RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 SPHKAPQ2M3C7 1700 aa16.54■□□□□ 0.24
APOBEC3B-201ENST00000333467 TMEM131LA2VDJ0 1609 aa16.52■□□□□ 0.23
APOBEC3B-201ENST00000333467 XIRP1Q702N8 1843 aaKnown RBP16.48■□□□□ 0.23
APOBEC3B-201ENST00000333467 TMEM2Q9UHN6 1383 aa16.48■□□□□ 0.23
APOBEC3B-201ENST00000333467 IDI1Q13907 227 aa16.46■□□□□ 0.23
APOBEC3B-201ENST00000333467 NAIPQ13075 1403 aa16.46■□□□□ 0.23
APOBEC3B-201ENST00000333467 LTKP29376 864 aa16.45■□□□□ 0.22
APOBEC3B-201ENST00000333467 STAG3Q9UJ98 1225 aa16.45■□□□□ 0.22
APOBEC3B-201ENST00000333467 NUP155O75694 1391 aa16.45■□□□□ 0.22
APOBEC3B-201ENST00000333467 TXNDC2Q86VQ3 553 aa16.43■□□□□ 0.22
APOBEC3B-201ENST00000333467 SLC52A1Q9NWF4 448 aa16.43■□□□□ 0.22
APOBEC3B-201ENST00000333467 HFM1A2PYH4 1435 aa16.43■□□□□ 0.22
APOBEC3B-201ENST00000333467 ZFYVE9O95405 1425 aa16.42■□□□□ 0.22
APOBEC3B-201ENST00000333467 LRRC7Q96NW7 1537 aa16.42■□□□□ 0.22
APOBEC3B-201ENST00000333467 ALKQ9UM73 1620 aa16.42■□□□□ 0.22
APOBEC3B-201ENST00000333467 NWD1Q149M9 1564 aa16.41■□□□□ 0.22
APOBEC3B-201ENST00000333467 EID1Q9Y6B2 187 aa16.41■□□□□ 0.22
APOBEC3B-201ENST00000333467 CLTCL1P53675 1640 aa16.41■□□□□ 0.22
APOBEC3B-201ENST00000333467 KIF1BO60333 1816 aa16.4■□□□□ 0.22
APOBEC3B-201ENST00000333467 TRPM2O94759 1503 aa16.39■□□□□ 0.21
APOBEC3B-201ENST00000333467 UBAP1LF5GYI3 381 aa16.39■□□□□ 0.21
APOBEC3B-201ENST00000333467 CHD2O14647 1828 aaKnown RBP16.38■□□□□ 0.21
APOBEC3B-201ENST00000333467 RIMS2Q9UQ26 1411 aa16.38■□□□□ 0.21
APOBEC3B-201ENST00000333467 CCER1Q8TC90 406 aaPredicted RBP16.38■□□□□ 0.21
APOBEC3B-201ENST00000333467 DIP2AQ14689 1571 aa16.36■□□□□ 0.21
APOBEC3B-201ENST00000333467 NRXN3Q9Y4C0 1643 aa16.34■□□□□ 0.21
APOBEC3B-201ENST00000333467 NKTRP30414 1462 aaKnown RBP16.34■□□□□ 0.21
APOBEC3B-201ENST00000333467 PLEKHG1Q9ULL1 1385 aa16.33■□□□□ 0.21
APOBEC3B-201ENST00000333467 CHGAP10645 457 aaKnown RBP16.32■□□□□ 0.2
APOBEC3B-201ENST00000333467 SLC26A8Q96RN1 970 aa16.31■□□□□ 0.2
APOBEC3B-201ENST00000333467 PPP1R15AO75807 674 aaPredicted RBP16.3■□□□□ 0.2
APOBEC3B-201ENST00000333467 NEXMIFQ5QGS0 1516 aa16.3■□□□□ 0.2
APOBEC3B-201ENST00000333467 SETBP1Q9Y6X0 1596 aa16.29■□□□□ 0.2
APOBEC3B-201ENST00000333467 TOM1O60784 492 aa16.29■□□□□ 0.2
APOBEC3B-201ENST00000333467 PPLO60437 1756 aa16.28■□□□□ 0.2
APOBEC3B-201ENST00000333467 PIP4K2BP78356 416 aa16.28■□□□□ 0.2
APOBEC3B-201ENST00000333467 ADAMTS13Q76LX8 1427 aa16.28■□□□□ 0.2
APOBEC3B-201ENST00000333467 XRN1Q8IZH2 1706 aaKnown RBP16.27■□□□□ 0.2
APOBEC3B-201ENST00000333467 BCANQ96GW7 911 aa16.27■□□□□ 0.2
APOBEC3B-201ENST00000333467 TRIM52Q96A61 297 aa16.26■□□□□ 0.19
APOBEC3B-201ENST00000333467 SETD1AO15047 1707 aaKnown RBP16.26■□□□□ 0.19
APOBEC3B-201ENST00000333467 TMEM94Q12767 1356 aa16.26■□□□□ 0.19
APOBEC3B-201ENST00000333467 NUTM2DQ5VT03 806 aaPredicted RBP16.25■□□□□ 0.19
APOBEC3B-201ENST00000333467 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.25■□□□□ 0.19
APOBEC3B-201ENST00000333467 IFT172Q9UG01 1749 aa16.25■□□□□ 0.19
APOBEC3B-201ENST00000333467 KCNA6P17658 529 aa16.24■□□□□ 0.19
APOBEC3B-201ENST00000333467 HDGFP51858 240 aaKnown RBP16.24■□□□□ 0.19
APOBEC3B-201ENST00000333467 ROBO1Q9Y6N7 1651 aa16.24■□□□□ 0.19
APOBEC3B-201ENST00000333467 RNF216Q9NWF9 866 aaPredicted RBP16.23■□□□□ 0.19
APOBEC3B-201ENST00000333467 SLC4A1APQ9BWU0 796 aaKnown RBP16.22■□□□□ 0.19
APOBEC3B-201ENST00000333467 MED1Q15648 1581 aaPredicted RBP16.21■□□□□ 0.19
APOBEC3B-201ENST00000333467 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.21■□□□□ 0.19
APOBEC3B-201ENST00000333467 HSPA1LP34931 641 aa16.2■□□□□ 0.18
APOBEC3B-201ENST00000333467 ZNF326Q5BKZ1 582 aaKnown RBP16.2■□□□□ 0.18
APOBEC3B-201ENST00000333467 PIK3R4Q99570 1358 aa16.2■□□□□ 0.18
APOBEC3B-201ENST00000333467 DISP3Q9P2K9 1392 aa16.2■□□□□ 0.18
APOBEC3B-201ENST00000333467 PPP4R3CPQ6ZMV5 832 aa16.19■□□□□ 0.18
APOBEC3B-201ENST00000333467 RBM33Q96EV2 1170 aaKnown RBP16.19■□□□□ 0.18
APOBEC3B-201ENST00000333467 TBX22Q9Y458 520 aa16.19■□□□□ 0.18
APOBEC3B-201ENST00000333467 PTPRUQ92729 1446 aa16.18■□□□□ 0.18
APOBEC3B-201ENST00000333467 NALCNQ8IZF0 1738 aa16.18■□□□□ 0.18
APOBEC3B-201ENST00000333467 PROSER2Q86WR7 435 aaPredicted RBP16.18■□□□□ 0.18
APOBEC3B-201ENST00000333467 SETD5Q9C0A6 1442 aa16.17■□□□□ 0.18
APOBEC3B-201ENST00000333467 MSH6P52701 1360 aa16.17■□□□□ 0.18
APOBEC3B-201ENST00000333467 PHLPP1O60346 1717 aa16.15■□□□□ 0.18
APOBEC3B-201ENST00000333467 CCDC144AA2RUR9 1427 aa16.15■□□□□ 0.18
APOBEC3B-201ENST00000333467 CLSPNQ9HAW4 1339 aa16.14■□□□□ 0.17
APOBEC3B-201ENST00000333467 CNKSR2Q8WXI2 1034 aa16.14■□□□□ 0.17
APOBEC3B-201ENST00000333467 RAB3GAP2Q9H2M9 1393 aa16.13■□□□□ 0.17
APOBEC3B-201ENST00000333467 NCOA3Q9Y6Q9 1424 aa16.13■□□□□ 0.17
APOBEC3B-201ENST00000333467 FAM135BQ49AJ0 1406 aa16.12■□□□□ 0.17
APOBEC3B-201ENST00000333467 MPHOSPH9Q99550 1183 aa16.12■□□□□ 0.17
APOBEC3B-201ENST00000333467 METP08581 1390 aa16.12■□□□□ 0.17
APOBEC3B-201ENST00000333467 SPATA31E1Q6ZUB1 1445 aa16.11■□□□□ 0.17
APOBEC3B-201ENST00000333467 COL16A1Q07092 1604 aaPredicted RBP16.1■□□□□ 0.17
APOBEC3B-201ENST00000333467 AMOTL2Q9Y2J4 779 aa16.09■□□□□ 0.17
APOBEC3B-201ENST00000333467 KNDC1Q76NI1 1749 aa16.09■□□□□ 0.17
APOBEC3B-201ENST00000333467 C14orf37Q86TY3 774 aa16.08■□□□□ 0.16
APOBEC3B-201ENST00000333467 DCCP43146 1447 aa16.08■□□□□ 0.16
APOBEC3B-201ENST00000333467 PTCH1Q13635 1447 aa16.07■□□□□ 0.16
APOBEC3B-201ENST00000333467 RPGRIP1LQ68CZ1 1315 aa16.07■□□□□ 0.16
APOBEC3B-201ENST00000333467 ACIN1Q9UKV3 1341 aaKnown RBP16.07■□□□□ 0.16
APOBEC3B-201ENST00000333467 LAMC1P11047 1609 aa16.07■□□□□ 0.16
APOBEC3B-201ENST00000333467 ASXL1Q8IXJ9 1541 aa16.06■□□□□ 0.16
APOBEC3B-201ENST00000333467 PRAG1Q86YV5 1406 aa16.06■□□□□ 0.16
APOBEC3B-201ENST00000333467 NHSL1Q5SYE7 1610 aa16.06■□□□□ 0.16
APOBEC3B-201ENST00000333467 AHDC1Q5TGY3 1603 aaPredicted RBP16.06■□□□□ 0.16
APOBEC3B-201ENST00000333467 ADGRL3Q9HAR2 1447 aa16.05■□□□□ 0.16
APOBEC3B-201ENST00000333467 DIEXFQ68CQ4 756 aaKnown RBP16.05■□□□□ 0.16
APOBEC3B-201ENST00000333467 VGFO15240 615 aaPredicted RBP16.04■□□□□ 0.16
APOBEC3B-201ENST00000333467 ILDR2Q71H61 639 aa16.04■□□□□ 0.16
APOBEC3B-201ENST00000333467 SHPRHQ149N8 1683 aa16.03■□□□□ 0.16
APOBEC3B-201ENST00000333467 SLAIN2Q9P270 581 aa16.03■□□□□ 0.16
APOBEC3B-201ENST00000333467 PIK3C2GO75747 1445 aa16.02■□□□□ 0.16
APOBEC3B-201ENST00000333467 MYOM2P54296 1465 aa16.02■□□□□ 0.16
APOBEC3B-201ENST00000333467 ZNF316A6NFI3 1004 aaPredicted RBP16.02■□□□□ 0.15
APOBEC3B-201ENST00000333467 CADPS2Q86UW7 1296 aa16.02■□□□□ 0.15
APOBEC3B-201ENST00000333467 ANKRD30BQ9BXX2 1392 aa16.02■□□□□ 0.15
APOBEC3B-201ENST00000333467 MST1RQ04912 1400 aa16.02■□□□□ 0.15
APOBEC3B-201ENST00000333467 C19orf44Q9H6X5 657 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms