RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 PREX1Q8TCU6 1659 aa19.78■□□□□ 0.76
CHEK2-201ENST00000328354 RPGRIP1LQ68CZ1 1315 aa19.73■□□□□ 0.75
CHEK2-201ENST00000328354 SCAF11Q99590 1463 aaKnown RBP19.73■□□□□ 0.75
CHEK2-201ENST00000328354 TESK2Q96S53 571 aa19.72■□□□□ 0.75
CHEK2-201ENST00000328354 ADGRF5Q8IZF2 1346 aa19.71■□□□□ 0.75
CHEK2-201ENST00000328354 CLTCQ00610 1675 aaKnown RBP19.71■□□□□ 0.75
CHEK2-201ENST00000328354 SLC52A1Q9NWF4 448 aa19.7■□□□□ 0.74
CHEK2-201ENST00000328354 SETBP1Q9Y6X0 1596 aa19.69■□□□□ 0.74
CHEK2-201ENST00000328354 PRKRIP1Q9H875 184 aaPredicted RBP19.69■□□□□ 0.74
CHEK2-201ENST00000328354 ERVK-7P63135 1459 aa19.69■□□□□ 0.74
CHEK2-201ENST00000328354 PIK3C2GO75747 1445 aa19.68■□□□□ 0.74
CHEK2-201ENST00000328354 NEXMIFQ5QGS0 1516 aa19.68■□□□□ 0.74
CHEK2-201ENST00000328354 TMEM131LA2VDJ0 1609 aa19.67■□□□□ 0.74
CHEK2-201ENST00000328354 CHGAP10645 457 aaKnown RBP19.67■□□□□ 0.74
CHEK2-201ENST00000328354 MYO5BQ9ULV0 1848 aa19.66■□□□□ 0.74
CHEK2-201ENST00000328354 IDI1Q13907 227 aa19.65■□□□□ 0.74
CHEK2-201ENST00000328354 SPATA31D1Q6ZQQ2 1576 aa19.65■□□□□ 0.74
CHEK2-201ENST00000328354 EIF3AQ14152 1382 aaKnown RBP19.65■□□□□ 0.74
CHEK2-201ENST00000328354 DISP3Q9P2K9 1392 aa19.65■□□□□ 0.74
CHEK2-201ENST00000328354 CFAP70Q5T0N1 1121 aa19.64■□□□□ 0.73
CHEK2-201ENST00000328354 POLR3GLQ9BT43 218 aa19.64■□□□□ 0.73
CHEK2-201ENST00000328354 MYO3AQ8NEV4 1616 aa19.63■□□□□ 0.73
CHEK2-201ENST00000328354 ZFYVE9O95405 1425 aa19.63■□□□□ 0.73
CHEK2-201ENST00000328354 KDM4FA0A1W2PPD8 638 aa19.63■□□□□ 0.73
CHEK2-201ENST00000328354 TMF1P82094 1093 aa19.63■□□□□ 0.73
CHEK2-201ENST00000328354 ADGRB1O14514 1584 aa19.61■□□□□ 0.73
CHEK2-201ENST00000328354 C14orf93Q9H972 538 aaKnown RBP19.61■□□□□ 0.73
CHEK2-201ENST00000328354 SCAF1Q9H7N4 1312 aaKnown RBP19.59■□□□□ 0.73
CHEK2-201ENST00000328354 FBXO31Q5XUX0 539 aaPredicted RBP19.59■□□□□ 0.73
CHEK2-201ENST00000328354 VGFO15240 615 aaPredicted RBP19.58■□□□□ 0.73
CHEK2-201ENST00000328354 SLC24A1O60721 1099 aa19.56■□□□□ 0.72
CHEK2-201ENST00000328354 KTN1Q86UP2 1357 aaKnown RBP19.56■□□□□ 0.72
CHEK2-201ENST00000328354 SBNO2Q9Y2G9 1366 aa19.56■□□□□ 0.72
CHEK2-201ENST00000328354 MLECQ14165 292 aa19.55■□□□□ 0.72
CHEK2-201ENST00000328354 CDCA8Q53HL2 280 aa19.54■□□□□ 0.72
CHEK2-201ENST00000328354 KDM5AP29375 1690 aaKnown RBP19.53■□□□□ 0.72
CHEK2-201ENST00000328354 AEBP2Q6ZN18 517 aaPredicted RBP19.53■□□□□ 0.72
CHEK2-201ENST00000328354 ZMYM3Q14202 1370 aa19.53■□□□□ 0.72
CHEK2-201ENST00000328354 MYOM1P52179 1685 aa19.52■□□□□ 0.72
CHEK2-201ENST00000328354 PER1O15534 1290 aaPredicted RBP19.52■□□□□ 0.71
CHEK2-201ENST00000328354 CCDC184Q52MB2 194 aa19.52■□□□□ 0.71
CHEK2-201ENST00000328354 A2ML1A8K2U0 1454 aa19.5■□□□□ 0.71
CHEK2-201ENST00000328354 ESF1Q9H501 851 aaKnown RBP19.5■□□□□ 0.71
CHEK2-201ENST00000328354 QRICH2Q9H0J4 1663 aa19.49■□□□□ 0.71
CHEK2-201ENST00000328354 ARHGEF28Q8N1W1 1705 aaKnown RBP19.49■□□□□ 0.71
CHEK2-201ENST00000328354 RALBP1Q15311 655 aa19.48■□□□□ 0.71
CHEK2-201ENST00000328354 MRS2Q9HD23 443 aa19.48■□□□□ 0.71
CHEK2-201ENST00000328354 GTF3C3Q9Y5Q9 886 aa19.48■□□□□ 0.71
CHEK2-201ENST00000328354 CENPJQ9HC77 1338 aaPredicted RBP19.47■□□□□ 0.71
CHEK2-201ENST00000328354 ASXL1Q8IXJ9 1541 aa19.47■□□□□ 0.71
CHEK2-201ENST00000328354 PARD3Q8TEW0 1356 aa19.46■□□□□ 0.71
CHEK2-201ENST00000328354 NUTM2DQ5VT03 806 aaPredicted RBP19.46■□□□□ 0.71
CHEK2-201ENST00000328354 PANK3Q9H999 370 aa19.46■□□□□ 0.71
CHEK2-201ENST00000328354 ADAMTSL3P82987 1691 aa19.46■□□□□ 0.71
CHEK2-201ENST00000328354 TMEM132EQ6IEE7 984 aa19.44■□□□□ 0.7
CHEK2-201ENST00000328354 STAG3Q9UJ98 1225 aa19.43■□□□□ 0.7
CHEK2-201ENST00000328354 TRAK1Q9UPV9 953 aa19.43■□□□□ 0.7
CHEK2-201ENST00000328354 ALKQ9UM73 1620 aa19.43■□□□□ 0.7
CHEK2-201ENST00000328354 MYBBP1AQ9BQG0 1328 aaKnown RBP19.43■□□□□ 0.7
CHEK2-201ENST00000328354 TNRQ92752 1358 aa19.42■□□□□ 0.7
CHEK2-201ENST00000328354 RIMS2Q9UQ26 1411 aa19.42■□□□□ 0.7
CHEK2-201ENST00000328354 BRD4O60885 1362 aaPredicted RBP19.41■□□□□ 0.7
CHEK2-201ENST00000328354 SETD1AO15047 1707 aaKnown RBP19.41■□□□□ 0.7
CHEK2-201ENST00000328354 FER1L4A9Z1Z3 1794 aa19.4■□□□□ 0.7
CHEK2-201ENST00000328354 UBR1Q8IWV7 1749 aa19.4■□□□□ 0.7
CHEK2-201ENST00000328354 C3P01024 1663 aa19.38■□□□□ 0.69
CHEK2-201ENST00000328354 RIMS1Q86UR5 1692 aaKnown RBP19.37■□□□□ 0.69
CHEK2-201ENST00000328354 PUS7Q96PZ0 661 aaKnown RBP19.37■□□□□ 0.69
CHEK2-201ENST00000328354 NPC1L1Q9UHC9 1359 aa19.37■□□□□ 0.69
CHEK2-201ENST00000328354 HNRNPUQ00839 825 aaKnown RBP eCLIP19.37■□□□□ 0.69
CHEK2-201ENST00000328354 YTHDC2Q9H6S0 1430 aaKnown RBP19.37■□□□□ 0.69
CHEK2-201ENST00000328354 NRXN3Q9Y4C0 1643 aa19.36■□□□□ 0.69
CHEK2-201ENST00000328354 PTPRMP28827 1452 aa19.36■□□□□ 0.69
CHEK2-201ENST00000328354 NLRP1Q9C000 1473 aa19.36■□□□□ 0.69
CHEK2-201ENST00000328354 CNGB1Q14028 1251 aaPredicted RBP19.36■□□□□ 0.69
CHEK2-201ENST00000328354 FAM9BQ8IZU0 186 aa19.36■□□□□ 0.69
CHEK2-201ENST00000328354 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.35■□□□□ 0.69
CHEK2-201ENST00000328354 TULP4Q9NRJ4 1543 aa19.35■□□□□ 0.69
CHEK2-201ENST00000328354 NLRP13Q86W25 1043 aa19.35■□□□□ 0.69
CHEK2-201ENST00000328354 AMER1Q5JTC6 1135 aaPredicted RBP19.34■□□□□ 0.69
CHEK2-201ENST00000328354 PNISRQ8TF01 805 aaKnown RBP19.34■□□□□ 0.69
CHEK2-201ENST00000328354 KNSTRNQ9Y448 316 aa19.34■□□□□ 0.69
CHEK2-201ENST00000328354 TMC1Q8TDI8 760 aa19.33■□□□□ 0.69
CHEK2-201ENST00000328354 DLC1Q96QB1 1528 aa19.33■□□□□ 0.68
CHEK2-201ENST00000328354 PLPPR3Q6T4P5 718 aa19.33■□□□□ 0.68
CHEK2-201ENST00000328354 LRPPRCP42704 1394 aaKnown RBP19.32■□□□□ 0.68
CHEK2-201ENST00000328354 CC2D1BQ5T0F9 858 aaKnown RBP19.31■□□□□ 0.68
CHEK2-201ENST00000328354 TMEM2Q9UHN6 1383 aa19.31■□□□□ 0.68
CHEK2-201ENST00000328354 HDGFP51858 240 aaKnown RBP19.31■□□□□ 0.68
CHEK2-201ENST00000328354 EVC2Q86UK5 1308 aa19.3■□□□□ 0.68
CHEK2-201ENST00000328354 ZBED9Q6R2W3 1325 aa19.29■□□□□ 0.68
CHEK2-201ENST00000328354 KNDC1Q76NI1 1749 aa19.28■□□□□ 0.68
CHEK2-201ENST00000328354 USP32Q8NFA0 1604 aa19.27■□□□□ 0.68
CHEK2-201ENST00000328354 STK26Q9P289 416 aa19.27■□□□□ 0.68
CHEK2-201ENST00000328354 ABCC11Q96J66 1382 aa19.26■□□□□ 0.67
CHEK2-201ENST00000328354 CEBPAP49715 358 aaPredicted RBP19.26■□□□□ 0.67
CHEK2-201ENST00000328354 CARD14Q9BXL6 1004 aa19.26■□□□□ 0.67
CHEK2-201ENST00000328354 INSRP06213 1382 aa19.25■□□□□ 0.67
CHEK2-201ENST00000328354 PRAM1Q96QH2 718 aa19.24■□□□□ 0.67
CHEK2-201ENST00000328354 SLIT1O75093 1534 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms