RNA–Protein interactions for RNA: ENST00000334418.5

CCDC84-201, Transcript of coiled-coil domain containing 84, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC84, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-201ENST00000334418 ZNF326Q5BKZ1 582 aaKnown RBP23.63■■□□□ 1.37
CCDC84-201ENST00000334418 HDGFP51858 240 aaKnown RBP23.61■■□□□ 1.37
CCDC84-201ENST00000334418 ANKLE2Q86XL3 938 aa23.61■■□□□ 1.37
CCDC84-201ENST00000334418 EID1Q9Y6B2 187 aa23.61■■□□□ 1.37
CCDC84-201ENST00000334418 SCAF11Q99590 1463 aaKnown RBP23.61■■□□□ 1.37
CCDC84-201ENST00000334418 SPATA31E1Q6ZUB1 1445 aa23.6■■□□□ 1.37
CCDC84-201ENST00000334418 RIMS2Q9UQ26 1411 aa23.6■■□□□ 1.37
CCDC84-201ENST00000334418 ILDR2Q71H61 639 aa23.6■■□□□ 1.37
CCDC84-201ENST00000334418 ZFYVE9O95405 1425 aa23.59■■□□□ 1.37
CCDC84-201ENST00000334418 ZNF335Q9H4Z2 1342 aaPredicted RBP23.59■■□□□ 1.37
CCDC84-201ENST00000334418 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.58■■□□□ 1.37
CCDC84-201ENST00000334418 SOCS7O14512 581 aa23.57■■□□□ 1.36
CCDC84-201ENST00000334418 PPP1R15AO75807 674 aaPredicted RBP23.57■■□□□ 1.36
CCDC84-201ENST00000334418 NEXMIFQ5QGS0 1516 aa23.57■■□□□ 1.36
CCDC84-201ENST00000334418 RPGRIP1LQ68CZ1 1315 aa23.57■■□□□ 1.36
CCDC84-201ENST00000334418 PPLO60437 1756 aa23.56■■□□□ 1.36
CCDC84-201ENST00000334418 TXNDC2Q86VQ3 553 aa23.56■■□□□ 1.36
CCDC84-201ENST00000334418 CLSPNQ9HAW4 1339 aa23.55■■□□□ 1.36
CCDC84-201ENST00000334418 IQGAP1P46940 1657 aa23.54■■□□□ 1.36
CCDC84-201ENST00000334418 IFT172Q9UG01 1749 aa23.54■■□□□ 1.36
CCDC84-201ENST00000334418 CCER1Q8TC90 406 aaPredicted RBP23.54■■□□□ 1.36
CCDC84-201ENST00000334418 RGL3Q3MIN7 710 aa23.53■■□□□ 1.36
CCDC84-201ENST00000334418 MED14O60244 1454 aa23.53■■□□□ 1.36
CCDC84-201ENST00000334418 LTBP4Q8N2S1 1624 aa23.52■■□□□ 1.36
CCDC84-201ENST00000334418 NPHP4O75161 1426 aaPredicted RBP23.52■■□□□ 1.36
CCDC84-201ENST00000334418 LTKP29376 864 aa23.5■■□□□ 1.35
CCDC84-201ENST00000334418 SIN3AQ96ST3 1273 aa23.49■■□□□ 1.35
CCDC84-201ENST00000334418 PLEKHG1Q9ULL1 1385 aa23.49■■□□□ 1.35
CCDC84-201ENST00000334418 VGFO15240 615 aaPredicted RBP23.48■■□□□ 1.35
CCDC84-201ENST00000334418 NEUROD1Q13562 356 aa23.48■■□□□ 1.35
CCDC84-201ENST00000334418 NUTM2DQ5VT03 806 aaPredicted RBP23.47■■□□□ 1.35
CCDC84-201ENST00000334418 MYOM2P54296 1465 aa23.47■■□□□ 1.35
CCDC84-201ENST00000334418 BCANQ96GW7 911 aa23.46■■□□□ 1.35
CCDC84-201ENST00000334418 DIP2AQ14689 1571 aa23.44■■□□□ 1.34
CCDC84-201ENST00000334418 SETBP1Q9Y6X0 1596 aa23.44■■□□□ 1.34
CCDC84-201ENST00000334418 TONSLQ96HA7 1378 aa23.43■■□□□ 1.34
CCDC84-201ENST00000334418 STAC3Q96MF2 364 aa23.42■■□□□ 1.34
CCDC84-201ENST00000334418 DCAF11Q8TEB1 546 aa23.4■■□□□ 1.34
CCDC84-201ENST00000334418 NRXN3Q9Y4C0 1643 aa23.4■■□□□ 1.34
CCDC84-201ENST00000334418 IQSEC2Q5JU85 1478 aa23.39■■□□□ 1.34
CCDC84-201ENST00000334418 UBAP1LF5GYI3 381 aa23.38■■□□□ 1.33
CCDC84-201ENST00000334418 LAMC1P11047 1609 aa23.37■■□□□ 1.33
CCDC84-201ENST00000334418 NRXN1Q9ULB1 1477 aa23.37■■□□□ 1.33
CCDC84-201ENST00000334418 PIK3C2GO75747 1445 aa23.37■■□□□ 1.33
CCDC84-201ENST00000334418 ADGRF5Q8IZF2 1346 aa23.36■■□□□ 1.33
CCDC84-201ENST00000334418 KDM2AQ9Y2K7 1162 aa23.36■■□□□ 1.33
CCDC84-201ENST00000334418 ADAMTS13Q76LX8 1427 aa23.35■■□□□ 1.33
CCDC84-201ENST00000334418 L3MBTL2Q969R5 705 aa23.35■■□□□ 1.33
CCDC84-201ENST00000334418 SLC26A8Q96RN1 970 aa23.34■■□□□ 1.33
CCDC84-201ENST00000334418 ALKQ9UM73 1620 aa23.33■■□□□ 1.32
CCDC84-201ENST00000334418 TBX22Q9Y458 520 aa23.32■■□□□ 1.32
CCDC84-201ENST00000334418 SETD1AO15047 1707 aaKnown RBP23.32■■□□□ 1.32
CCDC84-201ENST00000334418 PIK3R4Q99570 1358 aa23.3■■□□□ 1.32
CCDC84-201ENST00000334418 CPS1P31327 1500 aa23.3■■□□□ 1.32
CCDC84-201ENST00000334418 TIMELESSQ9UNS1 1208 aa23.3■■□□□ 1.32
CCDC84-201ENST00000334418 PRAG1Q86YV5 1406 aa23.29■■□□□ 1.32
CCDC84-201ENST00000334418 KIAA1210Q9ULL0 1709 aa23.28■■□□□ 1.32
CCDC84-201ENST00000334418 NWD1Q149M9 1564 aa23.27■■□□□ 1.32
CCDC84-201ENST00000334418 CHD2O14647 1828 aaKnown RBP23.26■■□□□ 1.31
CCDC84-201ENST00000334418 SCAF1Q9H7N4 1312 aaKnown RBP23.26■■□□□ 1.31
CCDC84-201ENST00000334418 TOM1O60784 492 aa23.25■■□□□ 1.31
CCDC84-201ENST00000334418 PIP4K2BP78356 416 aa23.25■■□□□ 1.31
CCDC84-201ENST00000334418 C14orf93Q9H972 538 aaKnown RBP23.24■■□□□ 1.31
CCDC84-201ENST00000334418 NKTRP30414 1462 aaKnown RBP23.24■■□□□ 1.31
CCDC84-201ENST00000334418 METP08581 1390 aa23.23■■□□□ 1.31
CCDC84-201ENST00000334418 XRN1Q8IZH2 1706 aaKnown RBP23.22■■□□□ 1.31
CCDC84-201ENST00000334418 KCNA6P17658 529 aa23.21■■□□□ 1.31
CCDC84-201ENST00000334418 CFAP70Q5T0N1 1121 aa23.21■■□□□ 1.31
CCDC84-201ENST00000334418 ASXL1Q8IXJ9 1541 aa23.21■■□□□ 1.31
CCDC84-201ENST00000334418 STRCP1A6NGW2 1772 aa23.21■■□□□ 1.31
CCDC84-201ENST00000334418 TRPM1Q7Z4N2 1603 aa23.2■■□□□ 1.3
CCDC84-201ENST00000334418 KNDC1Q76NI1 1749 aa23.19■■□□□ 1.3
CCDC84-201ENST00000334418 LRRC7Q96NW7 1537 aa23.18■■□□□ 1.3
CCDC84-201ENST00000334418 ADGRB1O14514 1584 aa23.18■■□□□ 1.3
CCDC84-201ENST00000334418 PTPRUQ92729 1446 aa23.17■■□□□ 1.3
CCDC84-201ENST00000334418 AMOTL2Q9Y2J4 779 aa23.16■■□□□ 1.3
CCDC84-201ENST00000334418 YTHDC2Q9H6S0 1430 aaKnown RBP23.16■■□□□ 1.3
CCDC84-201ENST00000334418 LRPPRCP42704 1394 aaKnown RBP23.15■■□□□ 1.3
CCDC84-201ENST00000334418 PTCH1Q13635 1447 aa23.15■■□□□ 1.3
CCDC84-201ENST00000334418 RALGAPBQ86X10 1494 aa23.14■■□□□ 1.29
CCDC84-201ENST00000334418 TMEM132EQ6IEE7 984 aa23.14■■□□□ 1.29
CCDC84-201ENST00000334418 ROCK2O75116 1388 aaKnown RBP23.14■■□□□ 1.29
CCDC84-201ENST00000334418 TECPR2O15040 1411 aa23.13■■□□□ 1.29
CCDC84-201ENST00000334418 NBPF8Q3BBV2 869 aa23.11■■□□□ 1.29
CCDC84-201ENST00000334418 PROSER2Q86WR7 435 aaPredicted RBP23.11■■□□□ 1.29
CCDC84-201ENST00000334418 ABCC11Q96J66 1382 aa23.11■■□□□ 1.29
CCDC84-201ENST00000334418 DLC1Q96QB1 1528 aa23.1■■□□□ 1.29
CCDC84-201ENST00000334418 HSPA1LP34931 641 aa23.1■■□□□ 1.29
CCDC84-201ENST00000334418 RBM33Q96EV2 1170 aaKnown RBP23.1■■□□□ 1.29
CCDC84-201ENST00000334418 STK26Q9P289 416 aa23.1■■□□□ 1.29
CCDC84-201ENST00000334418 TMEM94Q12767 1356 aa23.07■■□□□ 1.28
CCDC84-201ENST00000334418 GPRASP1Q5JY77 1395 aa23.06■■□□□ 1.28
CCDC84-201ENST00000334418 ARHGEF28Q8N1W1 1705 aaKnown RBP23.06■■□□□ 1.28
CCDC84-201ENST00000334418 NBPF1Q3BBV0 1214 aa23.06■■□□□ 1.28
CCDC84-201ENST00000334418 FAM135BQ49AJ0 1406 aa23.06■■□□□ 1.28
CCDC84-201ENST00000334418 NCOA3Q9Y6Q9 1424 aa23.06■■□□□ 1.28
CCDC84-201ENST00000334418 ROBO2Q9HCK4 1378 aa23.05■■□□□ 1.28
CCDC84-201ENST00000334418 XIRP1Q702N8 1843 aaKnown RBP23.05■■□□□ 1.28
CCDC84-201ENST00000334418 EIF3AQ14152 1382 aaKnown RBP23.03■■□□□ 1.28
CCDC84-201ENST00000334418 C14orf37Q86TY3 774 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms