RNA–Protein interactions for RNA: ENST00000311873.9

ZC3HC1-201, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2 BASIC

Gene ZC3HC1, Length 2,017 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-201ENST00000311873 SETD1BQ9UPS6 1966 aaKnown RBP16.59■□□□□ 0.25
ZC3HC1-201ENST00000311873 ZNF142P52746 1687 aaPredicted RBP16.58■□□□□ 0.24
ZC3HC1-201ENST00000311873 KDM5AP29375 1690 aaKnown RBP16.57■□□□□ 0.24
ZC3HC1-201ENST00000311873 PRAG1Q86YV5 1406 aa16.57■□□□□ 0.24
ZC3HC1-201ENST00000311873 ZFYVE9O95405 1425 aa16.56■□□□□ 0.24
ZC3HC1-201ENST00000311873 RIMS2Q9UQ26 1411 aa16.56■□□□□ 0.24
ZC3HC1-201ENST00000311873 UHRF1BP1Q6BDS2 1440 aa16.56■□□□□ 0.24
ZC3HC1-201ENST00000311873 TMEM2Q9UHN6 1383 aa16.55■□□□□ 0.24
ZC3HC1-201ENST00000311873 MYOM2P54296 1465 aa16.55■□□□□ 0.24
ZC3HC1-201ENST00000311873 LTKP29376 864 aa16.54■□□□□ 0.24
ZC3HC1-201ENST00000311873 NRXN1Q9ULB1 1477 aa16.53■□□□□ 0.24
ZC3HC1-201ENST00000311873 RPGRIP1LQ68CZ1 1315 aa16.53■□□□□ 0.24
ZC3HC1-201ENST00000311873 NBPF1Q3BBV0 1214 aa16.52■□□□□ 0.23
ZC3HC1-201ENST00000311873 TRPM1Q7Z4N2 1603 aa16.52■□□□□ 0.23
ZC3HC1-201ENST00000311873 SLIT1O75093 1534 aa16.51■□□□□ 0.23
ZC3HC1-201ENST00000311873 ARHGAP23Q9P227 1491 aa16.51■□□□□ 0.23
ZC3HC1-201ENST00000311873 PIK3C2GO75747 1445 aa16.51■□□□□ 0.23
ZC3HC1-201ENST00000311873 HSPA2P54652 639 aa16.51■□□□□ 0.23
ZC3HC1-201ENST00000311873 CFAP70Q5T0N1 1121 aa16.5■□□□□ 0.23
ZC3HC1-201ENST00000311873 THEMISQ8N1K5 641 aaPredicted RBP16.5■□□□□ 0.23
ZC3HC1-201ENST00000311873 LMTK3Q96Q04 1460 aa16.5■□□□□ 0.23
ZC3HC1-201ENST00000311873 TXNDC2Q86VQ3 553 aa16.49■□□□□ 0.23
ZC3HC1-201ENST00000311873 RALGAPBQ86X10 1494 aa16.49■□□□□ 0.23
ZC3HC1-201ENST00000311873 VGFO15240 615 aaPredicted RBP16.48■□□□□ 0.23
ZC3HC1-201ENST00000311873 NRXN3Q9Y4C0 1643 aa16.48■□□□□ 0.23
ZC3HC1-201ENST00000311873 IQGAP1P46940 1657 aa16.47■□□□□ 0.23
ZC3HC1-201ENST00000311873 SCAF11Q99590 1463 aaKnown RBP16.45■□□□□ 0.22
ZC3HC1-201ENST00000311873 ROCK2O75116 1388 aaKnown RBP16.45■□□□□ 0.22
ZC3HC1-201ENST00000311873 HIRIP3Q9BW71 556 aaPredicted RBP16.45■□□□□ 0.22
ZC3HC1-201ENST00000311873 TMEM132EQ6IEE7 984 aa16.45■□□□□ 0.22
ZC3HC1-201ENST00000311873 ASXL1Q8IXJ9 1541 aa16.45■□□□□ 0.22
ZC3HC1-201ENST00000311873 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.44■□□□□ 0.22
ZC3HC1-201ENST00000311873 NCKAP5LQ9HCH0 1330 aa16.44■□□□□ 0.22
ZC3HC1-201ENST00000311873 ALKQ9UM73 1620 aa16.44■□□□□ 0.22
ZC3HC1-201ENST00000311873 STAC3Q96MF2 364 aa16.43■□□□□ 0.22
ZC3HC1-201ENST00000311873 C14orf93Q9H972 538 aaKnown RBP16.43■□□□□ 0.22
ZC3HC1-201ENST00000311873 EID1Q9Y6B2 187 aa16.43■□□□□ 0.22
ZC3HC1-201ENST00000311873 SETD1AO15047 1707 aaKnown RBP16.43■□□□□ 0.22
ZC3HC1-201ENST00000311873 ADGRB1O14514 1584 aa16.42■□□□□ 0.22
ZC3HC1-201ENST00000311873 BCANQ96GW7 911 aa16.42■□□□□ 0.22
ZC3HC1-201ENST00000311873 KIAA1210Q9ULL0 1709 aa16.42■□□□□ 0.22
ZC3HC1-201ENST00000311873 PLEKHG1Q9ULL1 1385 aa16.42■□□□□ 0.22
ZC3HC1-201ENST00000311873 SETBP1Q9Y6X0 1596 aa16.42■□□□□ 0.22
ZC3HC1-201ENST00000311873 ADAMTS13Q76LX8 1427 aa16.42■□□□□ 0.22
ZC3HC1-201ENST00000311873 SLC26A8Q96RN1 970 aa16.41■□□□□ 0.22
ZC3HC1-201ENST00000311873 CARD11Q9BXL7 1154 aa16.41■□□□□ 0.22
ZC3HC1-201ENST00000311873 POLR1AO95602 1720 aaPredicted RBP16.41■□□□□ 0.22
ZC3HC1-201ENST00000311873 ANKLE2Q86XL3 938 aa16.41■□□□□ 0.22
ZC3HC1-201ENST00000311873 GPRASP1Q5JY77 1395 aa16.41■□□□□ 0.22
ZC3HC1-201ENST00000311873 METP08581 1390 aa16.4■□□□□ 0.22
ZC3HC1-201ENST00000311873 HDGFP51858 240 aaKnown RBP16.4■□□□□ 0.22
ZC3HC1-201ENST00000311873 LAMC1P11047 1609 aa16.39■□□□□ 0.21
ZC3HC1-201ENST00000311873 USP47Q96K76 1375 aa16.38■□□□□ 0.21
ZC3HC1-201ENST00000311873 STRCQ7RTU9 1775 aa16.37■□□□□ 0.21
ZC3HC1-201ENST00000311873 MED14O60244 1454 aa16.37■□□□□ 0.21
ZC3HC1-201ENST00000311873 HSPA5P11021 654 aaKnown RBP16.37■□□□□ 0.21
ZC3HC1-201ENST00000311873 STK26Q9P289 416 aa16.36■□□□□ 0.21
ZC3HC1-201ENST00000311873 NPHP4O75161 1426 aaPredicted RBP16.36■□□□□ 0.21
ZC3HC1-201ENST00000311873 TRAK1Q9UPV9 953 aa16.35■□□□□ 0.21
ZC3HC1-201ENST00000311873 PTPRUQ92729 1446 aa16.33■□□□□ 0.2
ZC3HC1-201ENST00000311873 EIF4G2P78344 907 aaKnown RBP eCLIP16.33■□□□□ 0.2
ZC3HC1-201ENST00000311873 YTHDC2Q9H6S0 1430 aaKnown RBP16.33■□□□□ 0.2
ZC3HC1-201ENST00000311873 ST20-MTHFSA0A0A6YYL1 179 aa16.32■□□□□ 0.2
ZC3HC1-201ENST00000311873 ARHGEF28Q8N1W1 1705 aaKnown RBP16.31■□□□□ 0.2
ZC3HC1-201ENST00000311873 TBX22Q9Y458 520 aa16.3■□□□□ 0.2
ZC3HC1-201ENST00000311873 DIP2AQ14689 1571 aa16.3■□□□□ 0.2
ZC3HC1-201ENST00000311873 LRPPRCP42704 1394 aaKnown RBP16.28■□□□□ 0.2
ZC3HC1-201ENST00000311873 SAFB2Q14151 953 aaKnown RBP eCLIP16.28■□□□□ 0.2
ZC3HC1-201ENST00000311873 PLEKHH1Q9ULM0 1364 aa16.28■□□□□ 0.2
ZC3HC1-201ENST00000311873 C11orf95C9JLR9 678 aaPredicted RBP16.28■□□□□ 0.2
ZC3HC1-201ENST00000311873 WAPLQ7Z5K2 1190 aa16.27■□□□□ 0.2
ZC3HC1-201ENST00000311873 ROBO2Q9HCK4 1378 aa16.27■□□□□ 0.19
ZC3HC1-201ENST00000311873 PRAM1Q96QH2 718 aa16.26■□□□□ 0.19
ZC3HC1-201ENST00000311873 TESK2Q96S53 571 aa16.26■□□□□ 0.19
ZC3HC1-201ENST00000311873 AMOTL2Q9Y2J4 779 aa16.26■□□□□ 0.19
ZC3HC1-201ENST00000311873 XRN1Q8IZH2 1706 aaKnown RBP16.25■□□□□ 0.19
ZC3HC1-201ENST00000311873 ZNF316A6NFI3 1004 aaPredicted RBP16.25■□□□□ 0.19
ZC3HC1-201ENST00000311873 KCNA6P17658 529 aa16.25■□□□□ 0.19
ZC3HC1-201ENST00000311873 AEBP2Q6ZN18 517 aaPredicted RBP16.25■□□□□ 0.19
ZC3HC1-201ENST00000311873 CHD2O14647 1828 aaKnown RBP16.25■□□□□ 0.19
ZC3HC1-201ENST00000311873 ABCC11Q96J66 1382 aa16.25■□□□□ 0.19
ZC3HC1-201ENST00000311873 KNDC1Q76NI1 1749 aa16.25■□□□□ 0.19
ZC3HC1-201ENST00000311873 RBM33Q96EV2 1170 aaKnown RBP16.24■□□□□ 0.19
ZC3HC1-201ENST00000311873 QRICH2Q9H0J4 1663 aa16.24■□□□□ 0.19
ZC3HC1-201ENST00000311873 STRCP1A6NGW2 1772 aa16.24■□□□□ 0.19
ZC3HC1-201ENST00000311873 CPS1P31327 1500 aa16.23■□□□□ 0.19
ZC3HC1-201ENST00000311873 CENPJQ9HC77 1338 aaPredicted RBP16.23■□□□□ 0.19
ZC3HC1-201ENST00000311873 TECPR2O15040 1411 aa16.23■□□□□ 0.19
ZC3HC1-201ENST00000311873 EIF3AQ14152 1382 aaKnown RBP16.22■□□□□ 0.19
ZC3HC1-201ENST00000311873 DISP3Q9P2K9 1392 aa16.22■□□□□ 0.19
ZC3HC1-201ENST00000311873 DLC1Q96QB1 1528 aa16.22■□□□□ 0.19
ZC3HC1-201ENST00000311873 PIK3R4Q99570 1358 aa16.2■□□□□ 0.18
ZC3HC1-201ENST00000311873 MINK1Q8N4C8 1332 aaPredicted RBP16.2■□□□□ 0.18
ZC3HC1-201ENST00000311873 POGKQ9P215 609 aa16.2■□□□□ 0.18
ZC3HC1-201ENST00000311873 WASHC2AQ641Q2 1341 aa16.19■□□□□ 0.18
ZC3HC1-201ENST00000311873 ZNF335Q9H4Z2 1342 aaPredicted RBP16.19■□□□□ 0.18
ZC3HC1-201ENST00000311873 NWD1Q149M9 1564 aa16.19■□□□□ 0.18
ZC3HC1-201ENST00000311873 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.19■□□□□ 0.18
ZC3HC1-201ENST00000311873 PTCH1Q13635 1447 aa16.18■□□□□ 0.18
ZC3HC1-201ENST00000311873 TULP4Q9NRJ4 1543 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms