RNA–Protein interactions for RNA: ENST00000327443.8

SP1-201, Transcript of Sp1 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP1, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-201ENST00000327443 TRPM2O94759 1503 aa13.04□□□□□ -0.32
SP1-201ENST00000327443 NUP155O75694 1391 aa13.04□□□□□ -0.32
SP1-201ENST00000327443 PTPRTO14522 1441 aa13.03□□□□□ -0.32
SP1-201ENST00000327443 SPHKAPQ2M3C7 1700 aa13.03□□□□□ -0.32
SP1-201ENST00000327443 EFCAB6Q5THR3 1501 aa13.03□□□□□ -0.32
SP1-201ENST00000327443 PPM1GO15355 546 aaPredicted RBP13.03□□□□□ -0.32
SP1-201ENST00000327443 E9PCH4 1651 aa13.02□□□□□ -0.32
SP1-201ENST00000327443 STAC3Q96MF2 364 aa13.02□□□□□ -0.33
SP1-201ENST00000327443 TONSLQ96HA7 1378 aa13.02□□□□□ -0.33
SP1-201ENST00000327443 UHRF1BP1Q6BDS2 1440 aa13.02□□□□□ -0.33
SP1-201ENST00000327443 CANXP27824 592 aaKnown RBP13.01□□□□□ -0.33
SP1-201ENST00000327443 SLC4A1APQ9BWU0 796 aaKnown RBP13.01□□□□□ -0.33
SP1-201ENST00000327443 CEP152O94986 1710 aa13.01□□□□□ -0.33
SP1-201ENST00000327443 NPM2Q86SE8 214 aaKnown RBP13.01□□□□□ -0.33
SP1-201ENST00000327443 IPO4Q8TEX9 1081 aaKnown RBP13.01□□□□□ -0.33
SP1-201ENST00000327443 ARID4BQ4LE39 1312 aaPredicted RBP13.01□□□□□ -0.33
SP1-201ENST00000327443 KANK1Q14678 1352 aa13.01□□□□□ -0.33
SP1-201ENST00000327443 ARHGEF40Q8TER5 1519 aa13.01□□□□□ -0.33
SP1-201ENST00000327443 FOXD1Q16676 465 aa13□□□□□ -0.33
SP1-201ENST00000327443 PPP1R15AO75807 674 aaPredicted RBP13□□□□□ -0.33
SP1-201ENST00000327443 BRD2P25440 801 aaKnown RBP13□□□□□ -0.33
SP1-201ENST00000327443 ZNF326Q5BKZ1 582 aaKnown RBP13□□□□□ -0.33
SP1-201ENST00000327443 HIRIP3Q9BW71 556 aaPredicted RBP13□□□□□ -0.33
SP1-201ENST00000327443 LAMC1P11047 1609 aa13□□□□□ -0.33
SP1-201ENST00000327443 ARHGAP31Q2M1Z3 1444 aa12.98□□□□□ -0.33
SP1-201ENST00000327443 AFAP1Q8N556 730 aa12.98□□□□□ -0.33
SP1-201ENST00000327443 PNNQ9H307 717 aaKnown RBP12.98□□□□□ -0.33
SP1-201ENST00000327443 PPP6R1Q9UPN7 881 aa12.97□□□□□ -0.33
SP1-201ENST00000327443 PLA2R1Q13018 1463 aa12.96□□□□□ -0.33
SP1-201ENST00000327443 CAMSAP1Q5T5Y3 1602 aa12.96□□□□□ -0.33
SP1-201ENST00000327443 ABCC3O15438 1527 aa12.95□□□□□ -0.34
SP1-201ENST00000327443 PKD2Q13563 968 aa12.95□□□□□ -0.34
SP1-201ENST00000327443 PLCD3Q8N3E9 789 aa12.95□□□□□ -0.34
SP1-201ENST00000327443 FAM69CQ0P6D2 419 aa12.94□□□□□ -0.34
SP1-201ENST00000327443 ZFP91Q96JP5 570 aaPredicted RBP12.94□□□□□ -0.34
SP1-201ENST00000327443 POLR1AO95602 1720 aaPredicted RBP12.94□□□□□ -0.34
SP1-201ENST00000327443 DDX10Q13206 875 aaKnown RBP12.94□□□□□ -0.34
SP1-201ENST00000327443 SIN3AQ96ST3 1273 aa12.94□□□□□ -0.34
SP1-201ENST00000327443 NFKBIBQ15653 356 aa12.93□□□□□ -0.34
SP1-201ENST00000327443 KIAA1210Q9ULL0 1709 aa12.93□□□□□ -0.34
SP1-201ENST00000327443 CNGB1Q14028 1251 aaPredicted RBP12.93□□□□□ -0.34
SP1-201ENST00000327443 PIK3C2BO00750 1634 aa12.93□□□□□ -0.34
SP1-201ENST00000327443 TSPOAP1O95153 1857 aa12.92□□□□□ -0.34
SP1-201ENST00000327443 CCDC144AA2RUR9 1427 aa12.92□□□□□ -0.34
SP1-201ENST00000327443 RALGAPBQ86X10 1494 aa12.92□□□□□ -0.34
SP1-201ENST00000327443 HAP1P54257 671 aaPredicted RBP12.92□□□□□ -0.34
SP1-201ENST00000327443 PDCL3Q9H2J4 239 aa12.92□□□□□ -0.34
SP1-201ENST00000327443 CNTLNQ9NXG0 1405 aa12.91□□□□□ -0.34
SP1-201ENST00000327443 IFT172Q9UG01 1749 aa12.91□□□□□ -0.34
SP1-201ENST00000327443 SPATA31E1Q6ZUB1 1445 aa12.91□□□□□ -0.34
SP1-201ENST00000327443 CLTCL1P53675 1640 aa12.9□□□□□ -0.34
SP1-201ENST00000327443 CENPJQ9HC77 1338 aaPredicted RBP12.89□□□□□ -0.35
SP1-201ENST00000327443 KIF1BO60333 1816 aa12.89□□□□□ -0.35
SP1-201ENST00000327443 MROH2AA6NES4 1674 aa12.89□□□□□ -0.35
SP1-201ENST00000327443 SAMD1Q6SPF0 538 aaPredicted RBP12.89□□□□□ -0.35
SP1-201ENST00000327443 ZHX1Q9UKY1 873 aaPredicted RBP12.89□□□□□ -0.35
SP1-201ENST00000327443 TRPM1Q7Z4N2 1603 aa12.88□□□□□ -0.35
SP1-201ENST00000327443 MYOM2P54296 1465 aa12.88□□□□□ -0.35
SP1-201ENST00000327443 NOS1P29475 1434 aa12.88□□□□□ -0.35
SP1-201ENST00000327443 ADGRB3O60242 1522 aa12.87□□□□□ -0.35
SP1-201ENST00000327443 HNRNPUQ00839 825 aaKnown RBP eCLIP12.87□□□□□ -0.35
SP1-201ENST00000327443 PLPPR3Q6T4P5 718 aa12.87□□□□□ -0.35
SP1-201ENST00000327443 KDM5AP29375 1690 aaKnown RBP12.87□□□□□ -0.35
SP1-201ENST00000327443 YEATS2Q9ULM3 1422 aa12.87□□□□□ -0.35
SP1-201ENST00000327443 ZNF830Q96NB3 372 aaPredicted RBP12.85□□□□□ -0.35
SP1-201ENST00000327443 VGLL3A8MV65 326 aa12.85□□□□□ -0.35
SP1-201ENST00000327443 L3MBTL2Q969R5 705 aa12.85□□□□□ -0.35
SP1-201ENST00000327443 GPRASP1Q5JY77 1395 aa12.85□□□□□ -0.35
SP1-201ENST00000327443 FTSJ3Q8IY81 847 aaKnown RBP12.84□□□□□ -0.35
SP1-201ENST00000327443 SECISBP2LQ93073 1101 aaKnown RBP12.84□□□□□ -0.35
SP1-201ENST00000327443 MADDQ8WXG6 1647 aa12.84□□□□□ -0.35
SP1-201ENST00000327443 NRXN1Q9ULB1 1477 aa12.84□□□□□ -0.35
SP1-201ENST00000327443 PREX1Q8TCU6 1659 aa12.84□□□□□ -0.35
SP1-201ENST00000327443 CCER2I3L3R5 266 aa12.84□□□□□ -0.35
SP1-201ENST00000327443 KIF3BO15066 747 aa12.84□□□□□ -0.35
SP1-201ENST00000327443 PRAG1Q86YV5 1406 aa12.83□□□□□ -0.36
SP1-201ENST00000327443 CLCN1P35523 988 aa12.83□□□□□ -0.36
SP1-201ENST00000327443 DNAJC5Q9H3Z4 198 aa12.83□□□□□ -0.36
SP1-201ENST00000327443 NPATQ14207 1427 aa12.83□□□□□ -0.36
SP1-201ENST00000327443 COL17A1Q9UMD9 1497 aaPredicted RBP12.82□□□□□ -0.36
SP1-201ENST00000327443 SIGLEC1Q9BZZ2 1709 aa12.82□□□□□ -0.36
SP1-201ENST00000327443 TULP1O00294 542 aaPredicted RBP12.82□□□□□ -0.36
SP1-201ENST00000327443 SPATA31D1Q6ZQQ2 1576 aa12.82□□□□□ -0.36
SP1-201ENST00000327443 SYNMO15061 1565 aa12.81□□□□□ -0.36
SP1-201ENST00000327443 DDRGK1Q96HY6 314 aa12.81□□□□□ -0.36
SP1-201ENST00000327443 RAPGEF3O95398 923 aa12.81□□□□□ -0.36
SP1-201ENST00000327443 PPLO60437 1756 aa12.81□□□□□ -0.36
SP1-201ENST00000327443 ANP32CO43423 234 aa12.8□□□□□ -0.36
SP1-201ENST00000327443 SETBP1Q9Y6X0 1596 aa12.79□□□□□ -0.36
SP1-201ENST00000327443 TMEM51Q9NW97 253 aa12.79□□□□□ -0.36
SP1-201ENST00000327443 ZFYVE9O95405 1425 aa12.79□□□□□ -0.36
SP1-201ENST00000327443 RPGRIP1LQ68CZ1 1315 aa12.79□□□□□ -0.36
SP1-201ENST00000327443 IQGAP1P46940 1657 aa12.78□□□□□ -0.36
SP1-201ENST00000327443 TEX2Q8IWB9 1127 aa12.77□□□□□ -0.36
SP1-201ENST00000327443 CLTCQ00610 1675 aaKnown RBP12.77□□□□□ -0.37
SP1-201ENST00000327443 ERVK-7P63135 1459 aa12.76□□□□□ -0.37
SP1-201ENST00000327443 FRAT2O75474 233 aaPredicted RBP12.76□□□□□ -0.37
SP1-201ENST00000327443 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.37
SP1-201ENST00000327443 UGGT1Q9NYU2 1555 aa12.75□□□□□ -0.37
SP1-201ENST00000327443 TMEM131LA2VDJ0 1609 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms