RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 CCDC27Q2M243 656 aa20.57■□□□□ 0.88
PDS5A-201ENST00000303538 GOLGA6L3A6NEY3 463 aa20.57■□□□□ 0.88
PDS5A-201ENST00000303538 GOLGA6L19H0YKK7 550 aa20.56■□□□□ 0.88
PDS5A-201ENST00000303538 NACADO15069 1562 aa20.56■□□□□ 0.88
PDS5A-201ENST00000303538 CPLX2Q6PUV4 134 aaKnown RBP20.55■□□□□ 0.88
PDS5A-201ENST00000303538 LRRFIP1Q32MZ4 808 aaKnown RBP20.55■□□□□ 0.88
PDS5A-201ENST00000303538 RBM19Q9Y4C8 960 aaKnown RBP20.55■□□□□ 0.88
PDS5A-201ENST00000303538 BECN2A8MW95 431 aa20.55■□□□□ 0.88
PDS5A-201ENST00000303538 AIMP1Q12904 312 aaKnown RBP20.55■□□□□ 0.88
PDS5A-201ENST00000303538 IFIT2P09913 472 aaKnown RBP20.55■□□□□ 0.88
PDS5A-201ENST00000303538 L3MBTL2Q969R5 705 aa20.55■□□□□ 0.88
PDS5A-201ENST00000303538 PANK3Q9H999 370 aa20.55■□□□□ 0.88
PDS5A-201ENST00000303538 CPLX1O14810 134 aa20.54■□□□□ 0.88
PDS5A-201ENST00000303538 CCAR1Q8IX12 1150 aaKnown RBP20.54■□□□□ 0.88
PDS5A-201ENST00000303538 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.54■□□□□ 0.883e-7■■■■■ 232.3
PDS5A-201ENST00000303538 PHF14O94880 888 aa20.54■□□□□ 0.88
PDS5A-201ENST00000303538 TPM1P09493 284 aa20.54■□□□□ 0.88
PDS5A-201ENST00000303538 IKQ13123 557 aaPredicted RBP20.54■□□□□ 0.88
PDS5A-201ENST00000303538 KDM4AO75164 1064 aa20.53■□□□□ 0.88
PDS5A-201ENST00000303538 ANO2Q9NQ90 1003 aa20.53■□□□□ 0.88
PDS5A-201ENST00000303538 TRDNQ13061 729 aa20.52■□□□□ 0.88
PDS5A-201ENST00000303538 ERICH2A1L162 156 aa20.51■□□□□ 0.87
PDS5A-201ENST00000303538 IBSPP21815 317 aaPredicted RBP20.51■□□□□ 0.87
PDS5A-201ENST00000303538 JPH4Q96JJ6 628 aa20.51■□□□□ 0.87
PDS5A-201ENST00000303538 EVC2Q86UK5 1308 aa20.51■□□□□ 0.87
PDS5A-201ENST00000303538 VGFO15240 615 aaPredicted RBP20.5■□□□□ 0.87
PDS5A-201ENST00000303538 NLRP2Q9NX02 1062 aa20.5■□□□□ 0.87
PDS5A-201ENST00000303538 DDX58O95786 925 aaKnown RBP20.5■□□□□ 0.87
PDS5A-201ENST00000303538 R3HCC1Q9Y3T6 440 aaKnown RBP20.5■□□□□ 0.87
PDS5A-201ENST00000303538 NEUROD6Q96NK8 337 aa20.5■□□□□ 0.87
PDS5A-201ENST00000303538 TIMELESSQ9UNS1 1208 aa20.5■□□□□ 0.87
PDS5A-201ENST00000303538 RAPGEF4Q8WZA2 1011 aa20.49■□□□□ 0.87
PDS5A-201ENST00000303538 CCDC47Q96A33 483 aaKnown RBP20.49■□□□□ 0.87
PDS5A-201ENST00000303538 RAB3GAP2Q9H2M9 1393 aa20.49■□□□□ 0.87
PDS5A-201ENST00000303538 NLRP13Q86W25 1043 aa20.49■□□□□ 0.87
PDS5A-201ENST00000303538 CGNL1Q0VF96 1302 aa20.49■□□□□ 0.87
PDS5A-201ENST00000303538 FKBP5Q13451 457 aaPredicted RBP20.48■□□□□ 0.87
PDS5A-201ENST00000303538 G3BP1Q13283 466 aaKnown RBP eCLIP20.48■□□□□ 0.87
PDS5A-201ENST00000303538 ST20-MTHFSA0A0A6YYL1 179 aa20.47■□□□□ 0.87
PDS5A-201ENST00000303538 PAXIP1Q6ZW49 1069 aaPredicted RBP20.47■□□□□ 0.87
PDS5A-201ENST00000303538 RIC3Q7Z5B4 369 aa20.46■□□□□ 0.87
PDS5A-201ENST00000303538 ZNF592Q92610 1267 aa20.46■□□□□ 0.87
PDS5A-201ENST00000303538 TMEM132AQ24JP5 1023 aa20.46■□□□□ 0.87
PDS5A-201ENST00000303538 PAF1Q8N7H5 531 aa20.46■□□□□ 0.87
PDS5A-201ENST00000303538 CT47A1Q5JQC4 288 aaPredicted RBP20.45■□□□□ 0.86
PDS5A-201ENST00000303538 ZFYVE27Q5T4F4 411 aa20.45■□□□□ 0.86
PDS5A-201ENST00000303538 RUFY2Q8WXA3 655 aa20.45■□□□□ 0.86
PDS5A-201ENST00000303538 PRDM2Q13029 1718 aa20.45■□□□□ 0.86
PDS5A-201ENST00000303538 ZKSCAN1P17029 563 aaPredicted RBP20.44■□□□□ 0.86
PDS5A-201ENST00000303538 ODF2Q5BJF6 829 aa20.44■□□□□ 0.86
PDS5A-201ENST00000303538 RBM42Q9BTD8 480 aaKnown RBP20.44■□□□□ 0.86
PDS5A-201ENST00000303538 WASHC4Q2M389 1173 aa20.44■□□□□ 0.86
PDS5A-201ENST00000303538 HMOX1P09601 288 aa20.43■□□□□ 0.86
PDS5A-201ENST00000303538 NAP1L1P55209 391 aaKnown RBP20.43■□□□□ 0.86
PDS5A-201ENST00000303538 IPO7O95373 1038 aaKnown RBP20.43■□□□□ 0.86
PDS5A-201ENST00000303538 FMN1Q68DA7 1419 aa20.43■□□□□ 0.86
PDS5A-201ENST00000303538 ZKSCAN2Q63HK3 967 aa20.42■□□□□ 0.86
PDS5A-201ENST00000303538 COG6Q9Y2V7 657 aa20.42■□□□□ 0.86
PDS5A-201ENST00000303538 DDX49Q9Y6V7 483 aaKnown RBP20.42■□□□□ 0.86
PDS5A-201ENST00000303538 CCDC70Q6NSX1 233 aa20.42■□□□□ 0.86
PDS5A-201ENST00000303538 CHMP4CQ96CF2 233 aa20.42■□□□□ 0.86
PDS5A-201ENST00000303538 RIPK4P57078 832 aa20.41■□□□□ 0.86
PDS5A-201ENST00000303538 TSPYL4Q9UJ04 414 aa20.41■□□□□ 0.86
PDS5A-201ENST00000303538 ABCC8Q09428 1581 aa20.41■□□□□ 0.86
PDS5A-201ENST00000303538 DIAPH1O60610 1272 aaKnown RBP20.41■□□□□ 0.86
PDS5A-201ENST00000303538 ESCO1Q5FWF5 840 aa20.41■□□□□ 0.86
PDS5A-201ENST00000303538 RSPH4AQ5TD94 716 aa20.41■□□□□ 0.86
PDS5A-201ENST00000303538 ANKRD20A12PQ8NF67 263 aa20.41■□□□□ 0.86
PDS5A-201ENST00000303538 CCDC144AA2RUR9 1427 aa20.41■□□□□ 0.86
PDS5A-201ENST00000303538 BICD2Q8TD16 824 aa20.4■□□□□ 0.86
PDS5A-201ENST00000303538 ATP6V1DQ9Y5K8 247 aa20.4■□□□□ 0.86
PDS5A-201ENST00000303538 BAZ1AQ9NRL2 1556 aaPredicted RBP20.4■□□□□ 0.86
PDS5A-201ENST00000303538 FHOD3Q2V2M9 1422 aa20.38■□□□□ 0.85
PDS5A-201ENST00000303538 VPS37CA5D8V6 355 aaPredicted RBP20.37■□□□□ 0.85
PDS5A-201ENST00000303538 APAF1O14727 1248 aa20.36■□□□□ 0.85
PDS5A-201ENST00000303538 BCL11BQ9C0K0 894 aaPredicted RBP20.36■□□□□ 0.85
PDS5A-201ENST00000303538 ATP2B2Q01814 1243 aa20.36■□□□□ 0.85
PDS5A-201ENST00000303538 EPS15P42566 896 aa20.35■□□□□ 0.85
PDS5A-201ENST00000303538 RALYLQ86SE5 291 aaKnown RBP20.35■□□□□ 0.85
PDS5A-201ENST00000303538 CCDC18Q5T9S5 1454 aa20.35■□□□□ 0.85
PDS5A-201ENST00000303538 RNF20Q5VTR2 975 aa20.34■□□□□ 0.85
PDS5A-201ENST00000303538 SAFBQ15424 915 aaKnown RBP eCLIP20.34■□□□□ 0.85
PDS5A-201ENST00000303538 PROSER2Q86WR7 435 aaPredicted RBP20.34■□□□□ 0.85
PDS5A-201ENST00000303538 STK11IPQ8N1F8 1099 aa20.34■□□□□ 0.85
PDS5A-201ENST00000303538 HOOK1Q9UJC3 728 aaKnown RBP20.34■□□□□ 0.85
PDS5A-201ENST00000303538 KIF15Q9NS87 1388 aa20.34■□□□□ 0.85
PDS5A-201ENST00000303538 UACAQ9BZF9 1416 aa20.33■□□□□ 0.84
PDS5A-201ENST00000303538 RBM5P52756 815 aaKnown RBP eCLIP20.33■□□□□ 0.84
PDS5A-201ENST00000303538 WWC2Q6AWC2 1192 aa20.33■□□□□ 0.84
PDS5A-201ENST00000303538 HOMER1Q86YM7 354 aa20.33■□□□□ 0.84
PDS5A-201ENST00000303538 MYBBP1AQ9BQG0 1328 aaKnown RBP20.32■□□□□ 0.84
PDS5A-201ENST00000303538 NLRP6P59044 892 aa20.31■□□□□ 0.84
PDS5A-201ENST00000303538 CRBNQ96SW2 442 aa20.31■□□□□ 0.84
PDS5A-201ENST00000303538 E9PSI1 815 aa20.31■□□□□ 0.84
PDS5A-201ENST00000303538 DDX54Q8TDD1 881 aaKnown RBP20.31■□□□□ 0.84
PDS5A-201ENST00000303538 MYCNP04198 464 aaPredicted RBP20.31■□□□□ 0.84
PDS5A-201ENST00000303538 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.31■□□□□ 0.84
PDS5A-201ENST00000303538 IPO9Q96P70 1041 aaKnown RBP20.31■□□□□ 0.84
PDS5A-201ENST00000303538 VPS8Q8N3P4 1428 aa20.3■□□□□ 0.84
PDS5A-201ENST00000303538 DDX11L8A8MPP1 907 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms