RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 BCAR3O75815 825 aa14.04□□□□□ -0.16
ZNF558-201ENST00000301475 ARXQ96QS3 562 aa14.03□□□□□ -0.16
ZNF558-201ENST00000301475 MYO5CQ9NQX4 1742 aa14.03□□□□□ -0.16
ZNF558-201ENST00000301475 L1TD1Q5T7N2 865 aaKnown RBP14.02□□□□□ -0.16
ZNF558-201ENST00000301475 TRMT2AQ8IZ69 625 aaKnown RBP14.02□□□□□ -0.16
ZNF558-201ENST00000301475 PLA2R1Q13018 1463 aa14.02□□□□□ -0.17
ZNF558-201ENST00000301475 WDR7Q9Y4E6 1490 aa14.02□□□□□ -0.17
ZNF558-201ENST00000301475 ATP10BO94823 1461 aa14.01□□□□□ -0.17
ZNF558-201ENST00000301475 NKTRP30414 1462 aaKnown RBP14.01□□□□□ -0.17
ZNF558-201ENST00000301475 TMF1P82094 1093 aa14.01□□□□□ -0.17
ZNF558-201ENST00000301475 BECN1Q14457 450 aa14.01□□□□□ -0.17
ZNF558-201ENST00000301475 CCDC146Q8IYE0 955 aa14.01□□□□□ -0.17
ZNF558-201ENST00000301475 XRCC6P12956 609 aaKnown RBP eCLIP14□□□□□ -0.17
ZNF558-201ENST00000301475 PKNOX2Q96KN3 472 aa13.99□□□□□ -0.17
ZNF558-201ENST00000301475 PANK2Q9BZ23 570 aa13.99□□□□□ -0.17
ZNF558-201ENST00000301475 AMER1Q5JTC6 1135 aaPredicted RBP13.99□□□□□ -0.17
ZNF558-201ENST00000301475 DMRT2Q9Y5R5 561 aa13.99□□□□□ -0.17
ZNF558-201ENST00000301475 EIF2AK4Q9P2K8 1649 aaKnown RBP13.98□□□□□ -0.17
ZNF558-201ENST00000301475 TSPY4P0CV99 314 aa13.98□□□□□ -0.17
ZNF558-201ENST00000301475 TSPY10P0CW01 314 aa13.98□□□□□ -0.17
ZNF558-201ENST00000301475 RNF17Q9BXT8 1623 aaKnown RBP13.98□□□□□ -0.17
ZNF558-201ENST00000301475 MAPK8IP3Q9UPT6 1336 aa13.98□□□□□ -0.17
ZNF558-201ENST00000301475 FSD2A1L4K1 749 aa13.97□□□□□ -0.17
ZNF558-201ENST00000301475 HNRNPMP52272 730 aaKnown RBP eCLIP13.97□□□□□ -0.17
ZNF558-201ENST00000301475 TBC1D2Q9BYX2 928 aa13.97□□□□□ -0.17
ZNF558-201ENST00000301475 APAF1O14727 1248 aa13.96□□□□□ -0.17
ZNF558-201ENST00000301475 KNSTRNQ9Y448 316 aa13.96□□□□□ -0.17
ZNF558-201ENST00000301475 CCDC141Q6ZP82 1450 aa13.96□□□□□ -0.17
ZNF558-201ENST00000301475 CLUAP1Q96AJ1 413 aa13.96□□□□□ -0.17
ZNF558-201ENST00000301475 PIK3C2GO75747 1445 aa13.96□□□□□ -0.18
ZNF558-201ENST00000301475 NAP1L5Q96NT1 182 aaPredicted RBP13.96□□□□□ -0.18
ZNF558-201ENST00000301475 ABCC2Q92887 1545 aa13.95□□□□□ -0.18
ZNF558-201ENST00000301475 CGNL1Q0VF96 1302 aa13.95□□□□□ -0.18
ZNF558-201ENST00000301475 ARHGEF5Q12774 1597 aa13.95□□□□□ -0.18
ZNF558-201ENST00000301475 PANK1Q8TE04 598 aa13.95□□□□□ -0.18
ZNF558-201ENST00000301475 TBC1D32Q96NH3 1257 aa13.95□□□□□ -0.18
ZNF558-201ENST00000301475 ABCA8O94911 1581 aa13.95□□□□□ -0.18
ZNF558-201ENST00000301475 CLCN1P35523 988 aa13.95□□□□□ -0.18
ZNF558-201ENST00000301475 COG6Q9Y2V7 657 aa13.95□□□□□ -0.18
ZNF558-201ENST00000301475 GOLGA6L3A6NEY3 463 aa13.94□□□□□ -0.18
ZNF558-201ENST00000301475 GZF1Q9H116 711 aaPredicted RBP13.94□□□□□ -0.18
ZNF558-201ENST00000301475 PNNQ9H307 717 aaKnown RBP13.94□□□□□ -0.18
ZNF558-201ENST00000301475 ASXL1Q8IXJ9 1541 aa13.93□□□□□ -0.18
ZNF558-201ENST00000301475 PDE3AQ14432 1141 aa13.93□□□□□ -0.18
ZNF558-201ENST00000301475 SYNMO15061 1565 aa13.92□□□□□ -0.18
ZNF558-201ENST00000301475 E9PSI1 815 aa13.92□□□□□ -0.18
ZNF558-201ENST00000301475 MCM4P33991 863 aa13.92□□□□□ -0.18
ZNF558-201ENST00000301475 SPRYD3Q8NCJ5 442 aa13.92□□□□□ -0.18
ZNF558-201ENST00000301475 UNC13BO14795 1591 aa13.92□□□□□ -0.18
ZNF558-201ENST00000301475 MYOM1P52179 1685 aa13.91□□□□□ -0.18
ZNF558-201ENST00000301475 PLXNC1O60486 1568 aa13.91□□□□□ -0.18
ZNF558-201ENST00000301475 OSCARQ8IYS5 282 aa13.91□□□□□ -0.18
ZNF558-201ENST00000301475 IQGAP1P46940 1657 aa13.91□□□□□ -0.18
ZNF558-201ENST00000301475 VSIG10Q8N0Z9 540 aa13.9□□□□□ -0.18
ZNF558-201ENST00000301475 GLIPR1L2Q4G1C9 344 aa13.9□□□□□ -0.18
ZNF558-201ENST00000301475 SAMD9LQ8IVG5 1584 aa13.9□□□□□ -0.18
ZNF558-201ENST00000301475 CENPJQ9HC77 1338 aaPredicted RBP13.9□□□□□ -0.18
ZNF558-201ENST00000301475 ZMYND15Q9H091 742 aa13.89□□□□□ -0.19
ZNF558-201ENST00000301475 NINLQ9Y2I6 1382 aa13.89□□□□□ -0.19
ZNF558-201ENST00000301475 CANXP27824 592 aaKnown RBP13.89□□□□□ -0.19
ZNF558-201ENST00000301475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.89□□□□□ -0.19
ZNF558-201ENST00000301475 UPF2Q9HAU5 1272 aaKnown RBP13.89□□□□□ -0.19
ZNF558-201ENST00000301475 PCDHB15Q9Y5E8 787 aa13.89□□□□□ -0.19
ZNF558-201ENST00000301475 RTEL1-TNFRSF6BF6WH68 1400 aa13.89□□□□□ -0.19
ZNF558-201ENST00000301475 HSP90AA2PQ14568 343 aaPredicted RBP13.88□□□□□ -0.19
ZNF558-201ENST00000301475 TNNQ9UQP3 1299 aa13.88□□□□□ -0.19
ZNF558-201ENST00000301475 IQGAP3Q86VI3 1631 aa13.87□□□□□ -0.19
ZNF558-201ENST00000301475 PDZRN3Q9UPQ7 1066 aa13.87□□□□□ -0.19
ZNF558-201ENST00000301475 ERBB4Q15303 1308 aa13.87□□□□□ -0.19
ZNF558-201ENST00000301475 HSP90AA1P07900 732 aaKnown RBP13.87□□□□□ -0.19
ZNF558-201ENST00000301475 RLBP1P12271 317 aa13.87□□□□□ -0.19
ZNF558-201ENST00000301475 CDC42BPBQ9Y5S2 1711 aa13.86□□□□□ -0.19
ZNF558-201ENST00000301475 MADDQ8WXG6 1647 aa13.86□□□□□ -0.19
ZNF558-201ENST00000301475 RRP9O43818 475 aaKnown RBP13.86□□□□□ -0.19
ZNF558-201ENST00000301475 TRAK2O60296 914 aa13.86□□□□□ -0.19
ZNF558-201ENST00000301475 SHROOM2Q13796 1616 aa13.86□□□□□ -0.19
ZNF558-201ENST00000301475 ZMYM3Q14202 1370 aa13.86□□□□□ -0.19
ZNF558-201ENST00000301475 NPC1L1Q9UHC9 1359 aa13.86□□□□□ -0.19
ZNF558-201ENST00000301475 MRE11P49959 708 aa13.85□□□□□ -0.19
ZNF558-201ENST00000301475 ATP10AO60312 1499 aa13.84□□□□□ -0.19
ZNF558-201ENST00000301475 WWC1Q8IX03 1113 aa13.84□□□□□ -0.19
ZNF558-201ENST00000301475 PMFBP1Q8TBY8 1022 aa13.84□□□□□ -0.19
ZNF558-201ENST00000301475 CHMP5Q9NZZ3 219 aa13.83□□□□□ -0.19
ZNF558-201ENST00000301475 SYCP2Q9BX26 1530 aa13.83□□□□□ -0.2
ZNF558-201ENST00000301475 PREX2Q70Z35 1606 aa13.83□□□□□ -0.2
ZNF558-201ENST00000301475 GRPEL1Q9HAV7 217 aa13.83□□□□□ -0.2
ZNF558-201ENST00000301475 ESPNB1AK53 854 aa13.82□□□□□ -0.2
ZNF558-201ENST00000301475 RARSP54136 660 aaKnown RBP13.82□□□□□ -0.2
ZNF558-201ENST00000301475 ZNF692Q9BU19 519 aaPredicted RBP13.82□□□□□ -0.2
ZNF558-201ENST00000301475 BCL2L13Q9BXK5 485 aa13.81□□□□□ -0.2
ZNF558-201ENST00000301475 SCAF11Q99590 1463 aaKnown RBP13.81□□□□□ -0.2
ZNF558-201ENST00000301475 CEP152O94986 1710 aa13.81□□□□□ -0.2
ZNF558-201ENST00000301475 MYH16Q9H6N6 1097 aa13.81□□□□□ -0.2
ZNF558-201ENST00000301475 CDCA8Q53HL2 280 aa13.8□□□□□ -0.2
ZNF558-201ENST00000301475 C22orf23Q9BZE7 217 aa13.8□□□□□ -0.2
ZNF558-201ENST00000301475 MAST1Q9Y2H9 1570 aa13.8□□□□□ -0.2
ZNF558-201ENST00000301475 KDM5AP29375 1690 aaKnown RBP13.8□□□□□ -0.2
ZNF558-201ENST00000301475 MFAP1P55081 439 aaKnown RBP13.8□□□□□ -0.2
ZNF558-201ENST00000301475 ARHGAP5Q13017 1502 aa13.79□□□□□ -0.2
ZNF558-201ENST00000301475 NGEFQ8N5V2 710 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms