□□□ -0.01
FN1-202ENST00000336916 CCDC43Q96MW1 224 aaKnown RBP14.98□□□□□ -0.01
FN1-202ENST00000336916 KANK4Q5T7N3 995 aaPredicted RBP14.97□□□□□ -0.01
FN1-202ENST00000336916 NINLQ9Y2I6 1382 aa14.97□□□□□ -0.01
FN1-202ENST00000336916 GPS2Q13227 327 aa14.97□□□□□ -0.01
FN1-202ENST00000336916 KRI1Q8N9T8 703 aaKnown RBP14.97□□□□□ -0.01
FN1-202ENST00000336916 CYB5RLQ6IPT4 315 aa14.97□□□□□ -0.01
FN1-202ENST00000336916 RAPGEF4Q8WZA2 1011 aa14.97□□□□□ -0.01
FN1-202ENST00000336916 RBM33Q96EV2 1170 aaKnown RBP14.96□□□□□ -0.01
FN1-202ENST00000336916 CWC22Q9HCG8 908 aaKnown RBP14.96□□□□□ -0.01
FN1-202ENST00000336916 SETD1BQ9UPS6 1966 aaKnown RBP14.96□□□□□ -0.01
FN1-202ENST00000336916 XBP1P17861 261 aa14.96□□□□□ -0.02
FN1-202ENST00000336916 ZBED9Q6R2W3 1325 aa14.96□□□□□ -0.02
FN1-202ENST00000336916 BRMS1Q9HCU9 246 aa14.95□□□□□ -0.02
FN1-202ENST00000336916 DIAPH1O60610 1272 aaKnown RBP14.95□□□□□ -0.02
FN1-202ENST00000336916 FGD6Q6ZV73 1430 aa14.95□□□□□ -0.02
FN1-202ENST00000336916 RDXP35241 583 aaKnown RBP14.95□□□□□ -0.02
FN1-202ENST00000336916 CCDC7Q96M83 1385 aa14.95□□□□□ -0.02
FN1-202ENST00000336916 SAFBQ15424 915 aaKnown RBP eCLIP14.94□□□□□ -0.02
FN1-202ENST00000336916 KIF21AQ7Z4S6 1674 aa14.94□□□□□ -0.02
FN1-202ENST00000336916 GOLGA6L3A6NEY3 463 aa14.94□□□□□ -0.02
FN1-202ENST00000336916 FAM69CQ0P6D2 419 aa14.94□□□□□ -0.02
FN1-202ENST00000336916 G3BP1Q13283 466 aaKnown RBP eCLIP14.94□□□□□ -0.022e-53■□□□□ 8.6
FN1-202ENST00000336916 IFIT2P09913 472 aaKnown RBP14.94□□□□□ -0.02
FN1-202ENST00000336916 LRRC9Q6ZRR7 1453 aa14.94□□□□□ -0.02
FN1-202ENST00000336916 MSH5O43196 834 aa14.93□□□□□ -0.02
FN1-202ENST00000336916 HFM1A2PYH4 1435 aa14.93□□□□□ -0.02
FN1-202ENST00000336916 SLC3A2P08195 630 aaKnown RBP14.93□□□□□ -0.02
FN1-202ENST00000336916 EPRSP07814 1512 aaKnown RBP14.93□□□□□ -0.02
FN1-202ENST00000336916 CPLX1O14810 134 aa14.93□□□□□ -0.02
FN1-202ENST00000336916 GNAI1P63096 354 aa14.93□□□□□ -0.02
FN1-202ENST00000336916 PANK3Q9H999 370 aa14.93□□□□□ -0.02
FN1-202ENST00000336916 IQGAP2Q13576 1575 aa14.93□□□□□ -0.02
FN1-202ENST00000336916 DAPK1P53355 1430 aa14.92□□□□□ -0.02
FN1-202ENST00000336916 HIP1O00291 1037 aa14.92□□□□□ -0.02
FN1-202ENST00000336916 BECN2A8MW95 431 aa14.91□□□□□ -0.02
FN1-202ENST00000336916 CNTLNQ9NXG0 1405 aa14.91□□□□□ -0.02
FN1-202ENST00000336916 ST20-MTHFSA0A0A6YYL1 179 aa14.91□□□□□ -0.02
FN1-202ENST00000336916 RILPL2Q969X0 211 aa14.91□□□□□ -0.02
FN1-202ENST00000336916 PES1O00541 588 aaKnown RBP14.9□□□□□ -0.02
FN1-202ENST00000336916 RUNDC1Q96C34 613 aa14.9□□□□□ -0.02
FN1-202ENST00000336916 ANKRD50Q9ULJ7 1429 aa14.9□□□□□ -0.02
FN1-202ENST00000336916 KIF6Q6ZMV9 814 aa14.89□□□□□ -0.03
FN1-202ENST00000336916 R3HCC1Q9Y3T6 440 aaKnown RBP14.89□□□□□ -0.03
FN1-202ENST00000336916 APPP05067 770 aa14.89□□□□□ -0.03
FN1-202ENST00000336916 ANKRD45Q5TZF3 282 aa14.89□□□□□ -0.03
FN1-202ENST00000336916 SYNJ1O43426 1573 aa14.89□□□□□ -0.03
FN1-202ENST00000336916 SETQ01105 290 aaPredicted RBP14.89□□□□□ -0.03
FN1-202ENST00000336916 WWC2Q6AWC2 1192 aa14.89□□□□□ -0.03
FN1-202ENST00000336916 SART3Q15020 963 aaKnown RBP14.89□□□□□ -0.03
FN1-202ENST00000336916 SPRYD3Q8NCJ5 442 aa14.89□□□□□ -0.03
FN1-202ENST00000336916 CNKSR2Q8WXI2 1034 aa14.88□□□□□ -0.03
FN1-202ENST00000336916 FAM161AQ3B820 660 aa14.88□□□□□ -0.03
FN1-202ENST00000336916 THEMISQ8N1K5 641 aaPredicted RBP14.88□□□□□ -0.03
FN1-202ENST00000336916 GAS2L2Q8NHY3 880 aa14.88□□□□□ -0.03
FN1-202ENST00000336916 SF3B2Q13435 895 aaKnown RBP14.87□□□□□ -0.03
FN1-202ENST00000336916 CREBRFQ8IUR6 639 aa14.87□□□□□ -0.03
FN1-202ENST00000336916 INTS3Q68E01 1043 aaKnown RBP14.87□□□□□ -0.03
FN1-202ENST00000336916 RALYLQ86SE5 291 aaKnown RBP14.87□□□□□ -0.03
FN1-202ENST00000336916 SYTL4Q96C24 671 aaPredicted RBP14.87□□□□□ -0.03
FN1-202ENST00000336916 SENP3-EIF4A1A0A087X0R7 540 aa14.87□□□□□ -0.03
FN1-202ENST00000336916 NAT10Q9H0A0 1025 aaKnown RBP14.87□□□□□ -0.03
FN1-202ENST00000336916 CCDC146Q8IYE0 955 aa14.87□□□□□ -0.03
FN1-202ENST00000336916 IPO9Q96P70 1041 aaKnown RBP14.87□□□□□ -0.03
FN1-202ENST00000336916 MINK1Q8N4C8 1332 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms