RNA–Protein interactions for RNA: ENST00000310931.8

HDLBP-201, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-201ENST00000310931 A0A0U1RQG5 324 aaPredicted RBP12.51□□□□□ -0.41
HDLBP-201ENST00000310931 ABCC3O15438 1527 aa12.51□□□□□ -0.41
HDLBP-201ENST00000310931 ANO8Q9HCE9 1232 aaPredicted RBP12.5□□□□□ -0.41
HDLBP-201ENST00000310931 RPGRIP1LQ68CZ1 1315 aa12.5□□□□□ -0.41
HDLBP-201ENST00000310931 SLC52A1Q9NWF4 448 aa12.5□□□□□ -0.41
HDLBP-201ENST00000310931 PNNQ9H307 717 aaKnown RBP12.5□□□□□ -0.41
HDLBP-201ENST00000310931 SPHKAPQ2M3C7 1700 aa12.49□□□□□ -0.41
HDLBP-201ENST00000310931 HSP90AA2PQ14568 343 aaPredicted RBP12.49□□□□□ -0.41
HDLBP-201ENST00000310931 MROH1Q8NDA8 1641 aa12.48□□□□□ -0.41
HDLBP-201ENST00000310931 HDGFP51858 240 aaKnown RBP12.48□□□□□ -0.41
HDLBP-201ENST00000310931 CAMSAP1Q5T5Y3 1602 aa12.48□□□□□ -0.41
HDLBP-201ENST00000310931 L3MBTL2Q969R5 705 aa12.47□□□□□ -0.41
HDLBP-201ENST00000310931 FOXD1Q16676 465 aa12.47□□□□□ -0.41
HDLBP-201ENST00000310931 E9PCH4 1651 aa12.47□□□□□ -0.41
HDLBP-201ENST00000310931 UHRF1BP1Q6BDS2 1440 aa12.46□□□□□ -0.41
HDLBP-201ENST00000310931 BECN1Q14457 450 aa12.45□□□□□ -0.42
HDLBP-201ENST00000310931 PTMAP06454 111 aaKnown RBP12.45□□□□□ -0.42
HDLBP-201ENST00000310931 EIF4G2P78344 907 aaKnown RBP eCLIP12.45□□□□□ -0.42
HDLBP-201ENST00000310931 CEP152O94986 1710 aa12.44□□□□□ -0.42
HDLBP-201ENST00000310931 ARID3AQ99856 593 aa12.43□□□□□ -0.42
HDLBP-201ENST00000310931 SALL2Q9Y467 1007 aaPredicted RBP12.43□□□□□ -0.42
HDLBP-201ENST00000310931 RSPH6AQ9H0K4 717 aa12.43□□□□□ -0.42
HDLBP-201ENST00000310931 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
HDLBP-201ENST00000310931 NOS1P29475 1434 aa12.42□□□□□ -0.42
HDLBP-201ENST00000310931 ZNF326Q5BKZ1 582 aaKnown RBP12.42□□□□□ -0.42
HDLBP-201ENST00000310931 NPATQ14207 1427 aa12.42□□□□□ -0.42
HDLBP-201ENST00000310931 KIF1BO60333 1816 aa12.42□□□□□ -0.42
HDLBP-201ENST00000310931 DCAF11Q8TEB1 546 aa12.41□□□□□ -0.42
HDLBP-201ENST00000310931 MROH2AA6NES4 1674 aa12.41□□□□□ -0.42
HDLBP-201ENST00000310931 COL17A1Q9UMD9 1497 aaPredicted RBP12.41□□□□□ -0.42
HDLBP-201ENST00000310931 RALGAPBQ86X10 1494 aa12.4□□□□□ -0.42
HDLBP-201ENST00000310931 EIF3AQ14152 1382 aaKnown RBP12.4□□□□□ -0.42
HDLBP-201ENST00000310931 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.4□□□□□ -0.42
HDLBP-201ENST00000310931 PLA2R1Q13018 1463 aa12.4□□□□□ -0.42
HDLBP-201ENST00000310931 MYOM2P54296 1465 aa12.39□□□□□ -0.43
HDLBP-201ENST00000310931 VGFO15240 615 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-201ENST00000310931 PPP4R2Q9NY27 417 aa12.39□□□□□ -0.43
HDLBP-201ENST00000310931 SPATA31E1Q6ZUB1 1445 aa12.38□□□□□ -0.43
HDLBP-201ENST00000310931 ERVK-7P63135 1459 aa12.38□□□□□ -0.43
HDLBP-201ENST00000310931 L1TD1Q5T7N2 865 aaKnown RBP12.38□□□□□ -0.43
HDLBP-201ENST00000310931 GOLGA6L22H0YM25 854 aa12.38□□□□□ -0.43
HDLBP-201ENST00000310931 CHGAP10645 457 aaKnown RBP12.38□□□□□ -0.43
HDLBP-201ENST00000310931 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-201ENST00000310931 CLTCL1P53675 1640 aa12.37□□□□□ -0.43
HDLBP-201ENST00000310931 TNNT3P45378 269 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-201ENST00000310931 HIRIP3Q9BW71 556 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-201ENST00000310931 MLECQ14165 292 aa12.37□□□□□ -0.43
HDLBP-201ENST00000310931 ROCK2O75116 1388 aaKnown RBP12.37□□□□□ -0.43
HDLBP-201ENST00000310931 RGL3Q3MIN7 710 aa12.37□□□□□ -0.43
HDLBP-201ENST00000310931 ADGRB3O60242 1522 aa12.36□□□□□ -0.43
HDLBP-201ENST00000310931 KDM2AQ9Y2K7 1162 aa12.36□□□□□ -0.43
HDLBP-201ENST00000310931 SPATA31D1Q6ZQQ2 1576 aa12.36□□□□□ -0.43
HDLBP-201ENST00000310931 PRAG1Q86YV5 1406 aa12.36□□□□□ -0.43
HDLBP-201ENST00000310931 CLTCQ00610 1675 aaKnown RBP12.35□□□□□ -0.43
HDLBP-201ENST00000310931 LAMC1P11047 1609 aa12.35□□□□□ -0.43
HDLBP-201ENST00000310931 CDCA8Q53HL2 280 aa12.35□□□□□ -0.43
HDLBP-201ENST00000310931 CARD11Q9BXL7 1154 aa12.35□□□□□ -0.43
HDLBP-201ENST00000310931 MRS2Q9HD23 443 aa12.35□□□□□ -0.43
HDLBP-201ENST00000310931 PREX1Q8TCU6 1659 aa12.35□□□□□ -0.43
HDLBP-201ENST00000310931 ZMYM3Q14202 1370 aa12.35□□□□□ -0.43
HDLBP-201ENST00000310931 TNRQ92752 1358 aa12.35□□□□□ -0.43
HDLBP-201ENST00000310931 NLRP1Q9C000 1473 aa12.35□□□□□ -0.43
HDLBP-201ENST00000310931 B4GALNT3Q6L9W6 998 aa12.34□□□□□ -0.43
HDLBP-201ENST00000310931 ZFYVE9O95405 1425 aa12.34□□□□□ -0.43
HDLBP-201ENST00000310931 MSNP26038 577 aaKnown RBP12.33□□□□□ -0.43
HDLBP-201ENST00000310931 KIAA1210Q9ULL0 1709 aa12.33□□□□□ -0.44
HDLBP-201ENST00000310931 PIK3C2BO00750 1634 aa12.33□□□□□ -0.44
HDLBP-201ENST00000310931 GPRASP1Q5JY77 1395 aa12.32□□□□□ -0.44
HDLBP-201ENST00000310931 KDM5AP29375 1690 aaKnown RBP12.31□□□□□ -0.44
HDLBP-201ENST00000310931 USP47Q96K76 1375 aa12.3□□□□□ -0.44
HDLBP-201ENST00000310931 HSPA5P11021 654 aaKnown RBP12.29□□□□□ -0.44
HDLBP-201ENST00000310931 TMC1Q8TDI8 760 aa12.29□□□□□ -0.44
HDLBP-201ENST00000310931 FER1L4A9Z1Z3 1794 aa12.29□□□□□ -0.44
HDLBP-201ENST00000310931 SYNMO15061 1565 aa12.29□□□□□ -0.44
HDLBP-201ENST00000310931 EID1Q9Y6B2 187 aa12.29□□□□□ -0.44
HDLBP-201ENST00000310931 NBPF8Q3BBV2 869 aa12.28□□□□□ -0.44
HDLBP-201ENST00000310931 TRPM1Q7Z4N2 1603 aa12.27□□□□□ -0.44
HDLBP-201ENST00000310931 IDI1Q13907 227 aa12.27□□□□□ -0.44
HDLBP-201ENST00000310931 MADDQ8WXG6 1647 aa12.27□□□□□ -0.44
HDLBP-201ENST00000310931 SCAF11Q99590 1463 aaKnown RBP12.27□□□□□ -0.45
HDLBP-201ENST00000310931 NRXN1Q9ULB1 1477 aa12.27□□□□□ -0.45
HDLBP-201ENST00000310931 SETBP1Q9Y6X0 1596 aa12.27□□□□□ -0.45
HDLBP-201ENST00000310931 THEMISQ8N1K5 641 aaPredicted RBP12.27□□□□□ -0.45
HDLBP-201ENST00000310931 TMF1P82094 1093 aa12.26□□□□□ -0.45
HDLBP-201ENST00000310931 UGGT1Q9NYU2 1555 aa12.25□□□□□ -0.45
HDLBP-201ENST00000310931 IFT172Q9UG01 1749 aa12.24□□□□□ -0.45
HDLBP-201ENST00000310931 PPLO60437 1756 aa12.24□□□□□ -0.45
HDLBP-201ENST00000310931 RIMS2Q9UQ26 1411 aa12.24□□□□□ -0.45
HDLBP-201ENST00000310931 CHAF1AQ13111 956 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-201ENST00000310931 C14orf93Q9H972 538 aaKnown RBP12.24□□□□□ -0.45
HDLBP-201ENST00000310931 PLCB2Q00722 1185 aa12.23□□□□□ -0.45
HDLBP-201ENST00000310931 TMEM131LA2VDJ0 1609 aa12.23□□□□□ -0.45
HDLBP-201ENST00000310931 UBE2Q2Q8WVN8 375 aa12.23□□□□□ -0.45
HDLBP-201ENST00000310931 PIK3C2GO75747 1445 aa12.23□□□□□ -0.45
HDLBP-201ENST00000310931 A2ML1A8K2U0 1454 aa12.22□□□□□ -0.45
HDLBP-201ENST00000310931 SIGLEC1Q9BZZ2 1709 aa12.22□□□□□ -0.45
HDLBP-201ENST00000310931 FBXO31Q5XUX0 539 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-201ENST00000310931 NEXMIFQ5QGS0 1516 aa12.22□□□□□ -0.45
HDLBP-201ENST00000310931 IPO9Q96P70 1041 aaKnown RBP12.2□□□□□ -0.46
HDLBP-201ENST00000310931 ADAMTSL3P82987 1691 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms