RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 ANKLE2Q86XL3 938 aa20.43■□□□□ 0.86
APOBEC3B-202ENST00000335760 ZFYVE9O95405 1425 aa20.43■□□□□ 0.86
APOBEC3B-202ENST00000335760 NCKAP5LQ9HCH0 1330 aa20.42■□□□□ 0.86
APOBEC3B-202ENST00000335760 HDGFP51858 240 aaKnown RBP20.42■□□□□ 0.86
APOBEC3B-202ENST00000335760 NUTM2DQ5VT03 806 aaPredicted RBP20.42■□□□□ 0.86
APOBEC3B-202ENST00000335760 RPGRIP1LQ68CZ1 1315 aa20.42■□□□□ 0.86
APOBEC3B-202ENST00000335760 NEXMIFQ5QGS0 1516 aa20.41■□□□□ 0.86
APOBEC3B-202ENST00000335760 LTKP29376 864 aa20.41■□□□□ 0.86
APOBEC3B-202ENST00000335760 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.41■□□□□ 0.86
APOBEC3B-202ENST00000335760 POLR1AO95602 1720 aaPredicted RBP20.4■□□□□ 0.86
APOBEC3B-202ENST00000335760 PPP1R15AO75807 674 aaPredicted RBP20.4■□□□□ 0.86
APOBEC3B-202ENST00000335760 SCAF11Q99590 1463 aaKnown RBP20.4■□□□□ 0.86
APOBEC3B-202ENST00000335760 PPLO60437 1756 aa20.39■□□□□ 0.85
APOBEC3B-202ENST00000335760 STRCQ7RTU9 1775 aa20.39■□□□□ 0.85
APOBEC3B-202ENST00000335760 IFT172Q9UG01 1749 aa20.37■□□□□ 0.85
APOBEC3B-202ENST00000335760 VGFO15240 615 aaPredicted RBP20.35■□□□□ 0.85
APOBEC3B-202ENST00000335760 DCAF11Q8TEB1 546 aa20.35■□□□□ 0.85
APOBEC3B-202ENST00000335760 SENP3Q9H4L4 574 aaPredicted RBP20.35■□□□□ 0.85
APOBEC3B-202ENST00000335760 KDM2AQ9Y2K7 1162 aa20.34■□□□□ 0.85
APOBEC3B-202ENST00000335760 TONSLQ96HA7 1378 aa20.34■□□□□ 0.85
APOBEC3B-202ENST00000335760 NPHP4O75161 1426 aaPredicted RBP20.34■□□□□ 0.85
APOBEC3B-202ENST00000335760 L3MBTL2Q969R5 705 aa20.34■□□□□ 0.85
APOBEC3B-202ENST00000335760 BCANQ96GW7 911 aa20.34■□□□□ 0.85
APOBEC3B-202ENST00000335760 MED14O60244 1454 aa20.33■□□□□ 0.84
APOBEC3B-202ENST00000335760 PLEKHG1Q9ULL1 1385 aa20.33■□□□□ 0.84
APOBEC3B-202ENST00000335760 ADGRF5Q8IZF2 1346 aa20.32■□□□□ 0.84
APOBEC3B-202ENST00000335760 IQGAP1P46940 1657 aa20.31■□□□□ 0.84
APOBEC3B-202ENST00000335760 MYOM2P54296 1465 aa20.3■□□□□ 0.84
APOBEC3B-202ENST00000335760 STAC3Q96MF2 364 aa20.29■□□□□ 0.84
APOBEC3B-202ENST00000335760 DMRT2Q9Y5R5 561 aa20.29■□□□□ 0.84
APOBEC3B-202ENST00000335760 SLC26A8Q96RN1 970 aa20.26■□□□□ 0.83
APOBEC3B-202ENST00000335760 SETBP1Q9Y6X0 1596 aa20.26■□□□□ 0.83
APOBEC3B-202ENST00000335760 NRXN3Q9Y4C0 1643 aa20.26■□□□□ 0.83
APOBEC3B-202ENST00000335760 NRXN1Q9ULB1 1477 aa20.25■□□□□ 0.83
APOBEC3B-202ENST00000335760 PIK3C2GO75747 1445 aa20.24■□□□□ 0.83
APOBEC3B-202ENST00000335760 TIMELESSQ9UNS1 1208 aa20.24■□□□□ 0.83
APOBEC3B-202ENST00000335760 ADAMTS13Q76LX8 1427 aa20.24■□□□□ 0.83
APOBEC3B-202ENST00000335760 TBX22Q9Y458 520 aa20.22■□□□□ 0.83
APOBEC3B-202ENST00000335760 ALKQ9UM73 1620 aa20.22■□□□□ 0.83
APOBEC3B-202ENST00000335760 PRAG1Q86YV5 1406 aa20.21■□□□□ 0.83
APOBEC3B-202ENST00000335760 DIP2AQ14689 1571 aa20.21■□□□□ 0.83
APOBEC3B-202ENST00000335760 CFAP70Q5T0N1 1121 aa20.2■□□□□ 0.82
APOBEC3B-202ENST00000335760 C14orf93Q9H972 538 aaKnown RBP20.19■□□□□ 0.82
APOBEC3B-202ENST00000335760 SETD1AO15047 1707 aaKnown RBP20.18■□□□□ 0.82
APOBEC3B-202ENST00000335760 NBPF8Q3BBV2 869 aa20.17■□□□□ 0.82
APOBEC3B-202ENST00000335760 LAMC1P11047 1609 aa20.17■□□□□ 0.82
APOBEC3B-202ENST00000335760 METP08581 1390 aa20.16■□□□□ 0.82
APOBEC3B-202ENST00000335760 TMEM132EQ6IEE7 984 aa20.14■□□□□ 0.81
APOBEC3B-202ENST00000335760 KIAA1210Q9ULL0 1709 aa20.14■□□□□ 0.81
APOBEC3B-202ENST00000335760 ZNF335Q9H4Z2 1342 aaPredicted RBP20.13■□□□□ 0.81
APOBEC3B-202ENST00000335760 PIK3R4Q99570 1358 aa20.13■□□□□ 0.81
APOBEC3B-202ENST00000335760 CHD2O14647 1828 aaKnown RBP20.12■□□□□ 0.81
APOBEC3B-202ENST00000335760 ASXL1Q8IXJ9 1541 aa20.12■□□□□ 0.81
APOBEC3B-202ENST00000335760 TRPM1Q7Z4N2 1603 aa20.12■□□□□ 0.81
APOBEC3B-202ENST00000335760 KCNA6P17658 529 aa20.11■□□□□ 0.81
APOBEC3B-202ENST00000335760 PTPRUQ92729 1446 aa20.11■□□□□ 0.81
APOBEC3B-202ENST00000335760 NBPF1Q3BBV0 1214 aa20.1■□□□□ 0.81
APOBEC3B-202ENST00000335760 AMOTL2Q9Y2J4 779 aa20.1■□□□□ 0.81
APOBEC3B-202ENST00000335760 STRCP1A6NGW2 1772 aa20.09■□□□□ 0.81
APOBEC3B-202ENST00000335760 ADGRB1O14514 1584 aa20.09■□□□□ 0.81
APOBEC3B-202ENST00000335760 STK26Q9P289 416 aa20.08■□□□□ 0.81
APOBEC3B-202ENST00000335760 NWD1Q149M9 1564 aa20.08■□□□□ 0.81
APOBEC3B-202ENST00000335760 YTHDC2Q9H6S0 1430 aaKnown RBP20.07■□□□□ 0.8
APOBEC3B-202ENST00000335760 ROCK2O75116 1388 aaKnown RBP20.07■□□□□ 0.8
APOBEC3B-202ENST00000335760 LRPPRCP42704 1394 aaKnown RBP20.07■□□□□ 0.8
APOBEC3B-202ENST00000335760 RALGAPBQ86X10 1494 aa20.06■□□□□ 0.8
APOBEC3B-202ENST00000335760 XRN1Q8IZH2 1706 aaKnown RBP20.06■□□□□ 0.8
APOBEC3B-202ENST00000335760 LTBP4Q8N2S1 1624 aa20.04■□□□□ 0.8
APOBEC3B-202ENST00000335760 ABCC11Q96J66 1382 aa20.03■□□□□ 0.8
APOBEC3B-202ENST00000335760 TRAK1Q9UPV9 953 aa20.03■□□□□ 0.8
APOBEC3B-202ENST00000335760 CPS1P31327 1500 aa20.03■□□□□ 0.8
APOBEC3B-202ENST00000335760 NKTRP30414 1462 aaKnown RBP20.02■□□□□ 0.8
APOBEC3B-202ENST00000335760 KNDC1Q76NI1 1749 aa20.02■□□□□ 0.8
APOBEC3B-202ENST00000335760 PROSER2Q86WR7 435 aaPredicted RBP20.02■□□□□ 0.8
APOBEC3B-202ENST00000335760 CARD11Q9BXL7 1154 aa20.01■□□□□ 0.79
APOBEC3B-202ENST00000335760 GPRASP1Q5JY77 1395 aa20.01■□□□□ 0.79
APOBEC3B-202ENST00000335760 ROBO2Q9HCK4 1378 aa20.01■□□□□ 0.79
APOBEC3B-202ENST00000335760 TECPR2O15040 1411 aa20■□□□□ 0.79
APOBEC3B-202ENST00000335760 PTCH1Q13635 1447 aa19.99■□□□□ 0.79
APOBEC3B-202ENST00000335760 RBM33Q96EV2 1170 aaKnown RBP19.99■□□□□ 0.79
APOBEC3B-202ENST00000335760 LRRC7Q96NW7 1537 aa19.99■□□□□ 0.79
APOBEC3B-202ENST00000335760 ZEB1P37275 1124 aaPredicted RBP19.98■□□□□ 0.79
APOBEC3B-202ENST00000335760 DLC1Q96QB1 1528 aa19.98■□□□□ 0.79
APOBEC3B-202ENST00000335760 WAPLQ7Z5K2 1190 aa19.97■□□□□ 0.79
APOBEC3B-202ENST00000335760 SIRT1Q96EB6 747 aa19.97■□□□□ 0.79
APOBEC3B-202ENST00000335760 TMEM94Q12767 1356 aa19.97■□□□□ 0.79
APOBEC3B-202ENST00000335760 ARHGEF28Q8N1W1 1705 aaKnown RBP19.96■□□□□ 0.79
APOBEC3B-202ENST00000335760 PRAM1Q96QH2 718 aa19.95■□□□□ 0.79
APOBEC3B-202ENST00000335760 POGKQ9P215 609 aa19.95■□□□□ 0.79
APOBEC3B-202ENST00000335760 FAM135BQ49AJ0 1406 aa19.95■□□□□ 0.78
APOBEC3B-202ENST00000335760 PLEKHH1Q9ULM0 1364 aa19.95■□□□□ 0.78
APOBEC3B-202ENST00000335760 XIRP1Q702N8 1843 aaKnown RBP19.93■□□□□ 0.78
APOBEC3B-202ENST00000335760 SAFB2Q14151 953 aaKnown RBP eCLIP19.93■□□□□ 0.78
APOBEC3B-202ENST00000335760 C14orf37Q86TY3 774 aa19.93■□□□□ 0.78
APOBEC3B-202ENST00000335760 EIF3AQ14152 1382 aaKnown RBP19.91■□□□□ 0.78
APOBEC3B-202ENST00000335760 NCOA3Q9Y6Q9 1424 aa19.91■□□□□ 0.78
APOBEC3B-202ENST00000335760 CERKQ8TCT0 537 aa19.9■□□□□ 0.78
APOBEC3B-202ENST00000335760 CENPJQ9HC77 1338 aaPredicted RBP19.9■□□□□ 0.78
APOBEC3B-202ENST00000335760 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.89■□□□□ 0.77
APOBEC3B-202ENST00000335760 USP47Q96K76 1375 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms