RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 CLTCL1P53675 1640 aa26.3■■□□□ 1.8
CDCA4-201ENST00000336219 NEFMP07197 916 aa26.29■■□□□ 1.8
CDCA4-201ENST00000336219 TET3O43151 1660 aa26.28■■□□□ 1.8
CDCA4-201ENST00000336219 AFAP1Q8N556 730 aa26.27■■□□□ 1.8
CDCA4-201ENST00000336219 SCAPERQ9BY12 1400 aa26.27■■□□□ 1.8
CDCA4-201ENST00000336219 SYNMO15061 1565 aa26.27■■□□□ 1.8
CDCA4-201ENST00000336219 SCAF11Q99590 1463 aaKnown RBP26.27■■□□□ 1.8
CDCA4-201ENST00000336219 STAC3Q96MF2 364 aa26.26■■□□□ 1.79
CDCA4-201ENST00000336219 MS4A1P11836 297 aa26.25■■□□□ 1.79
CDCA4-201ENST00000336219 C20orf194Q5TEA3 1177 aa26.25■■□□□ 1.79
CDCA4-201ENST00000336219 IL27Q8NEV9 243 aa26.24■■□□□ 1.79
CDCA4-201ENST00000336219 KNSTRNQ9Y448 316 aa26.24■■□□□ 1.79
CDCA4-201ENST00000336219 ADAMTS8Q9UP79 889 aa26.22■■□□□ 1.79
CDCA4-201ENST00000336219 INO80Q9ULG1 1556 aaPredicted RBP26.22■■□□□ 1.79
CDCA4-201ENST00000336219 VWDEQ8N2E2 1590 aa26.21■■□□□ 1.79
CDCA4-201ENST00000336219 MYOM1P52179 1685 aa26.21■■□□□ 1.79
CDCA4-201ENST00000336219 PPP2R1AP30153 589 aa26.21■■□□□ 1.79
CDCA4-201ENST00000336219 CDCA8Q53HL2 280 aa26.21■■□□□ 1.79
CDCA4-201ENST00000336219 AMER1Q5JTC6 1135 aaPredicted RBP26.21■■□□□ 1.79
CDCA4-201ENST00000336219 KIAA1210Q9ULL0 1709 aa26.21■■□□□ 1.79
CDCA4-201ENST00000336219 ATP7AQ04656 1500 aa26.2■■□□□ 1.78
CDCA4-201ENST00000336219 ABCA9Q8IUA7 1624 aa26.19■■□□□ 1.78
CDCA4-201ENST00000336219 ASXL1Q8IXJ9 1541 aa26.18■■□□□ 1.78
CDCA4-201ENST00000336219 NEURL4Q96JN8 1562 aa26.17■■□□□ 1.78
CDCA4-201ENST00000336219 RTN4Q9NQC3 1192 aaKnown RBP26.17■■□□□ 1.78
CDCA4-201ENST00000336219 KANK1Q14678 1352 aa26.16■■□□□ 1.78
CDCA4-201ENST00000336219 EIF3AQ14152 1382 aaKnown RBP26.15■■□□□ 1.78
CDCA4-201ENST00000336219 FANCAO15360 1455 aa26.15■■□□□ 1.78
CDCA4-201ENST00000336219 SLC4A3P48751 1232 aa26.14■■□□□ 1.78
CDCA4-201ENST00000336219 KDM5AP29375 1690 aaKnown RBP26.14■■□□□ 1.78
CDCA4-201ENST00000336219 WDR43Q15061 677 aaKnown RBP eCLIP26.14■■□□□ 1.77
CDCA4-201ENST00000336219 PIK3C2GO75747 1445 aa26.13■■□□□ 1.77
CDCA4-201ENST00000336219 PLEKHH1Q9ULM0 1364 aa26.13■■□□□ 1.77
CDCA4-201ENST00000336219 NPC1L1Q9UHC9 1359 aa26.12■■□□□ 1.77
CDCA4-201ENST00000336219 MROH1Q8NDA8 1641 aa26.11■■□□□ 1.77
CDCA4-201ENST00000336219 MAP3K4Q9Y6R4 1608 aa26.11■■□□□ 1.77
CDCA4-201ENST00000336219 ZNF521Q96K83 1311 aa26.09■■□□□ 1.77
CDCA4-201ENST00000336219 KIF3BO15066 747 aa26.09■■□□□ 1.77
CDCA4-201ENST00000336219 ABCA6Q8N139 1617 aa26.08■■□□□ 1.77
CDCA4-201ENST00000336219 MYOM2P54296 1465 aa26.08■■□□□ 1.77
CDCA4-201ENST00000336219 KIF1BO60333 1816 aa26.08■■□□□ 1.77
CDCA4-201ENST00000336219 DUSP27Q5VZP5 1158 aa26.08■■□□□ 1.76
CDCA4-201ENST00000336219 USP35Q9P2H5 1018 aa26.08■■□□□ 1.76
CDCA4-201ENST00000336219 PPM1GO15355 546 aaPredicted RBP26.07■■□□□ 1.76
CDCA4-201ENST00000336219 UGGT1Q9NYU2 1555 aa26.07■■□□□ 1.76
CDCA4-201ENST00000336219 ADGRL1O94910 1474 aa26.07■■□□□ 1.76
CDCA4-201ENST00000336219 ANO8Q9HCE9 1232 aaPredicted RBP26.07■■□□□ 1.76
CDCA4-201ENST00000336219 KDM2BQ8NHM5 1336 aa26.06■■□□□ 1.76
CDCA4-201ENST00000336219 IFT172Q9UG01 1749 aa26.06■■□□□ 1.76
CDCA4-201ENST00000336219 ERVK-7P63135 1459 aa26.03■■□□□ 1.76
CDCA4-201ENST00000336219 GOLGA2Q08379 1002 aa26.03■■□□□ 1.76
CDCA4-201ENST00000336219 EFCAB6Q5THR3 1501 aa26.03■■□□□ 1.76
CDCA4-201ENST00000336219 CFAP70Q5T0N1 1121 aa26.03■■□□□ 1.76
CDCA4-201ENST00000336219 DDRGK1Q96HY6 314 aa26.03■■□□□ 1.76
CDCA4-201ENST00000336219 SLC24A1O60721 1099 aa26.01■■□□□ 1.75
CDCA4-201ENST00000336219 MROH2AA6NES4 1674 aa26■■□□□ 1.75
CDCA4-201ENST00000336219 ADGRF5Q8IZF2 1346 aa26■■□□□ 1.75
CDCA4-201ENST00000336219 KIDINS220Q9ULH0 1771 aa25.99■■□□□ 1.75
CDCA4-201ENST00000336219 PPRC1Q5VV67 1664 aaKnown RBP25.98■■□□□ 1.75
CDCA4-201ENST00000336219 MYO3AQ8NEV4 1616 aa25.98■■□□□ 1.75
CDCA4-201ENST00000336219 SLFN5Q08AF3 891 aa25.97■■□□□ 1.75
CDCA4-201ENST00000336219 NFKBIBQ15653 356 aa25.97■■□□□ 1.75
CDCA4-201ENST00000336219 CENPQQ7L2Z9 268 aaPredicted RBP25.96■■□□□ 1.75
CDCA4-201ENST00000336219 NRXN1Q9ULB1 1477 aa25.96■■□□□ 1.75
CDCA4-201ENST00000336219 C8orf34Q49A92 452 aa25.95■■□□□ 1.75
CDCA4-201ENST00000336219 RGS3P49796 1198 aa25.94■■□□□ 1.74
CDCA4-201ENST00000336219 CCDC146Q8IYE0 955 aa25.94■■□□□ 1.74
CDCA4-201ENST00000336219 TRMT2AQ8IZ69 625 aaKnown RBP25.94■■□□□ 1.74
CDCA4-201ENST00000336219 LMTK2Q8IWU2 1503 aa25.94■■□□□ 1.74
CDCA4-201ENST00000336219 CARD14Q9BXL6 1004 aa25.92■■□□□ 1.74
CDCA4-201ENST00000336219 SBNO2Q9Y2G9 1366 aa25.92■■□□□ 1.74
CDCA4-201ENST00000336219 ASXL2Q76L83 1435 aa25.92■■□□□ 1.74
CDCA4-201ENST00000336219 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.92■■□□□ 1.74
CDCA4-201ENST00000336219 BRPF3Q9ULD4 1205 aa25.91■■□□□ 1.74
CDCA4-201ENST00000336219 FAM161AQ3B820 660 aa25.91■■□□□ 1.74
CDCA4-201ENST00000336219 ADGRB3O60242 1522 aa25.9■■□□□ 1.74
CDCA4-201ENST00000336219 SPINK5Q9NQ38 1064 aaPredicted RBP25.9■■□□□ 1.74
CDCA4-201ENST00000336219 APAF1O14727 1248 aa25.9■■□□□ 1.74
CDCA4-201ENST00000336219 SETBP1Q9Y6X0 1596 aa25.89■■□□□ 1.74
CDCA4-201ENST00000336219 GSE1Q14687 1217 aa25.89■■□□□ 1.73
CDCA4-201ENST00000336219 DAXXQ9UER7 740 aaPredicted RBP25.89■■□□□ 1.73
CDCA4-201ENST00000336219 NKTRP30414 1462 aaKnown RBP25.89■■□□□ 1.73
CDCA4-201ENST00000336219 ZNF518AQ6AHZ1 1483 aa25.87■■□□□ 1.73
CDCA4-201ENST00000336219 NOS1P29475 1434 aa25.87■■□□□ 1.73
CDCA4-201ENST00000336219 FRAT1Q92837 279 aaPredicted RBP25.85■■□□□ 1.73
CDCA4-201ENST00000336219 BCAR3O75815 825 aa25.85■■□□□ 1.73
CDCA4-201ENST00000336219 ZC3H13Q5T200 1668 aaKnown RBP25.84■■□□□ 1.73
CDCA4-201ENST00000336219 PPLO60437 1756 aa25.84■■□□□ 1.73
CDCA4-201ENST00000336219 CENPJQ9HC77 1338 aaPredicted RBP25.83■■□□□ 1.73
CDCA4-201ENST00000336219 E9PSI1 815 aa25.83■■□□□ 1.73
CDCA4-201ENST00000336219 NGEFQ8N5V2 710 aa25.83■■□□□ 1.73
CDCA4-201ENST00000336219 POLR3AO14802 1390 aaPredicted RBP25.82■■□□□ 1.72
CDCA4-201ENST00000336219 CFAP65Q6ZU64 1925 aaKnown RBP25.81■■□□□ 1.72
CDCA4-201ENST00000336219 QRICH2Q9H0J4 1663 aa25.81■■□□□ 1.72
CDCA4-201ENST00000336219 DMRT2Q9Y5R5 561 aa25.8■■□□□ 1.72
CDCA4-201ENST00000336219 NPATQ14207 1427 aa25.79■■□□□ 1.72
CDCA4-201ENST00000336219 FRAT2O75474 233 aaPredicted RBP25.79■■□□□ 1.72
CDCA4-201ENST00000336219 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.79■■□□□ 1.72
CDCA4-201ENST00000336219 SHPRHQ149N8 1683 aa25.78■■□□□ 1.72
CDCA4-201ENST00000336219 FRMPD1Q5SYB0 1578 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms