RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 FANCIQ9NVI1 1328 aa12.28□□□□□ -0.44
TMOD3-201ENST00000308580 TOP2BQ02880 1626 aa12.28□□□□□ -0.44
TMOD3-201ENST00000308580 CCDC9Q9Y3X0 531 aaKnown RBP12.28□□□□□ -0.44
TMOD3-201ENST00000308580 HMOX1P09601 288 aa12.28□□□□□ -0.44
TMOD3-201ENST00000308580 HFM1A2PYH4 1435 aa12.28□□□□□ -0.44
TMOD3-201ENST00000308580 TOPBP1Q92547 1522 aa12.28□□□□□ -0.44
TMOD3-201ENST00000308580 HSP90B1P14625 803 aaKnown RBP12.28□□□□□ -0.44
TMOD3-201ENST00000308580 EIF2S2P20042 333 aaKnown RBP12.27□□□□□ -0.44
TMOD3-201ENST00000308580 HTATSF1O43719 755 aaKnown RBP12.27□□□□□ -0.45
TMOD3-201ENST00000308580 MTHFSP49914 203 aa12.27□□□□□ -0.45
TMOD3-201ENST00000308580 API5Q9BZZ5 524 aaKnown RBP12.27□□□□□ -0.45
TMOD3-201ENST00000308580 PANK1Q8TE04 598 aa12.27□□□□□ -0.45
TMOD3-201ENST00000308580 NECTIN2Q92692 538 aa12.27□□□□□ -0.45
TMOD3-201ENST00000308580 SYNJ2O15056 1496 aa12.27□□□□□ -0.45
TMOD3-201ENST00000308580 C1orf141Q5JVX7 400 aa12.27□□□□□ -0.45
TMOD3-201ENST00000308580 USP35Q9P2H5 1018 aa12.26□□□□□ -0.45
TMOD3-201ENST00000308580 ARHGAP5Q13017 1502 aa12.26□□□□□ -0.45
TMOD3-201ENST00000308580 KIAA2012Q0VF49 1180 aa12.26□□□□□ -0.45
TMOD3-201ENST00000308580 EFCAB5A4FU69 1503 aa12.26□□□□□ -0.45
TMOD3-201ENST00000308580 PPP2R1AP30153 589 aa12.26□□□□□ -0.45
TMOD3-201ENST00000308580 TCP11L2Q8N4U5 519 aa12.25□□□□□ -0.45
TMOD3-201ENST00000308580 KIAA1107Q9UPP5 1409 aa12.25□□□□□ -0.45
TMOD3-201ENST00000308580 C9orf84Q5VXU9 1444 aa12.25□□□□□ -0.45
TMOD3-201ENST00000308580 TROQ12816 1431 aaPredicted RBP12.24□□□□□ -0.45
TMOD3-201ENST00000308580 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.24□□□□□ -0.45
TMOD3-201ENST00000308580 GNAI1P63096 354 aa12.24□□□□□ -0.45
TMOD3-201ENST00000308580 TIAM1Q13009 1591 aa12.23□□□□□ -0.45
TMOD3-201ENST00000308580 KIF16BQ96L93 1317 aa12.23□□□□□ -0.45
TMOD3-201ENST00000308580 FKBP5Q13451 457 aaPredicted RBP12.23□□□□□ -0.45
TMOD3-201ENST00000308580 LNPKQ9C0E8 428 aa12.23□□□□□ -0.45
TMOD3-201ENST00000308580 EHBP1L1Q8N3D4 1523 aa12.23□□□□□ -0.45
TMOD3-201ENST00000308580 DDX11L8A8MPP1 907 aa12.22□□□□□ -0.45
TMOD3-201ENST00000308580 CCDC184Q52MB2 194 aa12.22□□□□□ -0.45
TMOD3-201ENST00000308580 C9orf78Q9NZ63 289 aaPredicted RBP12.22□□□□□ -0.45
TMOD3-201ENST00000308580 HMGXB3Q12766 1538 aa12.22□□□□□ -0.45
TMOD3-201ENST00000308580 DDX49Q9Y6V7 483 aaKnown RBP12.22□□□□□ -0.45
TMOD3-201ENST00000308580 SLC12A5Q9H2X9 1139 aa12.22□□□□□ -0.45
TMOD3-201ENST00000308580 FOXD4L6Q3SYB3 417 aaPredicted RBP12.22□□□□□ -0.45
TMOD3-201ENST00000308580 FOXD4L3Q6VB84 417 aaPredicted RBP12.22□□□□□ -0.45
TMOD3-201ENST00000308580 MRC2Q9UBG0 1479 aa12.21□□□□□ -0.45
TMOD3-201ENST00000308580 PSME1Q06323 249 aa12.21□□□□□ -0.45
TMOD3-201ENST00000308580 TOMM22Q9NS69 142 aa12.21□□□□□ -0.45
TMOD3-201ENST00000308580 PNISRQ8TF01 805 aaKnown RBP12.21□□□□□ -0.45
TMOD3-201ENST00000308580 NEXNQ0ZGT2 675 aa12.2□□□□□ -0.46
TMOD3-201ENST00000308580 GSE1Q14687 1217 aa12.2□□□□□ -0.46
TMOD3-201ENST00000308580 IFT140Q96RY7 1462 aa12.2□□□□□ -0.46
TMOD3-201ENST00000308580 DIAPH3Q9NSV4 1193 aa12.2□□□□□ -0.46
TMOD3-201ENST00000308580 TSPYL4Q9UJ04 414 aa12.2□□□□□ -0.46
TMOD3-201ENST00000308580 REC8O95072 547 aa12.2□□□□□ -0.46
TMOD3-201ENST00000308580 CSPP1Q1MSJ5 1256 aa12.2□□□□□ -0.46
TMOD3-201ENST00000308580 GTF2E1P29083 439 aaPredicted RBP12.2□□□□□ -0.46
TMOD3-201ENST00000308580 TTC5Q8N0Z6 440 aa12.2□□□□□ -0.46
TMOD3-201ENST00000308580 NUTM2GQ5VZR2 741 aa12.19□□□□□ -0.46
TMOD3-201ENST00000308580 DAPK1P53355 1430 aa12.19□□□□□ -0.46
TMOD3-201ENST00000308580 NAIPQ13075 1403 aa12.19□□□□□ -0.46
TMOD3-201ENST00000308580 SCAPERQ9BY12 1400 aa12.19□□□□□ -0.46
TMOD3-201ENST00000308580 PRAM1Q96QH2 718 aa12.18□□□□□ -0.46
TMOD3-201ENST00000308580 FRAT2O75474 233 aaPredicted RBP12.17□□□□□ -0.46
TMOD3-201ENST00000308580 NLRP6P59044 892 aa12.17□□□□□ -0.46
TMOD3-201ENST00000308580 KIF3AQ9Y496 699 aa12.17□□□□□ -0.46
TMOD3-201ENST00000308580 SNAPC4Q5SXM2 1469 aa12.17□□□□□ -0.46
TMOD3-201ENST00000308580 PRKAR2BP31323 418 aa12.17□□□□□ -0.46
TMOD3-201ENST00000308580 ANO2Q9NQ90 1003 aa12.17□□□□□ -0.46
TMOD3-201ENST00000308580 EXOSC9Q06265 439 aaKnown RBP12.17□□□□□ -0.46
TMOD3-201ENST00000308580 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.17□□□□□ -0.463e-7■■□□□ 11.7
TMOD3-201ENST00000308580 WDR97A6NE52 1622 aa12.17□□□□□ -0.46
TMOD3-201ENST00000308580 ROCK1Q13464 1354 aa12.16□□□□□ -0.46
TMOD3-201ENST00000308580 AKNAQ7Z591 1439 aa12.16□□□□□ -0.46
TMOD3-201ENST00000308580 CC2D2AQ9P2K1 1620 aa12.16□□□□□ -0.46
TMOD3-201ENST00000308580 AAMPQ13685 434 aa12.16□□□□□ -0.46
TMOD3-201ENST00000308580 EVA1CP58658 441 aa12.16□□□□□ -0.46
TMOD3-201ENST00000308580 ARID3AQ99856 593 aa12.16□□□□□ -0.46
TMOD3-201ENST00000308580 SF3A1Q15459 793 aaKnown RBP12.16□□□□□ -0.46
TMOD3-201ENST00000308580 CHMP5Q9NZZ3 219 aa12.16□□□□□ -0.46
TMOD3-201ENST00000308580 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.16□□□□□ -0.46
TMOD3-201ENST00000308580 IFIT2P09913 472 aaKnown RBP12.16□□□□□ -0.46
TMOD3-201ENST00000308580 C22orf23Q9BZE7 217 aa12.16□□□□□ -0.46
TMOD3-201ENST00000308580 PHF14O94880 888 aa12.15□□□□□ -0.46
TMOD3-201ENST00000308580 CDK13Q14004 1512 aaKnown RBP12.15□□□□□ -0.46
TMOD3-201ENST00000308580 RUFY2Q8WXA3 655 aa12.15□□□□□ -0.46
TMOD3-201ENST00000308580 BCAR3O75815 825 aa12.15□□□□□ -0.47
TMOD3-201ENST00000308580 SKOR2Q2VWA4 1001 aaPredicted RBP12.14□□□□□ -0.47
TMOD3-201ENST00000308580 CCDC34Q96HJ3 373 aa12.14□□□□□ -0.47
TMOD3-201ENST00000308580 H3BQV1 296 aa12.14□□□□□ -0.47
TMOD3-201ENST00000308580 DDX58O95786 925 aaKnown RBP12.14□□□□□ -0.47
TMOD3-201ENST00000308580 ZKSCAN1P17029 563 aaPredicted RBP12.14□□□□□ -0.47
TMOD3-201ENST00000308580 TPM4P67936 248 aa12.14□□□□□ -0.47
TMOD3-201ENST00000308580 IFFO2Q5TF58 517 aa12.14□□□□□ -0.47
TMOD3-201ENST00000308580 EPRSP07814 1512 aaKnown RBP12.14□□□□□ -0.47
TMOD3-201ENST00000308580 FAM184AQ8NB25 1140 aa12.14□□□□□ -0.47
TMOD3-201ENST00000308580 TSR2Q969E8 191 aaKnown RBP12.14□□□□□ -0.47
TMOD3-201ENST00000308580 ATP6V1DQ9Y5K8 247 aa12.14□□□□□ -0.47
TMOD3-201ENST00000308580 DNMBPQ6XZF7 1577 aa12.13□□□□□ -0.47
TMOD3-201ENST00000308580 TXNDC2Q86VQ3 553 aa12.13□□□□□ -0.47
TMOD3-201ENST00000308580 PLEKHH2Q8IVE3 1493 aa12.13□□□□□ -0.47
TMOD3-201ENST00000308580 HECW1Q76N89 1606 aa12.13□□□□□ -0.47
TMOD3-201ENST00000308580 CLSTN1O94985 981 aa12.13□□□□□ -0.47
TMOD3-201ENST00000308580 G3BP1Q13283 466 aaKnown RBP eCLIP12.13□□□□□ -0.47
TMOD3-201ENST00000308580 RAPGEF3O95398 923 aa12.13□□□□□ -0.47
TMOD3-201ENST00000308580 INTS3Q68E01 1043 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 163.1 ms