RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 MS4A1P11836 297 aa17.74■□□□□ 0.43
CTTN-201ENST00000301843 TNNT2P45379 298 aaPredicted RBP17.74■□□□□ 0.43
CTTN-201ENST00000301843 APAF1O14727 1248 aa17.74■□□□□ 0.43
CTTN-201ENST00000301843 DMRT2Q9Y5R5 561 aa17.74■□□□□ 0.43
CTTN-201ENST00000301843 NEUROD2Q15784 382 aa17.73■□□□□ 0.43
CTTN-201ENST00000301843 BLMP54132 1417 aaPredicted RBP17.72■□□□□ 0.43
CTTN-201ENST00000301843 GOLGA2Q08379 1002 aa17.71■□□□□ 0.43
CTTN-201ENST00000301843 ARAP3Q8WWN8 1544 aa17.71■□□□□ 0.43
CTTN-201ENST00000301843 AFAP1Q8N556 730 aa17.71■□□□□ 0.43
CTTN-201ENST00000301843 DAXXQ9UER7 740 aaPredicted RBP17.71■□□□□ 0.43
CTTN-201ENST00000301843 AMER1Q5JTC6 1135 aaPredicted RBP17.71■□□□□ 0.42
CTTN-201ENST00000301843 RTEL1-TNFRSF6BF6WH68 1400 aa17.7■□□□□ 0.42
CTTN-201ENST00000301843 BRPF3Q9ULD4 1205 aa17.7■□□□□ 0.42
CTTN-201ENST00000301843 RNF17Q9BXT8 1623 aaKnown RBP17.7■□□□□ 0.42
CTTN-201ENST00000301843 SPAG9O60271 1321 aaKnown RBP17.69■□□□□ 0.42
CTTN-201ENST00000301843 ZFYVE16Q7Z3T8 1539 aa17.69■□□□□ 0.42
CTTN-201ENST00000301843 KDM2BQ8NHM5 1336 aa17.68■□□□□ 0.42
CTTN-201ENST00000301843 NFKBIBQ15653 356 aa17.68■□□□□ 0.42
CTTN-201ENST00000301843 RRP7AQ9Y3A4 280 aaKnown RBP17.67■□□□□ 0.42
CTTN-201ENST00000301843 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.67■□□□□ 0.42
CTTN-201ENST00000301843 ZMYM4Q5VZL5 1548 aa17.66■□□□□ 0.42
CTTN-201ENST00000301843 C8orf34Q49A92 452 aa17.66■□□□□ 0.42
CTTN-201ENST00000301843 WASHC2CQ9Y4E1 1318 aa17.66■□□□□ 0.42
CTTN-201ENST00000301843 TRPM2O94759 1503 aa17.65■□□□□ 0.42
CTTN-201ENST00000301843 WDR7Q9Y4E6 1490 aa17.65■□□□□ 0.42
CTTN-201ENST00000301843 PPM1GO15355 546 aaPredicted RBP17.65■□□□□ 0.42
CTTN-201ENST00000301843 CFAP70Q5T0N1 1121 aa17.65■□□□□ 0.42
CTTN-201ENST00000301843 DEPDC5O75140 1603 aa17.65■□□□□ 0.42
CTTN-201ENST00000301843 MADDQ8WXG6 1647 aa17.65■□□□□ 0.42
CTTN-201ENST00000301843 CENPQQ7L2Z9 268 aaPredicted RBP17.64■□□□□ 0.42
CTTN-201ENST00000301843 FRAT1Q92837 279 aaPredicted RBP17.64■□□□□ 0.41
CTTN-201ENST00000301843 PANK1Q8TE04 598 aa17.64■□□□□ 0.41
CTTN-201ENST00000301843 IGHDP01880 384 aa17.63■□□□□ 0.41
CTTN-201ENST00000301843 SLFN5Q08AF3 891 aa17.63■□□□□ 0.41
CTTN-201ENST00000301843 BCL2L13Q9BXK5 485 aa17.63■□□□□ 0.41
CTTN-201ENST00000301843 PTPRTO14522 1441 aa17.63■□□□□ 0.41
CTTN-201ENST00000301843 CEP152O94986 1710 aa17.63■□□□□ 0.41
CTTN-201ENST00000301843 SPHKAPQ2M3C7 1700 aa17.63■□□□□ 0.41
CTTN-201ENST00000301843 FAM161AQ3B820 660 aa17.62■□□□□ 0.41
CTTN-201ENST00000301843 DDRGK1Q96HY6 314 aa17.62■□□□□ 0.41
CTTN-201ENST00000301843 ABCA9Q8IUA7 1624 aa17.62■□□□□ 0.41
CTTN-201ENST00000301843 FRAT2O75474 233 aaPredicted RBP17.62■□□□□ 0.41
CTTN-201ENST00000301843 COG6Q9Y2V7 657 aa17.62■□□□□ 0.41
CTTN-201ENST00000301843 CHGAP10645 457 aaKnown RBP17.62■□□□□ 0.41
CTTN-201ENST00000301843 CANXP27824 592 aaKnown RBP17.62■□□□□ 0.41
CTTN-201ENST00000301843 TNNQ9UQP3 1299 aa17.61■□□□□ 0.41
CTTN-201ENST00000301843 INO80Q9ULG1 1556 aaPredicted RBP17.61■□□□□ 0.41
CTTN-201ENST00000301843 IQGAP1P46940 1657 aa17.61■□□□□ 0.41
CTTN-201ENST00000301843 TET3O43151 1660 aa17.61■□□□□ 0.41
CTTN-201ENST00000301843 CLTCL1P53675 1640 aa17.6■□□□□ 0.41
CTTN-201ENST00000301843 ATP7AQ04656 1500 aa17.6■□□□□ 0.41
CTTN-201ENST00000301843 FANCAO15360 1455 aa17.6■□□□□ 0.41
CTTN-201ENST00000301843 ZNF521Q96K83 1311 aa17.6■□□□□ 0.41
CTTN-201ENST00000301843 SEC24BO95487 1268 aa17.6■□□□□ 0.41
CTTN-201ENST00000301843 CARD14Q9BXL6 1004 aa17.59■□□□□ 0.41
CTTN-201ENST00000301843 VWDEQ8N2E2 1590 aa17.59■□□□□ 0.41
CTTN-201ENST00000301843 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.59■□□□□ 0.41
CTTN-201ENST00000301843 STAC3Q96MF2 364 aa17.57■□□□□ 0.4
CTTN-201ENST00000301843 KIF3BO15066 747 aa17.57■□□□□ 0.4
CTTN-201ENST00000301843 GSE1Q14687 1217 aa17.57■□□□□ 0.4
CTTN-201ENST00000301843 CLUAP1Q96AJ1 413 aa17.57■□□□□ 0.4
CTTN-201ENST00000301843 INSRP06213 1382 aa17.57■□□□□ 0.4
CTTN-201ENST00000301843 ARXQ96QS3 562 aa17.57■□□□□ 0.4
CTTN-201ENST00000301843 SCAPERQ9BY12 1400 aa17.56■□□□□ 0.4
CTTN-201ENST00000301843 USP35Q9P2H5 1018 aa17.56■□□□□ 0.4
CTTN-201ENST00000301843 ADGRF5Q8IZF2 1346 aa17.56■□□□□ 0.4
CTTN-201ENST00000301843 KANK1Q14678 1352 aa17.56■□□□□ 0.4
CTTN-201ENST00000301843 NUTM2DQ5VT03 806 aaPredicted RBP17.55■□□□□ 0.4
CTTN-201ENST00000301843 SLKQ9H2G2 1235 aaPredicted RBP17.55■□□□□ 0.4
CTTN-201ENST00000301843 SCAF11Q99590 1463 aaKnown RBP17.55■□□□□ 0.4
CTTN-201ENST00000301843 ADGRL1O94910 1474 aa17.54■□□□□ 0.4
CTTN-201ENST00000301843 SPRYD3Q8NCJ5 442 aa17.53■□□□□ 0.4
CTTN-201ENST00000301843 TRAK1Q9UPV9 953 aa17.53■□□□□ 0.4
CTTN-201ENST00000301843 MROH1Q8NDA8 1641 aa17.52■□□□□ 0.4
CTTN-201ENST00000301843 NEURL4Q96JN8 1562 aa17.52■□□□□ 0.4
CTTN-201ENST00000301843 UGGT1Q9NYU2 1555 aa17.52■□□□□ 0.4
CTTN-201ENST00000301843 CDCA8Q53HL2 280 aa17.52■□□□□ 0.39
CTTN-201ENST00000301843 ASXL1Q8IXJ9 1541 aa17.51■□□□□ 0.39
CTTN-201ENST00000301843 KIAA1210Q9ULL0 1709 aa17.5■□□□□ 0.39
CTTN-201ENST00000301843 SYNMO15061 1565 aa17.5■□□□□ 0.39
CTTN-201ENST00000301843 TMEM132EQ6IEE7 984 aa17.5■□□□□ 0.39
CTTN-201ENST00000301843 SLC12A5Q9H2X9 1139 aa17.5■□□□□ 0.39
CTTN-201ENST00000301843 ASXL2Q76L83 1435 aa17.5■□□□□ 0.39
CTTN-201ENST00000301843 CENPJQ9HC77 1338 aaPredicted RBP17.49■□□□□ 0.39
CTTN-201ENST00000301843 SAFB2Q14151 953 aaKnown RBP eCLIP17.49■□□□□ 0.393e-7■■□□□ 13.3
CTTN-201ENST00000301843 WWC1Q8IX03 1113 aa17.49■□□□□ 0.39
CTTN-201ENST00000301843 RLBP1P12271 317 aa17.48■□□□□ 0.39
CTTN-201ENST00000301843 NKTRP30414 1462 aaKnown RBP17.48■□□□□ 0.39
CTTN-201ENST00000301843 E9PSI1 815 aa17.48■□□□□ 0.39
CTTN-201ENST00000301843 TRMT2AQ8IZ69 625 aaKnown RBP17.48■□□□□ 0.39
CTTN-201ENST00000301843 EIF3AQ14152 1382 aaKnown RBP17.47■□□□□ 0.39
CTTN-201ENST00000301843 KIDINS220Q9ULH0 1771 aa17.46■□□□□ 0.39
CTTN-201ENST00000301843 MYOM1P52179 1685 aa17.46■□□□□ 0.39
CTTN-201ENST00000301843 MORC1Q86VD1 984 aa17.46■□□□□ 0.39
CTTN-201ENST00000301843 MAP3K4Q9Y6R4 1608 aa17.46■□□□□ 0.39
CTTN-201ENST00000301843 EFCAB6Q5THR3 1501 aa17.46■□□□□ 0.38
CTTN-201ENST00000301843 MYOM2P54296 1465 aa17.46■□□□□ 0.38
CTTN-201ENST00000301843 USP19O94966 1318 aa17.45■□□□□ 0.38
CTTN-201ENST00000301843 PCDHB15Q9Y5E8 787 aa17.45■□□□□ 0.38
CTTN-201ENST00000301843 TCP11L2Q8N4U5 519 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms