RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 CDC42BPAQ5VT25 1732 aa11.22□□□□□ -0.61
LIMK2-201ENST00000331728 EIF5BO60841 1220 aaKnown RBP11.22□□□□□ -0.61
LIMK2-201ENST00000331728 C8orf34Q49A92 452 aa11.22□□□□□ -0.61
LIMK2-201ENST00000331728 ARHGEF5Q12774 1597 aa11.21□□□□□ -0.61
LIMK2-201ENST00000331728 FRAT2O75474 233 aaPredicted RBP11.21□□□□□ -0.61
LIMK2-201ENST00000331728 CGNL1Q0VF96 1302 aa11.21□□□□□ -0.62
LIMK2-201ENST00000331728 ABCA8O94911 1581 aa11.21□□□□□ -0.62
LIMK2-201ENST00000331728 SLFN5Q08AF3 891 aa11.21□□□□□ -0.62
LIMK2-201ENST00000331728 MORC1Q86VD1 984 aa11.21□□□□□ -0.62
LIMK2-201ENST00000331728 PLEKHH1Q9ULM0 1364 aa11.21□□□□□ -0.62
LIMK2-201ENST00000331728 EIF2AK4Q9P2K8 1649 aaKnown RBP11.2□□□□□ -0.62
LIMK2-201ENST00000331728 CFAP53Q96M91 514 aa11.2□□□□□ -0.62
LIMK2-201ENST00000331728 BCAR3O75815 825 aa11.2□□□□□ -0.62
LIMK2-201ENST00000331728 COG6Q9Y2V7 657 aa11.2□□□□□ -0.62
LIMK2-201ENST00000331728 KIF3BO15066 747 aa11.19□□□□□ -0.62
LIMK2-201ENST00000331728 STAC3Q96MF2 364 aa11.19□□□□□ -0.62
LIMK2-201ENST00000331728 AMER1Q5JTC6 1135 aaPredicted RBP11.19□□□□□ -0.62
LIMK2-201ENST00000331728 SLKQ9H2G2 1235 aaPredicted RBP11.18□□□□□ -0.62
LIMK2-201ENST00000331728 MAPK8IP3Q9UPT6 1336 aa11.18□□□□□ -0.62
LIMK2-201ENST00000331728 ARXQ96QS3 562 aa11.18□□□□□ -0.62
LIMK2-201ENST00000331728 NGEFQ8N5V2 710 aa11.17□□□□□ -0.62
LIMK2-201ENST00000331728 RRP7AQ9Y3A4 280 aaKnown RBP11.17□□□□□ -0.62
LIMK2-201ENST00000331728 PRDM15P57071 1507 aaPredicted RBP11.17□□□□□ -0.62
LIMK2-201ENST00000331728 SAMD9LQ8IVG5 1584 aa11.17□□□□□ -0.62
LIMK2-201ENST00000331728 LAMC1P11047 1609 aa11.17□□□□□ -0.62
LIMK2-201ENST00000331728 FTSJ3Q8IY81 847 aaKnown RBP11.16□□□□□ -0.62
LIMK2-201ENST00000331728 PANK1Q8TE04 598 aa11.16□□□□□ -0.62
LIMK2-201ENST00000331728 PLA2R1Q13018 1463 aa11.16□□□□□ -0.62
LIMK2-201ENST00000331728 CFAP70Q5T0N1 1121 aa11.16□□□□□ -0.62
LIMK2-201ENST00000331728 FAM43AQ8N2R8 423 aa11.16□□□□□ -0.62
LIMK2-201ENST00000331728 AFAP1Q8N556 730 aa11.16□□□□□ -0.62
LIMK2-201ENST00000331728 CLUAP1Q96AJ1 413 aa11.16□□□□□ -0.62
LIMK2-201ENST00000331728 PMFBP1Q8TBY8 1022 aa11.16□□□□□ -0.62
LIMK2-201ENST00000331728 SCAF11Q99590 1463 aaKnown RBP11.16□□□□□ -0.62
LIMK2-201ENST00000331728 DUOX2Q9NRD8 1548 aa11.15□□□□□ -0.62
LIMK2-201ENST00000331728 NKTRP30414 1462 aaKnown RBP11.15□□□□□ -0.62
LIMK2-201ENST00000331728 ASXL1Q8IXJ9 1541 aa11.14□□□□□ -0.63
LIMK2-201ENST00000331728 BCL2L13Q9BXK5 485 aa11.14□□□□□ -0.63
LIMK2-201ENST00000331728 RSPH6AQ9H0K4 717 aa11.14□□□□□ -0.63
LIMK2-201ENST00000331728 PDE3AQ14432 1141 aa11.14□□□□□ -0.63
LIMK2-201ENST00000331728 ZNF521Q96K83 1311 aa11.13□□□□□ -0.63
LIMK2-201ENST00000331728 PIK3C2GO75747 1445 aa11.13□□□□□ -0.63
LIMK2-201ENST00000331728 UBE2Q2Q8WVN8 375 aa11.13□□□□□ -0.63
LIMK2-201ENST00000331728 RWDD1Q9H446 243 aaPredicted RBP11.13□□□□□ -0.63
LIMK2-201ENST00000331728 TRAK1Q9UPV9 953 aa11.13□□□□□ -0.63
LIMK2-201ENST00000331728 MAGI2Q86UL8 1455 aa11.13□□□□□ -0.63
LIMK2-201ENST00000331728 SCAPERQ9BY12 1400 aa11.12□□□□□ -0.63
LIMK2-201ENST00000331728 PREX2Q70Z35 1606 aa11.12□□□□□ -0.63
LIMK2-201ENST00000331728 U2AF1L5P0DN76 240 aaPredicted RBP11.12□□□□□ -0.63
LIMK2-201ENST00000331728 U2AF1Q01081 240 aaKnown RBP eCLIP11.12□□□□□ -0.63
LIMK2-201ENST00000331728 MYH16Q9H6N6 1097 aa11.11□□□□□ -0.63
LIMK2-201ENST00000331728 SPRYD3Q8NCJ5 442 aa11.11□□□□□ -0.63
LIMK2-201ENST00000331728 RUNDC1Q96C34 613 aa11.11□□□□□ -0.63
LIMK2-201ENST00000331728 SPINK5Q9NQ38 1064 aaPredicted RBP11.11□□□□□ -0.63
LIMK2-201ENST00000331728 MAST1Q9Y2H9 1570 aa11.11□□□□□ -0.63
LIMK2-201ENST00000331728 L1TD1Q5T7N2 865 aaKnown RBP11.11□□□□□ -0.63
LIMK2-201ENST00000331728 NINLQ9Y2I6 1382 aa11.11□□□□□ -0.63
LIMK2-201ENST00000331728 CLASP1Q7Z460 1538 aa11.1□□□□□ -0.63
LIMK2-201ENST00000331728 WDR7Q9Y4E6 1490 aa11.1□□□□□ -0.63
LIMK2-201ENST00000331728 U2SURPO15042 1029 aaKnown RBP11.1□□□□□ -0.63
LIMK2-201ENST00000331728 MYO5CQ9NQX4 1742 aa11.1□□□□□ -0.63
LIMK2-201ENST00000331728 WWC1Q8IX03 1113 aa11.1□□□□□ -0.63
LIMK2-201ENST00000331728 SENP3Q9H4L4 574 aaPredicted RBP11.1□□□□□ -0.63
LIMK2-201ENST00000331728 IGHDP01880 384 aa11.1□□□□□ -0.63
LIMK2-201ENST00000331728 TCP11L2Q8N4U5 519 aa11.1□□□□□ -0.63
LIMK2-201ENST00000331728 POGKQ9P215 609 aa11.09□□□□□ -0.63
LIMK2-201ENST00000331728 UNC13BO14795 1591 aa11.09□□□□□ -0.63
LIMK2-201ENST00000331728 TRMT2AQ8IZ69 625 aaKnown RBP11.08□□□□□ -0.64
LIMK2-201ENST00000331728 TTC37Q6PGP7 1564 aa11.08□□□□□ -0.64
LIMK2-201ENST00000331728 VIRMAQ69YN4 1812 aaKnown RBP11.08□□□□□ -0.64
LIMK2-201ENST00000331728 PLCH2O75038 1416 aa11.08□□□□□ -0.64
LIMK2-201ENST00000331728 TRAPPC8Q9Y2L5 1435 aa11.08□□□□□ -0.64
LIMK2-201ENST00000331728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.07□□□□□ -0.64
LIMK2-201ENST00000331728 NPC1L1Q9UHC9 1359 aa11.07□□□□□ -0.64
LIMK2-201ENST00000331728 HSP90AA1P07900 732 aaKnown RBP11.07□□□□□ -0.64
LIMK2-201ENST00000331728 SMC4Q9NTJ3 1288 aa11.07□□□□□ -0.64
LIMK2-201ENST00000331728 IQGAP3Q86VI3 1631 aa11.07□□□□□ -0.64
LIMK2-201ENST00000331728 CDC42BPBQ9Y5S2 1711 aa11.07□□□□□ -0.64
LIMK2-201ENST00000331728 MFAP1P55081 439 aaKnown RBP11.07□□□□□ -0.64
LIMK2-201ENST00000331728 SAFB2Q14151 953 aaKnown RBP eCLIP11.07□□□□□ -0.64
LIMK2-201ENST00000331728 GGT6Q6P531 493 aa11.07□□□□□ -0.64
LIMK2-201ENST00000331728 USP19O94966 1318 aa11.07□□□□□ -0.64
LIMK2-201ENST00000331728 ADGRF5Q8IZF2 1346 aa11.07□□□□□ -0.64
LIMK2-201ENST00000331728 AAMPQ13685 434 aa11.06□□□□□ -0.64
LIMK2-201ENST00000331728 PDZRN3Q9UPQ7 1066 aa11.06□□□□□ -0.64
LIMK2-201ENST00000331728 MTHFSP49914 203 aa11.06□□□□□ -0.64
LIMK2-201ENST00000331728 ZKSCAN2Q63HK3 967 aa11.06□□□□□ -0.64
LIMK2-201ENST00000331728 ITPRIPQ8IWB1 547 aa11.06□□□□□ -0.64
LIMK2-201ENST00000331728 SLC12A5Q9H2X9 1139 aa11.06□□□□□ -0.64
LIMK2-201ENST00000331728 NSD3Q9BZ95 1437 aa11.06□□□□□ -0.64
LIMK2-201ENST00000331728 ABCC2Q92887 1545 aa11.06□□□□□ -0.64
LIMK2-201ENST00000331728 ATP10AO60312 1499 aa11.06□□□□□ -0.64
LIMK2-201ENST00000331728 DMRT2Q9Y5R5 561 aa11.06□□□□□ -0.64
LIMK2-201ENST00000331728 RNF17Q9BXT8 1623 aaKnown RBP11.05□□□□□ -0.64
LIMK2-201ENST00000331728 SYNMO15061 1565 aa11.05□□□□□ -0.64
LIMK2-201ENST00000331728 RARSP54136 660 aaKnown RBP11.05□□□□□ -0.64
LIMK2-201ENST00000331728 HSCBQ8IWL3 235 aa11.05□□□□□ -0.64
LIMK2-201ENST00000331728 SEC24BO95487 1268 aa11.05□□□□□ -0.64
LIMK2-201ENST00000331728 NPM1P06748 294 aaKnown RBP eCLIP11.04□□□□□ -0.64
LIMK2-201ENST00000331728 CARD14Q9BXL6 1004 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms