RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 IGHDP01880 384 aa23.06■■□□□ 1.28
PRKCB-202ENST00000321728 SLKQ9H2G2 1235 aaPredicted RBP23.06■■□□□ 1.28
PRKCB-202ENST00000321728 BECN1Q14457 450 aa23.05■■□□□ 1.28
PRKCB-202ENST00000321728 SYCP2Q9BX26 1530 aa23.05■■□□□ 1.28
PRKCB-202ENST00000321728 CCDC141Q6ZP82 1450 aa23.05■■□□□ 1.28
PRKCB-202ENST00000321728 USP19O94966 1318 aa23.05■■□□□ 1.28
PRKCB-202ENST00000321728 SPINK5Q9NQ38 1064 aaPredicted RBP23.05■■□□□ 1.28
PRKCB-202ENST00000321728 AMER1Q5JTC6 1135 aaPredicted RBP23.04■■□□□ 1.28
PRKCB-202ENST00000321728 ARHGEF5Q12774 1597 aa23.03■■□□□ 1.28
PRKCB-202ENST00000321728 APAF1O14727 1248 aa23.03■■□□□ 1.28
PRKCB-202ENST00000321728 SEC24BO95487 1268 aa23.03■■□□□ 1.28
PRKCB-202ENST00000321728 EIF2AK4Q9P2K8 1649 aaKnown RBP23.03■■□□□ 1.28
PRKCB-202ENST00000321728 NKTRP30414 1462 aaKnown RBP23.02■■□□□ 1.28
PRKCB-202ENST00000321728 WDR7Q9Y4E6 1490 aa23.02■■□□□ 1.28
PRKCB-202ENST00000321728 TRMT2AQ8IZ69 625 aaKnown RBP23.02■■□□□ 1.28
PRKCB-202ENST00000321728 CDC42BPBQ9Y5S2 1711 aa23.02■■□□□ 1.28
PRKCB-202ENST00000321728 MYO5CQ9NQX4 1742 aa23.01■■□□□ 1.27
PRKCB-202ENST00000321728 CANXP27824 592 aaKnown RBP23■■□□□ 1.27
PRKCB-202ENST00000321728 ARHGAP5Q13017 1502 aa23■■□□□ 1.27
PRKCB-202ENST00000321728 MAPK8IP3Q9UPT6 1336 aa22.98■■□□□ 1.27
PRKCB-202ENST00000321728 CLASP1Q7Z460 1538 aa22.98■■□□□ 1.27
PRKCB-202ENST00000321728 E9PSI1 815 aa22.97■■□□□ 1.27
PRKCB-202ENST00000321728 CGNL1Q0VF96 1302 aa22.97■■□□□ 1.27
PRKCB-202ENST00000321728 VIRMAQ69YN4 1812 aaKnown RBP22.96■■□□□ 1.27
PRKCB-202ENST00000321728 L1TD1Q5T7N2 865 aaKnown RBP22.96■■□□□ 1.27
PRKCB-202ENST00000321728 RSPH4AQ5TD94 716 aa22.96■■□□□ 1.27
PRKCB-202ENST00000321728 CLUAP1Q96AJ1 413 aa22.96■■□□□ 1.27
PRKCB-202ENST00000321728 COG6Q9Y2V7 657 aa22.95■■□□□ 1.27
PRKCB-202ENST00000321728 TTC37Q6PGP7 1564 aa22.95■■□□□ 1.26
PRKCB-202ENST00000321728 CDCA8Q53HL2 280 aa22.95■■□□□ 1.26
PRKCB-202ENST00000321728 ARXQ96QS3 562 aa22.95■■□□□ 1.26
PRKCB-202ENST00000321728 PANK1Q8TE04 598 aa22.95■■□□□ 1.26
PRKCB-202ENST00000321728 PIK3C2GO75747 1445 aa22.94■■□□□ 1.26
PRKCB-202ENST00000321728 PDE3AQ14432 1141 aa22.93■■□□□ 1.26
PRKCB-202ENST00000321728 ASXL1Q8IXJ9 1541 aa22.93■■□□□ 1.26
PRKCB-202ENST00000321728 UPF2Q9HAU5 1272 aaKnown RBP22.93■■□□□ 1.26
PRKCB-202ENST00000321728 RRAGDQ9NQL2 400 aaPredicted RBP22.93■■□□□ 1.26
PRKCB-202ENST00000321728 DMRT2Q9Y5R5 561 aa22.93■■□□□ 1.26
PRKCB-202ENST00000321728 CENPJQ9HC77 1338 aaPredicted RBP22.92■■□□□ 1.26
PRKCB-202ENST00000321728 PREX2Q70Z35 1606 aa22.92■■□□□ 1.26
PRKCB-202ENST00000321728 UNC13BO14795 1591 aa22.91■■□□□ 1.26
PRKCB-202ENST00000321728 ANTXR1Q9H6X2 564 aa22.89■■□□□ 1.25
PRKCB-202ENST00000321728 RNF17Q9BXT8 1623 aaKnown RBP22.88■■□□□ 1.25
PRKCB-202ENST00000321728 ABCC2Q92887 1545 aa22.87■■□□□ 1.25
PRKCB-202ENST00000321728 SYNMO15061 1565 aa22.87■■□□□ 1.25
PRKCB-202ENST00000321728 NLRP1Q9C000 1473 aa22.86■■□□□ 1.25
PRKCB-202ENST00000321728 IQGAP3Q86VI3 1631 aa22.85■■□□□ 1.25
PRKCB-202ENST00000321728 SPRYD3Q8NCJ5 442 aa22.85■■□□□ 1.25
PRKCB-202ENST00000321728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.85■■□□□ 1.257e-7■□□□□ 9.5
PRKCB-202ENST00000321728 TBC1D2Q9BYX2 928 aa22.85■■□□□ 1.25
PRKCB-202ENST00000321728 NINLQ9Y2I6 1382 aa22.85■■□□□ 1.25
PRKCB-202ENST00000321728 TBC1D32Q96NH3 1257 aa22.84■■□□□ 1.25
PRKCB-202ENST00000321728 PMFBP1Q8TBY8 1022 aa22.83■■□□□ 1.25
PRKCB-202ENST00000321728 GOLGA6L3A6NEY3 463 aa22.83■■□□□ 1.24
PRKCB-202ENST00000321728 NPC1L1Q9UHC9 1359 aa22.82■■□□□ 1.24
PRKCB-202ENST00000321728 ERCC6L2Q5T890 1561 aa22.82■■□□□ 1.24
PRKCB-202ENST00000321728 GZF1Q9H116 711 aaPredicted RBP22.82■■□□□ 1.24
PRKCB-202ENST00000321728 ATP10AO60312 1499 aa22.82■■□□□ 1.24
PRKCB-202ENST00000321728 WWC1Q8IX03 1113 aa22.81■■□□□ 1.24
PRKCB-202ENST00000321728 XRCC6P12956 609 aaKnown RBP eCLIP22.81■■□□□ 1.241e-7■■■■□ 19.5
PRKCB-202ENST00000321728 NEUROD2Q15784 382 aa22.81■■□□□ 1.24
PRKCB-202ENST00000321728 NGEFQ8N5V2 710 aa22.81■■□□□ 1.24
PRKCB-202ENST00000321728 SCAF11Q99590 1463 aaKnown RBP22.8■■□□□ 1.24
PRKCB-202ENST00000321728 IQGAP1P46940 1657 aa22.8■■□□□ 1.24
PRKCB-202ENST00000321728 AFAP1Q8N556 730 aa22.8■■□□□ 1.24
PRKCB-202ENST00000321728 PCDHB15Q9Y5E8 787 aa22.79■■□□□ 1.24
PRKCB-202ENST00000321728 PDZRN3Q9UPQ7 1066 aa22.79■■□□□ 1.24
PRKCB-202ENST00000321728 MADDQ8WXG6 1647 aa22.78■■□□□ 1.24
PRKCB-202ENST00000321728 MCM4P33991 863 aa22.76■■□□□ 1.23
PRKCB-202ENST00000321728 NAP1L5Q96NT1 182 aaPredicted RBP22.76■■□□□ 1.23
PRKCB-202ENST00000321728 MAST1Q9Y2H9 1570 aa22.76■■□□□ 1.23
PRKCB-202ENST00000321728 TRAPPC8Q9Y2L5 1435 aa22.75■■□□□ 1.23
PRKCB-202ENST00000321728 RARSP54136 660 aaKnown RBP22.75■■□□□ 1.23
PRKCB-202ENST00000321728 BCL2L13Q9BXK5 485 aa22.75■■□□□ 1.23
PRKCB-202ENST00000321728 PANK2Q9BZ23 570 aa22.75■■□□□ 1.23
PRKCB-202ENST00000321728 TNNQ9UQP3 1299 aa22.75■■□□□ 1.23
PRKCB-202ENST00000321728 RRP7AQ9Y3A4 280 aaKnown RBP22.75■■□□□ 1.23
PRKCB-202ENST00000321728 MYOM1P52179 1685 aa22.75■■□□□ 1.23
PRKCB-202ENST00000321728 RLBP1P12271 317 aa22.75■■□□□ 1.23
PRKCB-202ENST00000321728 PNNQ9H307 717 aaKnown RBP22.75■■□□□ 1.23
PRKCB-202ENST00000321728 TNNT2P45379 298 aaPredicted RBP22.74■■□□□ 1.23
PRKCB-202ENST00000321728 PLXNC1O60486 1568 aa22.73■■□□□ 1.23
PRKCB-202ENST00000321728 RWDD1Q9H446 243 aaPredicted RBP22.73■■□□□ 1.23
PRKCB-202ENST00000321728 FSD2A1L4K1 749 aa22.73■■□□□ 1.23
PRKCB-202ENST00000321728 DUOX2Q9NRD8 1548 aa22.72■■□□□ 1.23
PRKCB-202ENST00000321728 AAMPQ13685 434 aa22.72■■□□□ 1.23
PRKCB-202ENST00000321728 CARD14Q9BXL6 1004 aa22.71■■□□□ 1.23
PRKCB-202ENST00000321728 CHD1O14646 1710 aa22.7■■□□□ 1.22
PRKCB-202ENST00000321728 KDM5AP29375 1690 aaKnown RBP22.7■■□□□ 1.22
PRKCB-202ENST00000321728 TRAK2O60296 914 aa22.7■■□□□ 1.22
PRKCB-202ENST00000321728 SENP3Q9H4L4 574 aaPredicted RBP22.7■■□□□ 1.22
PRKCB-202ENST00000321728 SCAPERQ9BY12 1400 aa22.7■■□□□ 1.22
PRKCB-202ENST00000321728 CFAP70Q5T0N1 1121 aa22.69■■□□□ 1.22
PRKCB-202ENST00000321728 CHMP5Q9NZZ3 219 aa22.69■■□□□ 1.22
PRKCB-202ENST00000321728 ZMYM3Q14202 1370 aa22.69■■□□□ 1.22
PRKCB-202ENST00000321728 EFCAB2Q5VUJ9 269 aa22.68■■□□□ 1.22
PRKCB-202ENST00000321728 SPAG9O60271 1321 aaKnown RBP22.68■■□□□ 1.22
PRKCB-202ENST00000321728 CLCN1P35523 988 aa22.68■■□□□ 1.22
PRKCB-202ENST00000321728 MFAP1P55081 439 aaKnown RBP22.68■■□□□ 1.22
PRKCB-202ENST00000321728 C22orf23Q9BZE7 217 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms