RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 RSPH6AQ9H0K4 717 aa18.14■□□□□ 0.5
PABPC1-201ENST00000318607 PPRC1Q5VV67 1664 aaKnown RBP18.14■□□□□ 0.49
PABPC1-201ENST00000318607 NCLP19338 710 aaKnown RBP18.14■□□□□ 0.49
PABPC1-201ENST00000318607 KDM2BQ8NHM5 1336 aa18.13■□□□□ 0.49
PABPC1-201ENST00000318607 FTSJ3Q8IY81 847 aaKnown RBP18.13■□□□□ 0.49
PABPC1-201ENST00000318607 PZPP20742 1482 aa18.13■□□□□ 0.49
PABPC1-201ENST00000318607 CCDC144AA2RUR9 1427 aa18.12■□□□□ 0.49
PABPC1-201ENST00000318607 PREX2Q70Z35 1606 aa18.12■□□□□ 0.49
PABPC1-201ENST00000318607 ABCC2Q92887 1545 aa18.11■□□□□ 0.49
PABPC1-201ENST00000318607 ZCCHC11Q5TAX3 1644 aaKnown RBP18.11■□□□□ 0.49
PABPC1-201ENST00000318607 SLFN5Q08AF3 891 aa18.11■□□□□ 0.49
PABPC1-201ENST00000318607 FAM43AQ8N2R8 423 aa18.11■□□□□ 0.49
PABPC1-201ENST00000318607 PDZRN3Q9UPQ7 1066 aa18.11■□□□□ 0.49
PABPC1-201ENST00000318607 TBC1D2Q9BYX2 928 aa18.1■□□□□ 0.49
PABPC1-201ENST00000318607 TCOF1Q13428 1488 aaKnown RBP18.1■□□□□ 0.49
PABPC1-201ENST00000318607 TRIM44Q96DX7 344 aaPredicted RBP18.1■□□□□ 0.49
PABPC1-201ENST00000318607 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
PABPC1-201ENST00000318607 TESK2Q96S53 571 aa18.09■□□□□ 0.49
PABPC1-201ENST00000318607 XRCC6P12956 609 aaKnown RBP eCLIP18.09■□□□□ 0.49
PABPC1-201ENST00000318607 CDC42BPAQ5VT25 1732 aa18.09■□□□□ 0.49
PABPC1-201ENST00000318607 PCDHB15Q9Y5E8 787 aa18.08■□□□□ 0.49
PABPC1-201ENST00000318607 RLBP1P12271 317 aa18.08■□□□□ 0.49
PABPC1-201ENST00000318607 PLB1Q6P1J6 1458 aa18.08■□□□□ 0.48
PABPC1-201ENST00000318607 CFAP74Q9C0B2 1584 aa18.08■□□□□ 0.48
PABPC1-201ENST00000318607 HSP90AA2PQ14568 343 aaPredicted RBP18.07■□□□□ 0.48
PABPC1-201ENST00000318607 PARD3Q8TEW0 1356 aa18.07■□□□□ 0.48
PABPC1-201ENST00000318607 ITPRIPQ8IWB1 547 aa18.07■□□□□ 0.48
PABPC1-201ENST00000318607 TSR2Q969E8 191 aaKnown RBP18.07■□□□□ 0.48
PABPC1-201ENST00000318607 GCC2Q8IWJ2 1684 aa18.06■□□□□ 0.48
PABPC1-201ENST00000318607 REREQ9P2R6 1566 aa18.06■□□□□ 0.48
PABPC1-201ENST00000318607 ADGBQ8N7X0 1667 aa18.06■□□□□ 0.48
PABPC1-201ENST00000318607 ROCK1Q13464 1354 aa18.06■□□□□ 0.48
PABPC1-201ENST00000318607 L1TD1Q5T7N2 865 aaKnown RBP18.06■□□□□ 0.48
PABPC1-201ENST00000318607 APBB1O00213 710 aa18.05■□□□□ 0.48
PABPC1-201ENST00000318607 TRAK2O60296 914 aa18.04■□□□□ 0.48
PABPC1-201ENST00000318607 U2AF1L5P0DN76 240 aaPredicted RBP18.04■□□□□ 0.48
PABPC1-201ENST00000318607 U2AF1Q01081 240 aaKnown RBP eCLIP18.04■□□□□ 0.48
PABPC1-201ENST00000318607 FOXD4L5Q5VV16 416 aaPredicted RBP18.04■□□□□ 0.48
PABPC1-201ENST00000318607 MORC1Q86VD1 984 aa18.04■□□□□ 0.48
PABPC1-201ENST00000318607 FOXD4L4Q8WXT5 416 aaPredicted RBP18.04■□□□□ 0.48
PABPC1-201ENST00000318607 ELL2O00472 640 aaPredicted RBP18.04■□□□□ 0.48
PABPC1-201ENST00000318607 WDR7Q9Y4E6 1490 aa18.04■□□□□ 0.48
PABPC1-201ENST00000318607 MYH16Q9H6N6 1097 aa18.04■□□□□ 0.48
PABPC1-201ENST00000318607 ARHGEF5Q12774 1597 aa18.04■□□□□ 0.48
PABPC1-201ENST00000318607 HSP90AB1P08238 724 aaKnown RBP18.03■□□□□ 0.48
PABPC1-201ENST00000318607 TRAK1Q9UPV9 953 aa18.03■□□□□ 0.48
PABPC1-201ENST00000318607 CAMSAP2Q08AD1 1489 aa18.02■□□□□ 0.48
PABPC1-201ENST00000318607 KIF13AQ9H1H9 1805 aa18.02■□□□□ 0.48
PABPC1-201ENST00000318607 CARMIL2Q6F5E8 1435 aa18.02■□□□□ 0.48
PABPC1-201ENST00000318607 GLIPR1L2Q4G1C9 344 aa18.02■□□□□ 0.48
PABPC1-201ENST00000318607 RIMBP3CA6NJZ7 1639 aa18.02■□□□□ 0.48
PABPC1-201ENST00000318607 RIMBP3BA6NNM3 1639 aa18.02■□□□□ 0.48
PABPC1-201ENST00000318607 RIMBP3Q9UFD9 1639 aa18.02■□□□□ 0.48
PABPC1-201ENST00000318607 NUP153P49790 1475 aaKnown RBP18.02■□□□□ 0.47
PABPC1-201ENST00000318607 TROQ12816 1431 aaPredicted RBP18.02■□□□□ 0.47
PABPC1-201ENST00000318607 CFAP70Q5T0N1 1121 aa18.02■□□□□ 0.47
PABPC1-201ENST00000318607 LNPKQ9C0E8 428 aa18.02■□□□□ 0.47
PABPC1-201ENST00000318607 E9PSI1 815 aa18.01■□□□□ 0.47
PABPC1-201ENST00000318607 CDC42BPBQ9Y5S2 1711 aa18■□□□□ 0.47
PABPC1-201ENST00000318607 HSCBQ8IWL3 235 aa18■□□□□ 0.47
PABPC1-201ENST00000318607 TCP11L2Q8N4U5 519 aa18■□□□□ 0.47
PABPC1-201ENST00000318607 MPNDQ8N594 471 aa18■□□□□ 0.47
PABPC1-201ENST00000318607 C22orf23Q9BZE7 217 aa18■□□□□ 0.47
PABPC1-201ENST00000318607 USP19O94966 1318 aa18■□□□□ 0.47
PABPC1-201ENST00000318607 MCM4P33991 863 aa18■□□□□ 0.47
PABPC1-201ENST00000318607 RBM10P98175 930 aaKnown RBP18■□□□□ 0.47
PABPC1-201ENST00000318607 FAM135AQ9P2D6 1515 aa17.99■□□□□ 0.47
PABPC1-201ENST00000318607 SMC4Q9NTJ3 1288 aa17.99■□□□□ 0.47
PABPC1-201ENST00000318607 C9orf84Q5VXU9 1444 aa17.99■□□□□ 0.47
PABPC1-201ENST00000318607 ERBINQ96RT1 1412 aa17.99■□□□□ 0.47
PABPC1-201ENST00000318607 FOXD4L6Q3SYB3 417 aaPredicted RBP17.98■□□□□ 0.47
PABPC1-201ENST00000318607 FOXD4L3Q6VB84 417 aaPredicted RBP17.98■□□□□ 0.47
PABPC1-201ENST00000318607 AMER1Q5JTC6 1135 aaPredicted RBP17.98■□□□□ 0.47
PABPC1-201ENST00000318607 WWC1Q8IX03 1113 aa17.98■□□□□ 0.47
PABPC1-201ENST00000318607 ZMYND15Q9H091 742 aa17.97■□□□□ 0.47
PABPC1-201ENST00000318607 SLC12A5Q9H2X9 1139 aa17.97■□□□□ 0.47
PABPC1-201ENST00000318607 C1orf115Q9H7X2 142 aa17.97■□□□□ 0.47
PABPC1-201ENST00000318607 CGNL1Q0VF96 1302 aa17.97■□□□□ 0.47
PABPC1-201ENST00000318607 NEURL4Q96JN8 1562 aa17.96■□□□□ 0.47
PABPC1-201ENST00000318607 DEPDC5O75140 1603 aa17.96■□□□□ 0.47
PABPC1-201ENST00000318607 PDE4CQ08493 712 aa17.96■□□□□ 0.47
PABPC1-201ENST00000318607 TMEM132EQ6IEE7 984 aa17.96■□□□□ 0.47
PABPC1-201ENST00000318607 RWDD1Q9H446 243 aaPredicted RBP17.96■□□□□ 0.47
PABPC1-201ENST00000318607 PLXNC1O60486 1568 aa17.96■□□□□ 0.47
PABPC1-201ENST00000318607 ABCC10Q5T3U5 1492 aa17.96■□□□□ 0.47
PABPC1-201ENST00000318607 MYO5CQ9NQX4 1742 aa17.95■□□□□ 0.46
PABPC1-201ENST00000318607 MAPK8IP3Q9UPT6 1336 aa17.95■□□□□ 0.46
PABPC1-201ENST00000318607 GPATCH8Q9UKJ3 1502 aaKnown RBP17.94■□□□□ 0.46
PABPC1-201ENST00000318607 RALGAPBQ86X10 1494 aa17.94■□□□□ 0.46
PABPC1-201ENST00000318607 MTHFSP49914 203 aa17.93■□□□□ 0.46
PABPC1-201ENST00000318607 RBM42Q9BTD8 480 aaKnown RBP17.92■□□□□ 0.46
PABPC1-201ENST00000318607 STK26Q9P289 416 aa17.92■□□□□ 0.46
PABPC1-201ENST00000318607 KDM5CP41229 1560 aa17.92■□□□□ 0.46
PABPC1-201ENST00000318607 PMFBP1Q8TBY8 1022 aa17.92■□□□□ 0.46
PABPC1-201ENST00000318607 EIF2AK4Q9P2K8 1649 aaKnown RBP17.91■□□□□ 0.46
PABPC1-201ENST00000318607 RARSP54136 660 aaKnown RBP17.91■□□□□ 0.46
PABPC1-201ENST00000318607 CDCA8Q53HL2 280 aa17.9■□□□□ 0.46
PABPC1-201ENST00000318607 NOL8Q76FK4 1167 aaKnown RBP17.9■□□□□ 0.46
PABPC1-201ENST00000318607 TBC1D32Q96NH3 1257 aa17.9■□□□□ 0.46
PABPC1-201ENST00000318607 AFAP1Q8N556 730 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms