RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 RPGRIP1LQ68CZ1 1315 aa15.3■□□□□ 0.04
TRIM59-201ENST00000309784 ARHGAP31Q2M1Z3 1444 aa15.29■□□□□ 0.04
TRIM59-201ENST00000309784 AGLP35573 1532 aa15.29■□□□□ 0.04
TRIM59-201ENST00000309784 EIF3AQ14152 1382 aaKnown RBP15.28■□□□□ 0.04
TRIM59-201ENST00000309784 CLTCQ00610 1675 aaKnown RBP15.28■□□□□ 0.04
TRIM59-201ENST00000309784 HDGFP51858 240 aaKnown RBP15.26■□□□□ 0.03
TRIM59-201ENST00000309784 ERVK-7P63135 1459 aa15.26■□□□□ 0.03
TRIM59-201ENST00000309784 POGKQ9P215 609 aa15.26■□□□□ 0.03
TRIM59-201ENST00000309784 TNRQ92752 1358 aa15.26■□□□□ 0.03
TRIM59-201ENST00000309784 ZC3H13Q5T200 1668 aaKnown RBP15.25■□□□□ 0.03
TRIM59-201ENST00000309784 CDCA8Q53HL2 280 aa15.24■□□□□ 0.03
TRIM59-201ENST00000309784 TMC1Q8TDI8 760 aa15.24■□□□□ 0.03
TRIM59-201ENST00000309784 BCORL1Q5H9F3 1711 aa15.24■□□□□ 0.03
TRIM59-201ENST00000309784 C14orf93Q9H972 538 aaKnown RBP15.23■□□□□ 0.03
TRIM59-201ENST00000309784 REREQ9P2R6 1566 aa15.22■□□□□ 0.03
TRIM59-201ENST00000309784 SYNMO15061 1565 aa15.22■□□□□ 0.03
TRIM59-201ENST00000309784 CENPJQ9HC77 1338 aaPredicted RBP15.22■□□□□ 0.03
TRIM59-201ENST00000309784 TRPM1Q7Z4N2 1603 aa15.22■□□□□ 0.03
TRIM59-201ENST00000309784 GPRASP1Q5JY77 1395 aa15.22■□□□□ 0.03
TRIM59-201ENST00000309784 EID1Q9Y6B2 187 aa15.21■□□□□ 0.03
TRIM59-201ENST00000309784 SCAF11Q99590 1463 aaKnown RBP15.21■□□□□ 0.03
TRIM59-201ENST00000309784 SIGLEC1Q9BZZ2 1709 aa15.21■□□□□ 0.02
TRIM59-201ENST00000309784 ADGRB3O60242 1522 aa15.21■□□□□ 0.02
TRIM59-201ENST00000309784 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.2■□□□□ 0.02
TRIM59-201ENST00000309784 MRS2Q9HD23 443 aa15.2■□□□□ 0.02
TRIM59-201ENST00000309784 MROH2AA6NES4 1674 aa15.2■□□□□ 0.02
TRIM59-201ENST00000309784 PREX1Q8TCU6 1659 aa15.2■□□□□ 0.02
TRIM59-201ENST00000309784 CC2D1BQ5T0F9 858 aaKnown RBP15.19■□□□□ 0.02
TRIM59-201ENST00000309784 TXNDC2Q86VQ3 553 aa15.19■□□□□ 0.02
TRIM59-201ENST00000309784 TESK2Q96S53 571 aa15.19■□□□□ 0.02
TRIM59-201ENST00000309784 DISP3Q9P2K9 1392 aa15.19■□□□□ 0.02
TRIM59-201ENST00000309784 MADDQ8WXG6 1647 aa15.19■□□□□ 0.02
TRIM59-201ENST00000309784 MYOM2P54296 1465 aa15.18■□□□□ 0.02
TRIM59-201ENST00000309784 FAM9BQ8IZU0 186 aa15.18■□□□□ 0.02
TRIM59-201ENST00000309784 PANK3Q9H999 370 aa15.18■□□□□ 0.02
TRIM59-201ENST00000309784 RIMS2Q9UQ26 1411 aa15.18■□□□□ 0.02
TRIM59-201ENST00000309784 SRPK2P78362 688 aaKnown RBP15.17■□□□□ 0.02
TRIM59-201ENST00000309784 MINK1Q8N4C8 1332 aaPredicted RBP15.17■□□□□ 0.02
TRIM59-201ENST00000309784 SLC24A1O60721 1099 aa15.17■□□□□ 0.02
TRIM59-201ENST00000309784 KNSTRNQ9Y448 316 aa15.17■□□□□ 0.02
TRIM59-201ENST00000309784 PRKRIP1Q9H875 184 aaPredicted RBP15.17■□□□□ 0.02
TRIM59-201ENST00000309784 CCER2I3L3R5 266 aa15.15■□□□□ 0.02
TRIM59-201ENST00000309784 THEMISQ8N1K5 641 aaPredicted RBP15.15■□□□□ 0.02
TRIM59-201ENST00000309784 PRAM1Q96QH2 718 aa15.15■□□□□ 0.02
TRIM59-201ENST00000309784 SLC26A8Q96RN1 970 aa15.15■□□□□ 0.02
TRIM59-201ENST00000309784 PIK3C2GO75747 1445 aa15.14■□□□□ 0.01
TRIM59-201ENST00000309784 PIK3C2BO00750 1634 aa15.13■□□□□ 0.01
TRIM59-201ENST00000309784 A2ML1A8K2U0 1454 aa15.12■□□□□ 0.01
TRIM59-201ENST00000309784 CABP2Q9NPB3 220 aa15.11■□□□□ 0.01
TRIM59-201ENST00000309784 EVC2Q86UK5 1308 aa15.11■□□□□ 0.01
TRIM59-201ENST00000309784 NEXMIFQ5QGS0 1516 aa15.1■□□□□ 0.01
TRIM59-201ENST00000309784 SPATA31D1Q6ZQQ2 1576 aa15.1■□□□□ 0.01
TRIM59-201ENST00000309784 HNRNPUQ00839 825 aaKnown RBP eCLIP15.1■□□□□ 0.01
TRIM59-201ENST00000309784 WAPLQ7Z5K2 1190 aa15.1■□□□□ 0.01
TRIM59-201ENST00000309784 MYO5BQ9ULV0 1848 aa15.09■□□□□ 0.01
TRIM59-201ENST00000309784 KTN1Q86UP2 1357 aaKnown RBP15.09■□□□□ 0.01
TRIM59-201ENST00000309784 SENP3-EIF4A1A0A087X0R7 540 aa15.09■□□□□ 0.01
TRIM59-201ENST00000309784 NEURL4Q96JN8 1562 aa15.08■□□□□ 0.01
TRIM59-201ENST00000309784 PPLO60437 1756 aa15.08■□□□□ 0.01
TRIM59-201ENST00000309784 TMEM131LA2VDJ0 1609 aa15.08■□□□□ 0
TRIM59-201ENST00000309784 TMEM2Q9UHN6 1383 aa15.08■□□□□ 0
TRIM59-201ENST00000309784 LTKP29376 864 aa15.08■□□□□ 0
TRIM59-201ENST00000309784 NUTM2FA1L443 756 aa15.07■□□□□ 0
TRIM59-201ENST00000309784 CCDC184Q52MB2 194 aa15.07■□□□□ 0
TRIM59-201ENST00000309784 SLC12A5Q9H2X9 1139 aa15.06■□□□□ 0
TRIM59-201ENST00000309784 FER1L4A9Z1Z3 1794 aa15.06■□□□□ 0
TRIM59-201ENST00000309784 TNNT2P45379 298 aaPredicted RBP15.06■□□□□ 0
TRIM59-201ENST00000309784 NRXN1Q9ULB1 1477 aa15.05■□□□□ 0
TRIM59-201ENST00000309784 YTHDC2Q9H6S0 1430 aaKnown RBP15.05■□□□□ -0
TRIM59-201ENST00000309784 ZFYVE9O95405 1425 aa15.04■□□□□ -0
TRIM59-201ENST00000309784 RALBP1Q15311 655 aa15.04■□□□□ -0
TRIM59-201ENST00000309784 LAMC1P11047 1609 aa15.04■□□□□ -0
TRIM59-201ENST00000309784 NLRP1Q9C000 1473 aa15.03■□□□□ -0
TRIM59-201ENST00000309784 ANKLE2Q86XL3 938 aa15.03■□□□□ -0
TRIM59-201ENST00000309784 IFT172Q9UG01 1749 aa15.02■□□□□ -0
TRIM59-201ENST00000309784 RIMS1Q86UR5 1692 aaKnown RBP15.02□□□□□ -0.01
TRIM59-201ENST00000309784 C14orf37Q86TY3 774 aa15.02□□□□□ -0.01
TRIM59-201ENST00000309784 CDK19Q9BWU1 502 aa15.01□□□□□ -0.01
TRIM59-201ENST00000309784 KIAA1210Q9ULL0 1709 aa15.01□□□□□ -0.01
TRIM59-201ENST00000309784 METP08581 1390 aa15□□□□□ -0.01
TRIM59-201ENST00000309784 IQGAP1P46940 1657 aa15□□□□□ -0.01
TRIM59-201ENST00000309784 MYBBP1AQ9BQG0 1328 aaKnown RBP15□□□□□ -0.01
TRIM59-201ENST00000309784 SALL2Q9Y467 1007 aaPredicted RBP14.99□□□□□ -0.01
TRIM59-201ENST00000309784 ALKQ9UM73 1620 aa14.99□□□□□ -0.01
TRIM59-201ENST00000309784 AMOTL2Q9Y2J4 779 aa14.99□□□□□ -0.01
TRIM59-201ENST00000309784 SETBP1Q9Y6X0 1596 aa14.99□□□□□ -0.01
TRIM59-201ENST00000309784 C3P01024 1663 aa14.98□□□□□ -0.01
TRIM59-201ENST00000309784 ADGRB1O14514 1584 aa14.98□□□□□ -0.01
TRIM59-201ENST00000309784 POLR1AO95602 1720 aaPredicted RBP14.98□□□□□ -0.01
TRIM59-201ENST00000309784 HDGFL2Q7Z4V5 671 aaPredicted RBP14.98□□□□□ -0.01
TRIM59-201ENST00000309784 MORC1Q86VD1 984 aa14.98□□□□□ -0.01
TRIM59-201ENST00000309784 NLRP13Q86W25 1043 aa14.98□□□□□ -0.01
TRIM59-201ENST00000309784 PER1O15534 1290 aaPredicted RBP14.97□□□□□ -0.01
TRIM59-201ENST00000309784 LRPPRCP42704 1394 aaKnown RBP14.97□□□□□ -0.01
TRIM59-201ENST00000309784 TERF2IPQ9NYB0 399 aa14.97□□□□□ -0.01
TRIM59-201ENST00000309784 PLEKHH1Q9ULM0 1364 aa14.97□□□□□ -0.01
TRIM59-201ENST00000309784 CABP1Q9NZU7 370 aa14.96□□□□□ -0.01
TRIM59-201ENST00000309784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.95□□□□□ -0.02
TRIM59-201ENST00000309784 RBM33Q96EV2 1170 aaKnown RBP14.95□□□□□ -0.02
TRIM59-201ENST00000309784 SBNO2Q9Y2G9 1366 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms