RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 API5Q9BZZ5 524 aaKnown RBP17.1■□□□□ 0.33
PRKCB-201ENST00000303531 CNTLNQ9NXG0 1405 aa17.09■□□□□ 0.33
PRKCB-201ENST00000303531 NECTIN2Q92692 538 aa17.09■□□□□ 0.33
PRKCB-201ENST00000303531 C9orf78Q9NZ63 289 aaPredicted RBP17.09■□□□□ 0.33
PRKCB-201ENST00000303531 G3V3G9 751 aa17.09■□□□□ 0.33
PRKCB-201ENST00000303531 HSP90AA2PQ14568 343 aaPredicted RBP17.09■□□□□ 0.33
PRKCB-201ENST00000303531 DCAF8Q5TAQ9 597 aa17.09■□□□□ 0.33
PRKCB-201ENST00000303531 RSPH6AQ9H0K4 717 aa17.09■□□□□ 0.33
PRKCB-201ENST00000303531 BECN2A8MW95 431 aa17.09■□□□□ 0.33
PRKCB-201ENST00000303531 TNNT3P45378 269 aaPredicted RBP17.08■□□□□ 0.32
PRKCB-201ENST00000303531 MCTP1Q6DN14 999 aa17.08■□□□□ 0.32
PRKCB-201ENST00000303531 RUFY2Q8WXA3 655 aa17.08■□□□□ 0.32
PRKCB-201ENST00000303531 NEXNQ0ZGT2 675 aa17.08■□□□□ 0.32
PRKCB-201ENST00000303531 CHMP4CQ96CF2 233 aa17.07■□□□□ 0.32
PRKCB-201ENST00000303531 ZNF644Q9H582 1327 aaPredicted RBP17.07■□□□□ 0.32
PRKCB-201ENST00000303531 PES1O00541 588 aaKnown RBP17.07■□□□□ 0.32
PRKCB-201ENST00000303531 CHMP5Q9NZZ3 219 aa17.07■□□□□ 0.32
PRKCB-201ENST00000303531 MARCH6O60337 910 aa17.07■□□□□ 0.32
PRKCB-201ENST00000303531 CUX1P39880 1505 aa17.07■□□□□ 0.32
PRKCB-201ENST00000303531 IGF1RP08069 1367 aa17.07■□□□□ 0.32
PRKCB-201ENST00000303531 ZKSCAN1P17029 563 aaPredicted RBP17.06■□□□□ 0.32
PRKCB-201ENST00000303531 PDE4CQ08493 712 aa17.06■□□□□ 0.32
PRKCB-201ENST00000303531 TPD52L1Q16890 204 aaPredicted RBP17.06■□□□□ 0.32
PRKCB-201ENST00000303531 A0A0U1RQG5 324 aaPredicted RBP17.06■□□□□ 0.32
PRKCB-201ENST00000303531 ANO2Q9NQ90 1003 aa17.06■□□□□ 0.32
PRKCB-201ENST00000303531 FGD5Q6ZNL6 1462 aa17.05■□□□□ 0.32
PRKCB-201ENST00000303531 ROCK1Q13464 1354 aa17.05■□□□□ 0.32
PRKCB-201ENST00000303531 IFIT2P09913 472 aaKnown RBP17.05■□□□□ 0.32
PRKCB-201ENST00000303531 TTC5Q8N0Z6 440 aa17.05■□□□□ 0.32
PRKCB-201ENST00000303531 AKAP17AQ02040 695 aaKnown RBP17.04■□□□□ 0.32
PRKCB-201ENST00000303531 FKBP5Q13451 457 aaPredicted RBP17.04■□□□□ 0.32
PRKCB-201ENST00000303531 KIF21BO75037 1637 aa17.04■□□□□ 0.32
PRKCB-201ENST00000303531 VPS53Q5VIR6 699 aa17.04■□□□□ 0.32
PRKCB-201ENST00000303531 LNPKQ9C0E8 428 aa17.03■□□□□ 0.32
PRKCB-201ENST00000303531 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
PRKCB-201ENST00000303531 PANK1Q8TE04 598 aa17.03■□□□□ 0.32
PRKCB-201ENST00000303531 LRRFIP1Q32MZ4 808 aaKnown RBP17.02■□□□□ 0.32
PRKCB-201ENST00000303531 SYNE3Q6ZMZ3 975 aa17.02■□□□□ 0.32
PRKCB-201ENST00000303531 LRRC9Q6ZRR7 1453 aa17.02■□□□□ 0.32
PRKCB-201ENST00000303531 INTS3Q68E01 1043 aaKnown RBP17.02■□□□□ 0.31
PRKCB-201ENST00000303531 WASHC2AQ641Q2 1341 aa17.01■□□□□ 0.31
PRKCB-201ENST00000303531 GNAI1P63096 354 aa17.01■□□□□ 0.31
PRKCB-201ENST00000303531 HMOX1P09601 288 aa17.01■□□□□ 0.31
PRKCB-201ENST00000303531 CCAR2Q8N163 923 aaKnown RBP17.01■□□□□ 0.31
PRKCB-201ENST00000303531 C22orf23Q9BZE7 217 aa17.01■□□□□ 0.31
PRKCB-201ENST00000303531 TSR1Q2NL82 804 aaKnown RBP17.01■□□□□ 0.31
PRKCB-201ENST00000303531 CPLX2Q6PUV4 134 aaKnown RBP17■□□□□ 0.31
PRKCB-201ENST00000303531 RAD54L2Q9Y4B4 1467 aa17■□□□□ 0.31
PRKCB-201ENST00000303531 MIA2Q96PC5 1412 aa17■□□□□ 0.31
PRKCB-201ENST00000303531 EVA1CP58658 441 aa16.99■□□□□ 0.31
PRKCB-201ENST00000303531 TSPYL4Q9UJ04 414 aa16.99■□□□□ 0.31
PRKCB-201ENST00000303531 ZNF592Q92610 1267 aa16.99■□□□□ 0.31
PRKCB-201ENST00000303531 CEP89Q96ST8 783 aa16.99■□□□□ 0.31
PRKCB-201ENST00000303531 BRD4O60885 1362 aaPredicted RBP16.98■□□□□ 0.31
PRKCB-201ENST00000303531 DDX58O95786 925 aaKnown RBP16.98■□□□□ 0.31
PRKCB-201ENST00000303531 GGNBP2Q9H3C7 697 aa16.98■□□□□ 0.31
PRKCB-201ENST00000303531 ADAMTS8Q9UP79 889 aa16.98■□□□□ 0.31
PRKCB-201ENST00000303531 ANKRD50Q9ULJ7 1429 aa16.98■□□□□ 0.31
PRKCB-201ENST00000303531 G3BP1Q13283 466 aaKnown RBP eCLIP16.98■□□□□ 0.31
PRKCB-201ENST00000303531 TRIM29Q14134 588 aa16.98■□□□□ 0.31
PRKCB-201ENST00000303531 RNF20Q5VTR2 975 aa16.98■□□□□ 0.31
PRKCB-201ENST00000303531 TPM1P09493 284 aa16.98■□□□□ 0.31
PRKCB-201ENST00000303531 BICD2Q8TD16 824 aa16.98■□□□□ 0.31
PRKCB-201ENST00000303531 CPLX1O14810 134 aa16.98■□□□□ 0.31
PRKCB-201ENST00000303531 PRDM2Q13029 1718 aa16.97■□□□□ 0.31
PRKCB-201ENST00000303531 VPS37CA5D8V6 355 aaPredicted RBP16.97■□□□□ 0.31
PRKCB-201ENST00000303531 APPP05067 770 aa16.97■□□□□ 0.31
PRKCB-201ENST00000303531 NUCB2P80303 420 aa16.97■□□□□ 0.31
PRKCB-201ENST00000303531 SMC3Q9UQE7 1217 aa16.96■□□□□ 0.31
PRKCB-201ENST00000303531 AAMPQ13685 434 aa16.96■□□□□ 0.31
PRKCB-201ENST00000303531 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.96■□□□□ 0.31
PRKCB-201ENST00000303531 STAC3Q96MF2 364 aa16.96■□□□□ 0.31
PRKCB-201ENST00000303531 NCOA2Q15596 1464 aa16.96■□□□□ 0.31
PRKCB-201ENST00000303531 NFKBIBQ15653 356 aa16.95■□□□□ 0.3
PRKCB-201ENST00000303531 CABP2Q9NPB3 220 aa16.95■□□□□ 0.3
PRKCB-201ENST00000303531 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.95■□□□□ 0.3
PRKCB-201ENST00000303531 TPM2P07951 284 aa16.95■□□□□ 0.3
PRKCB-201ENST00000303531 PSME1Q06323 249 aa16.95■□□□□ 0.3
PRKCB-201ENST00000303531 FYCO1Q9BQS8 1478 aa16.94■□□□□ 0.3
PRKCB-201ENST00000303531 CDCA7LQ96GN5 454 aa16.94■□□□□ 0.3
PRKCB-201ENST00000303531 HSP90AB4PQ58FF6 505 aa16.93■□□□□ 0.3
PRKCB-201ENST00000303531 CDC45O75419 566 aa16.93■□□□□ 0.3
PRKCB-201ENST00000303531 TRDNQ13061 729 aa16.93■□□□□ 0.3
PRKCB-201ENST00000303531 ERC2O15083 957 aa16.92■□□□□ 0.3
PRKCB-201ENST00000303531 TMEM132EQ6IEE7 984 aa16.92■□□□□ 0.3
PRKCB-201ENST00000303531 CASKIN1Q8WXD9 1431 aa16.92■□□□□ 0.3
PRKCB-201ENST00000303531 MTHFSP49914 203 aa16.92■□□□□ 0.3
PRKCB-201ENST00000303531 CYB5RLQ6IPT4 315 aa16.91■□□□□ 0.3
PRKCB-201ENST00000303531 AMOTL1Q8IY63 956 aa16.91■□□□□ 0.3
PRKCB-201ENST00000303531 TCP11L2Q8N4U5 519 aa16.91■□□□□ 0.3
PRKCB-201ENST00000303531 FOSBP53539 338 aa16.9■□□□□ 0.3
PRKCB-201ENST00000303531 NOL10Q9BSC4 688 aaKnown RBP16.9■□□□□ 0.3
PRKCB-201ENST00000303531 NFXL1Q6ZNB6 911 aa16.9■□□□□ 0.3
PRKCB-201ENST00000303531 SASS6Q6UVJ0 657 aa16.9■□□□□ 0.3
PRKCB-201ENST00000303531 FBXW7Q969H0 707 aa16.89■□□□□ 0.29
PRKCB-201ENST00000303531 PCMTD1Q96MG8 357 aaPredicted RBP16.89■□□□□ 0.29
PRKCB-201ENST00000303531 PPP2R1AP30153 589 aa16.89■□□□□ 0.29
PRKCB-201ENST00000303531 FAM13BQ9NYF5 915 aa16.89■□□□□ 0.29
PRKCB-201ENST00000303531 HOMER1Q86YM7 354 aa16.89■□□□□ 0.29
PRKCB-201ENST00000303531 GPS2Q13227 327 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms