RNA–Protein interactions for RNA: ENST00000318129.5

GINS3-201, Transcript of GINS complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS3, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-201ENST00000318129 PRAG1Q86YV5 1406 aa14.23□□□□□ -0.13
GINS3-201ENST00000318129 CEBPAP49715 358 aaPredicted RBP14.22□□□□□ -0.13
GINS3-201ENST00000318129 TMEM131LA2VDJ0 1609 aa14.22□□□□□ -0.13
GINS3-201ENST00000318129 MYOM2P54296 1465 aa14.21□□□□□ -0.13
GINS3-201ENST00000318129 NLRP1Q9C000 1473 aa14.21□□□□□ -0.13
GINS3-201ENST00000318129 IFT172Q9UG01 1749 aa14.2□□□□□ -0.14
GINS3-201ENST00000318129 RALGAPBQ86X10 1494 aa14.2□□□□□ -0.14
GINS3-201ENST00000318129 VGFO15240 615 aaPredicted RBP14.2□□□□□ -0.14
GINS3-201ENST00000318129 PLPPR3Q6T4P5 718 aa14.2□□□□□ -0.14
GINS3-201ENST00000318129 KDM5AP29375 1690 aaKnown RBP14.19□□□□□ -0.14
GINS3-201ENST00000318129 PPLO60437 1756 aa14.19□□□□□ -0.14
GINS3-201ENST00000318129 ZFYVE9O95405 1425 aa14.19□□□□□ -0.14
GINS3-201ENST00000318129 A2ML1A8K2U0 1454 aa14.18□□□□□ -0.14
GINS3-201ENST00000318129 HDGFP51858 240 aaKnown RBP14.18□□□□□ -0.14
GINS3-201ENST00000318129 NRXN1Q9ULB1 1477 aa14.17□□□□□ -0.14
GINS3-201ENST00000318129 MYO5BQ9ULV0 1848 aa14.17□□□□□ -0.14
GINS3-201ENST00000318129 NEXMIFQ5QGS0 1516 aa14.16□□□□□ -0.14
GINS3-201ENST00000318129 TRPM1Q7Z4N2 1603 aa14.16□□□□□ -0.14
GINS3-201ENST00000318129 EIF4G2P78344 907 aaKnown RBP eCLIP14.16□□□□□ -0.14
GINS3-201ENST00000318129 SETD1BQ9UPS6 1966 aaKnown RBP14.16□□□□□ -0.14
GINS3-201ENST00000318129 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.16□□□□□ -0.14
GINS3-201ENST00000318129 ROCK2O75116 1388 aaKnown RBP14.16□□□□□ -0.14
GINS3-201ENST00000318129 ADGRF5Q8IZF2 1346 aa14.15□□□□□ -0.14
GINS3-201ENST00000318129 KIAA1210Q9ULL0 1709 aa14.15□□□□□ -0.14
GINS3-201ENST00000318129 GPRASP1Q5JY77 1395 aa14.15□□□□□ -0.14
GINS3-201ENST00000318129 CARD11Q9BXL7 1154 aa14.15□□□□□ -0.14
GINS3-201ENST00000318129 PTPRMP28827 1452 aa14.14□□□□□ -0.15
GINS3-201ENST00000318129 UBR1Q8IWV7 1749 aa14.13□□□□□ -0.15
GINS3-201ENST00000318129 RIMS2Q9UQ26 1411 aa14.13□□□□□ -0.15
GINS3-201ENST00000318129 THEMISQ8N1K5 641 aaPredicted RBP14.12□□□□□ -0.15
GINS3-201ENST00000318129 PIK3C2GO75747 1445 aa14.12□□□□□ -0.15
GINS3-201ENST00000318129 LAMC1P11047 1609 aa14.12□□□□□ -0.15
GINS3-201ENST00000318129 C14orf93Q9H972 538 aaKnown RBP14.12□□□□□ -0.15
GINS3-201ENST00000318129 MYO3AQ8NEV4 1616 aa14.12□□□□□ -0.15
GINS3-201ENST00000318129 HSPA5P11021 654 aaKnown RBP14.11□□□□□ -0.15
GINS3-201ENST00000318129 NBPF1Q3BBV0 1214 aa14.11□□□□□ -0.15
GINS3-201ENST00000318129 TMEM2Q9UHN6 1383 aa14.11□□□□□ -0.15
GINS3-201ENST00000318129 RBM19Q9Y4C8 960 aaKnown RBP14.11□□□□□ -0.15
GINS3-201ENST00000318129 USP47Q96K76 1375 aa14.1□□□□□ -0.15
GINS3-201ENST00000318129 CFAP70Q5T0N1 1121 aa14.1□□□□□ -0.15
GINS3-201ENST00000318129 NUTM2DQ5VT03 806 aaPredicted RBP14.1□□□□□ -0.15
GINS3-201ENST00000318129 CEP170BQ9Y4F5 1589 aaPredicted RBP14.09□□□□□ -0.15
GINS3-201ENST00000318129 SENP3Q9H4L4 574 aaPredicted RBP14.08□□□□□ -0.16
GINS3-201ENST00000318129 EID1Q9Y6B2 187 aa14.08□□□□□ -0.16
GINS3-201ENST00000318129 SETBP1Q9Y6X0 1596 aa14.08□□□□□ -0.16
GINS3-201ENST00000318129 SLIT1O75093 1534 aa14.08□□□□□ -0.16
GINS3-201ENST00000318129 ZNF142P52746 1687 aaPredicted RBP14.07□□□□□ -0.16
GINS3-201ENST00000318129 ARHGAP23Q9P227 1491 aa14.07□□□□□ -0.16
GINS3-201ENST00000318129 ERICH6Q7L0X2 663 aa14.07□□□□□ -0.16
GINS3-201ENST00000318129 KDM4FA0A1W2PPD8 638 aa14.06□□□□□ -0.16
GINS3-201ENST00000318129 SCAF11Q99590 1463 aaKnown RBP14.05□□□□□ -0.16
GINS3-201ENST00000318129 TXNDC2Q86VQ3 553 aa14.05□□□□□ -0.16
GINS3-201ENST00000318129 HIRIP3Q9BW71 556 aaPredicted RBP14.04□□□□□ -0.16
GINS3-201ENST00000318129 EIF3AQ14152 1382 aaKnown RBP14.04□□□□□ -0.16
GINS3-201ENST00000318129 PLEKHG1Q9ULL1 1385 aa14.03□□□□□ -0.16
GINS3-201ENST00000318129 IQGAP1P46940 1657 aa14.03□□□□□ -0.16
GINS3-201ENST00000318129 ALKQ9UM73 1620 aa14.02□□□□□ -0.16
GINS3-201ENST00000318129 ST20-MTHFSA0A0A6YYL1 179 aa14.02□□□□□ -0.16
GINS3-201ENST00000318129 MSH5O43196 834 aa14.02□□□□□ -0.16
GINS3-201ENST00000318129 LTKP29376 864 aa14.02□□□□□ -0.16
GINS3-201ENST00000318129 BCANQ96GW7 911 aa14.02□□□□□ -0.16
GINS3-201ENST00000318129 ADGRB1O14514 1584 aa14.02□□□□□ -0.17
GINS3-201ENST00000318129 SLC24A1O60721 1099 aa14.02□□□□□ -0.17
GINS3-201ENST00000318129 ANKLE2Q86XL3 938 aa14.01□□□□□ -0.17
GINS3-201ENST00000318129 TMEM132EQ6IEE7 984 aa14□□□□□ -0.17
GINS3-201ENST00000318129 FKBP8Q14318 412 aa13.99□□□□□ -0.17
GINS3-201ENST00000318129 NRXN3Q9Y4C0 1643 aa13.98□□□□□ -0.17
GINS3-201ENST00000318129 TBX22Q9Y458 520 aa13.97□□□□□ -0.17
GINS3-201ENST00000318129 YTHDC2Q9H6S0 1430 aaKnown RBP13.97□□□□□ -0.17
GINS3-201ENST00000318129 SETD1AO15047 1707 aaKnown RBP13.96□□□□□ -0.17
GINS3-201ENST00000318129 ASXL1Q8IXJ9 1541 aa13.96□□□□□ -0.17
GINS3-201ENST00000318129 TESK2Q96S53 571 aa13.96□□□□□ -0.17
GINS3-201ENST00000318129 TRAK1Q9UPV9 953 aa13.96□□□□□ -0.17
GINS3-201ENST00000318129 ADAMTS13Q76LX8 1427 aa13.96□□□□□ -0.17
GINS3-201ENST00000318129 LRPPRCP42704 1394 aaKnown RBP13.96□□□□□ -0.17
GINS3-201ENST00000318129 CCDC7Q96M83 1385 aa13.96□□□□□ -0.17
GINS3-201ENST00000318129 POLR1AO95602 1720 aaPredicted RBP13.96□□□□□ -0.18
GINS3-201ENST00000318129 DIP2AQ14689 1571 aa13.96□□□□□ -0.18
GINS3-201ENST00000318129 MED14O60244 1454 aa13.95□□□□□ -0.18
GINS3-201ENST00000318129 CENPJQ9HC77 1338 aaPredicted RBP13.95□□□□□ -0.18
GINS3-201ENST00000318129 TMF1P82094 1093 aa13.95□□□□□ -0.18
GINS3-201ENST00000318129 WASHC2AQ641Q2 1341 aa13.95□□□□□ -0.18
GINS3-201ENST00000318129 ABCC11Q96J66 1382 aa13.94□□□□□ -0.18
GINS3-201ENST00000318129 C11orf95C9JLR9 678 aaPredicted RBP13.94□□□□□ -0.18
GINS3-201ENST00000318129 CDCA8Q53HL2 280 aa13.94□□□□□ -0.18
GINS3-201ENST00000318129 SIRT1Q96EB6 747 aa13.94□□□□□ -0.18
GINS3-201ENST00000318129 STK26Q9P289 416 aa13.94□□□□□ -0.18
GINS3-201ENST00000318129 SBNO2Q9Y2G9 1366 aa13.94□□□□□ -0.18
GINS3-201ENST00000318129 KIF7Q2M1P5 1343 aa13.94□□□□□ -0.18
GINS3-201ENST00000318129 DLC1Q96QB1 1528 aa13.93□□□□□ -0.18
GINS3-201ENST00000318129 METP08581 1390 aa13.93□□□□□ -0.18
GINS3-201ENST00000318129 ARHGEF28Q8N1W1 1705 aaKnown RBP13.92□□□□□ -0.18
GINS3-201ENST00000318129 PIK3R4Q99570 1358 aa13.92□□□□□ -0.18
GINS3-201ENST00000318129 FANCIQ9NVI1 1328 aa13.91□□□□□ -0.18
GINS3-201ENST00000318129 DDX10Q13206 875 aaKnown RBP13.91□□□□□ -0.18
GINS3-201ENST00000318129 SLC26A8Q96RN1 970 aa13.91□□□□□ -0.18
GINS3-201ENST00000318129 TECPR2O15040 1411 aa13.91□□□□□ -0.18
GINS3-201ENST00000318129 POGKQ9P215 609 aa13.9□□□□□ -0.18
GINS3-201ENST00000318129 NPHP4O75161 1426 aaPredicted RBP13.9□□□□□ -0.18
GINS3-201ENST00000318129 KNDC1Q76NI1 1749 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms