RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 ZEB1P37275 1124 aaPredicted RBP19.71■□□□□ 0.75
TUBA1B-202ENST00000336023 HDGFP51858 240 aaKnown RBP19.71■□□□□ 0.75
TUBA1B-202ENST00000336023 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.71■□□□□ 0.75
TUBA1B-202ENST00000336023 ZFYVE9O95405 1425 aa19.71■□□□□ 0.75
TUBA1B-202ENST00000336023 VGFO15240 615 aaPredicted RBP19.7■□□□□ 0.74
TUBA1B-202ENST00000336023 MYO5BQ9ULV0 1848 aa19.7■□□□□ 0.74
TUBA1B-202ENST00000336023 LMTK3Q96Q04 1460 aa19.7■□□□□ 0.74
TUBA1B-202ENST00000336023 PPP1R15AO75807 674 aaPredicted RBP19.69■□□□□ 0.74
TUBA1B-202ENST00000336023 LTKP29376 864 aa19.69■□□□□ 0.74
TUBA1B-202ENST00000336023 TXNDC2Q86VQ3 553 aa19.69■□□□□ 0.74
TUBA1B-202ENST00000336023 EID1Q9Y6B2 187 aa19.69■□□□□ 0.74
TUBA1B-202ENST00000336023 NEXMIFQ5QGS0 1516 aa19.69■□□□□ 0.74
TUBA1B-202ENST00000336023 ARHGAP23Q9P227 1491 aa19.69■□□□□ 0.74
TUBA1B-202ENST00000336023 SLIT1O75093 1534 aa19.69■□□□□ 0.74
TUBA1B-202ENST00000336023 HSPA2P54652 639 aa19.69■□□□□ 0.74
TUBA1B-202ENST00000336023 ADGRF5Q8IZF2 1346 aa19.68■□□□□ 0.74
TUBA1B-202ENST00000336023 ANKLE2Q86XL3 938 aa19.67■□□□□ 0.74
TUBA1B-202ENST00000336023 AEBP2Q6ZN18 517 aaPredicted RBP19.66■□□□□ 0.74
TUBA1B-202ENST00000336023 MYOM2P54296 1465 aa19.65■□□□□ 0.74
TUBA1B-202ENST00000336023 NBPF8Q3BBV2 869 aa19.64■□□□□ 0.73
TUBA1B-202ENST00000336023 SENP3Q9H4L4 574 aaPredicted RBP19.64■□□□□ 0.73
TUBA1B-202ENST00000336023 PPLO60437 1756 aa19.63■□□□□ 0.73
TUBA1B-202ENST00000336023 SCAF11Q99590 1463 aaKnown RBP19.63■□□□□ 0.73
TUBA1B-202ENST00000336023 PRAG1Q86YV5 1406 aa19.62■□□□□ 0.73
TUBA1B-202ENST00000336023 IFT172Q9UG01 1749 aa19.62■□□□□ 0.73
TUBA1B-202ENST00000336023 NRXN1Q9ULB1 1477 aa19.61■□□□□ 0.73
TUBA1B-202ENST00000336023 NCKAP5LQ9HCH0 1330 aa19.61■□□□□ 0.73
TUBA1B-202ENST00000336023 PLEKHG1Q9ULL1 1385 aa19.6■□□□□ 0.73
TUBA1B-202ENST00000336023 BCANQ96GW7 911 aa19.6■□□□□ 0.73
TUBA1B-202ENST00000336023 PIK3C2GO75747 1445 aa19.59■□□□□ 0.73
TUBA1B-202ENST00000336023 CFAP70Q5T0N1 1121 aa19.58■□□□□ 0.72
TUBA1B-202ENST00000336023 C14orf93Q9H972 538 aaKnown RBP19.57■□□□□ 0.72
TUBA1B-202ENST00000336023 MED14O60244 1454 aa19.54■□□□□ 0.72
TUBA1B-202ENST00000336023 NPHP4O75161 1426 aaPredicted RBP19.54■□□□□ 0.72
TUBA1B-202ENST00000336023 NBPF1Q3BBV0 1214 aa19.54■□□□□ 0.72
TUBA1B-202ENST00000336023 SLC26A8Q96RN1 970 aa19.54■□□□□ 0.72
TUBA1B-202ENST00000336023 SETBP1Q9Y6X0 1596 aa19.53■□□□□ 0.72
TUBA1B-202ENST00000336023 ADAMTS13Q76LX8 1427 aa19.52■□□□□ 0.72
TUBA1B-202ENST00000336023 TBX22Q9Y458 520 aa19.51■□□□□ 0.71
TUBA1B-202ENST00000336023 ROCK2O75116 1388 aaKnown RBP19.51■□□□□ 0.71
TUBA1B-202ENST00000336023 TMEM132EQ6IEE7 984 aa19.51■□□□□ 0.71
TUBA1B-202ENST00000336023 RALGAPBQ86X10 1494 aa19.5■□□□□ 0.71
TUBA1B-202ENST00000336023 ALKQ9UM73 1620 aa19.5■□□□□ 0.71
TUBA1B-202ENST00000336023 NRXN3Q9Y4C0 1643 aa19.49■□□□□ 0.71
TUBA1B-202ENST00000336023 POLR1AO95602 1720 aaPredicted RBP19.48■□□□□ 0.71
TUBA1B-202ENST00000336023 METP08581 1390 aa19.48■□□□□ 0.71
TUBA1B-202ENST00000336023 CARD11Q9BXL7 1154 aa19.47■□□□□ 0.71
TUBA1B-202ENST00000336023 TRPM1Q7Z4N2 1603 aa19.47■□□□□ 0.71
TUBA1B-202ENST00000336023 IQGAP1P46940 1657 aa19.46■□□□□ 0.71
TUBA1B-202ENST00000336023 GPRASP1Q5JY77 1395 aa19.46■□□□□ 0.71
TUBA1B-202ENST00000336023 STRCQ7RTU9 1775 aa19.46■□□□□ 0.71
TUBA1B-202ENST00000336023 DMRT2Q9Y5R5 561 aa19.45■□□□□ 0.7
TUBA1B-202ENST00000336023 KIAA1210Q9ULL0 1709 aa19.45■□□□□ 0.7
TUBA1B-202ENST00000336023 LAMC1P11047 1609 aa19.44■□□□□ 0.7
TUBA1B-202ENST00000336023 ADGRB1O14514 1584 aa19.44■□□□□ 0.7
TUBA1B-202ENST00000336023 DIP2AQ14689 1571 aa19.44■□□□□ 0.7
TUBA1B-202ENST00000336023 ASXL1Q8IXJ9 1541 aa19.43■□□□□ 0.7
TUBA1B-202ENST00000336023 STK26Q9P289 416 aa19.43■□□□□ 0.7
TUBA1B-202ENST00000336023 PIK3R4Q99570 1358 aa19.41■□□□□ 0.7
TUBA1B-202ENST00000336023 YTHDC2Q9H6S0 1430 aaKnown RBP19.41■□□□□ 0.7
TUBA1B-202ENST00000336023 SETD1AO15047 1707 aaKnown RBP19.41■□□□□ 0.7
TUBA1B-202ENST00000336023 LRPPRCP42704 1394 aaKnown RBP19.4■□□□□ 0.7
TUBA1B-202ENST00000336023 TRAK1Q9UPV9 953 aa19.4■□□□□ 0.7
TUBA1B-202ENST00000336023 AMOTL2Q9Y2J4 779 aa19.4■□□□□ 0.7
TUBA1B-202ENST00000336023 PTPRUQ92729 1446 aa19.39■□□□□ 0.69
TUBA1B-202ENST00000336023 ABCC11Q96J66 1382 aa19.38■□□□□ 0.69
TUBA1B-202ENST00000336023 USP47Q96K76 1375 aa19.37■□□□□ 0.69
TUBA1B-202ENST00000336023 KCNA6P17658 529 aa19.36■□□□□ 0.69
TUBA1B-202ENST00000336023 EIF4G2P78344 907 aaKnown RBP eCLIP19.36■□□□□ 0.69
TUBA1B-202ENST00000336023 TECPR2O15040 1411 aa19.33■□□□□ 0.69
TUBA1B-202ENST00000336023 HSPA5P11021 654 aaKnown RBP19.33■□□□□ 0.69
TUBA1B-202ENST00000336023 SIRT1Q96EB6 747 aa19.33■□□□□ 0.68
TUBA1B-202ENST00000336023 PRAM1Q96QH2 718 aa19.33■□□□□ 0.68
TUBA1B-202ENST00000336023 EIF3AQ14152 1382 aaKnown RBP19.32■□□□□ 0.68
TUBA1B-202ENST00000336023 ROBO2Q9HCK4 1378 aa19.32■□□□□ 0.68
TUBA1B-202ENST00000336023 ST20-MTHFSA0A0A6YYL1 179 aa19.32■□□□□ 0.68
TUBA1B-202ENST00000336023 WAPLQ7Z5K2 1190 aa19.32■□□□□ 0.68
TUBA1B-202ENST00000336023 ZNF335Q9H4Z2 1342 aaPredicted RBP19.31■□□□□ 0.68
TUBA1B-202ENST00000336023 POGKQ9P215 609 aa19.31■□□□□ 0.68
TUBA1B-202ENST00000336023 HIRIP3Q9BW71 556 aaPredicted RBP19.3■□□□□ 0.68
TUBA1B-202ENST00000336023 DLC1Q96QB1 1528 aa19.3■□□□□ 0.68
TUBA1B-202ENST00000336023 CENPJQ9HC77 1338 aaPredicted RBP19.3■□□□□ 0.68
TUBA1B-202ENST00000336023 SAFB2Q14151 953 aaKnown RBP eCLIP19.29■□□□□ 0.68
TUBA1B-202ENST00000336023 PTCH1Q13635 1447 aa19.29■□□□□ 0.68
TUBA1B-202ENST00000336023 FAM135BQ49AJ0 1406 aa19.29■□□□□ 0.68
TUBA1B-202ENST00000336023 CHD2O14647 1828 aaKnown RBP19.29■□□□□ 0.68
TUBA1B-202ENST00000336023 XRN1Q8IZH2 1706 aaKnown RBP19.28■□□□□ 0.68
TUBA1B-202ENST00000336023 PLEKHH1Q9ULM0 1364 aa19.28■□□□□ 0.68
TUBA1B-202ENST00000336023 CPS1P31327 1500 aa19.27■□□□□ 0.68
TUBA1B-202ENST00000336023 NWD1Q149M9 1564 aa19.27■□□□□ 0.68
TUBA1B-202ENST00000336023 PROSER2Q86WR7 435 aaPredicted RBP19.26■□□□□ 0.67
TUBA1B-202ENST00000336023 TESK2Q96S53 571 aa19.25■□□□□ 0.67
TUBA1B-202ENST00000336023 KNDC1Q76NI1 1749 aa19.25■□□□□ 0.67
TUBA1B-202ENST00000336023 NKTRP30414 1462 aaKnown RBP19.25■□□□□ 0.67
TUBA1B-202ENST00000336023 RBM33Q96EV2 1170 aaKnown RBP19.25■□□□□ 0.67
TUBA1B-202ENST00000336023 ARHGEF28Q8N1W1 1705 aaKnown RBP19.24■□□□□ 0.67
TUBA1B-202ENST00000336023 MINK1Q8N4C8 1332 aaPredicted RBP19.22■□□□□ 0.67
TUBA1B-202ENST00000336023 STRCP1A6NGW2 1772 aa19.21■□□□□ 0.67
TUBA1B-202ENST00000336023 TMEM94Q12767 1356 aa19.21■□□□□ 0.67
TUBA1B-202ENST00000336023 SBNO2Q9Y2G9 1366 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms