RNA–Protein interactions for RNA: ENST00000299752.8

CDH16-201, Transcript of cadherin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH16, Length 2,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-201ENST00000299752 PREX1Q8TCU6 1659 aa19.65■□□□□ 0.74
CDH16-201ENST00000299752 ARHGAP31Q2M1Z3 1444 aa19.64■□□□□ 0.73
CDH16-201ENST00000299752 CCER2I3L3R5 266 aa19.64■□□□□ 0.73
CDH16-201ENST00000299752 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
CDH16-201ENST00000299752 ADGRB3O60242 1522 aa19.63■□□□□ 0.73
CDH16-201ENST00000299752 GPRASP1Q5JY77 1395 aa19.62■□□□□ 0.73
CDH16-201ENST00000299752 ZMYM3Q14202 1370 aa19.61■□□□□ 0.73
CDH16-201ENST00000299752 MYO5BQ9ULV0 1848 aa19.61■□□□□ 0.73
CDH16-201ENST00000299752 ERVK-7P63135 1459 aa19.6■□□□□ 0.73
CDH16-201ENST00000299752 TMEM132EQ6IEE7 984 aa19.6■□□□□ 0.73
CDH16-201ENST00000299752 SLC52A1Q9NWF4 448 aa19.59■□□□□ 0.73
CDH16-201ENST00000299752 PIK3C2BO00750 1634 aa19.57■□□□□ 0.72
CDH16-201ENST00000299752 STAC3Q96MF2 364 aa19.57■□□□□ 0.72
CDH16-201ENST00000299752 PPP6R1Q9UPN7 881 aa19.57■□□□□ 0.72
CDH16-201ENST00000299752 IFT172Q9UG01 1749 aa19.56■□□□□ 0.72
CDH16-201ENST00000299752 LAMC1P11047 1609 aa19.55■□□□□ 0.72
CDH16-201ENST00000299752 NEURL4Q96JN8 1562 aa19.54■□□□□ 0.72
CDH16-201ENST00000299752 PPLO60437 1756 aa19.54■□□□□ 0.72
CDH16-201ENST00000299752 TRAK1Q9UPV9 953 aa19.53■□□□□ 0.72
CDH16-201ENST00000299752 PRKRIP1Q9H875 184 aaPredicted RBP19.53■□□□□ 0.72
CDH16-201ENST00000299752 MYOM2P54296 1465 aa19.53■□□□□ 0.72
CDH16-201ENST00000299752 GTF3C3Q9Y5Q9 886 aa19.53■□□□□ 0.72
CDH16-201ENST00000299752 TESK2Q96S53 571 aa19.52■□□□□ 0.72
CDH16-201ENST00000299752 DISP3Q9P2K9 1392 aa19.52■□□□□ 0.72
CDH16-201ENST00000299752 TMEM131LA2VDJ0 1609 aa19.51■□□□□ 0.71
CDH16-201ENST00000299752 VGFO15240 615 aaPredicted RBP19.5■□□□□ 0.71
CDH16-201ENST00000299752 NEXMIFQ5QGS0 1516 aa19.5■□□□□ 0.71
CDH16-201ENST00000299752 STK26Q9P289 416 aa19.5■□□□□ 0.71
CDH16-201ENST00000299752 RPGRIP1LQ68CZ1 1315 aa19.49■□□□□ 0.71
CDH16-201ENST00000299752 PIK3C2GO75747 1445 aa19.48■□□□□ 0.71
CDH16-201ENST00000299752 SAFB2Q14151 953 aaKnown RBP eCLIP19.48■□□□□ 0.71
CDH16-201ENST00000299752 SPATA31D1Q6ZQQ2 1576 aa19.48■□□□□ 0.71
CDH16-201ENST00000299752 C14orf93Q9H972 538 aaKnown RBP19.47■□□□□ 0.71
CDH16-201ENST00000299752 SCAF11Q99590 1463 aaKnown RBP19.47■□□□□ 0.71
CDH16-201ENST00000299752 TNRQ92752 1358 aa19.46■□□□□ 0.71
CDH16-201ENST00000299752 CCDC184Q52MB2 194 aa19.46■□□□□ 0.71
CDH16-201ENST00000299752 NRXN1Q9ULB1 1477 aa19.46■□□□□ 0.71
CDH16-201ENST00000299752 IQGAP1P46940 1657 aa19.45■□□□□ 0.7
CDH16-201ENST00000299752 TMF1P82094 1093 aa19.44■□□□□ 0.7
CDH16-201ENST00000299752 A2ML1A8K2U0 1454 aa19.44■□□□□ 0.7
CDH16-201ENST00000299752 BCANQ96GW7 911 aa19.44■□□□□ 0.7
CDH16-201ENST00000299752 FER1L4A9Z1Z3 1794 aa19.43■□□□□ 0.7
CDH16-201ENST00000299752 KIAA1210Q9ULL0 1709 aa19.42■□□□□ 0.7
CDH16-201ENST00000299752 RIMS2Q9UQ26 1411 aa19.4■□□□□ 0.7
CDH16-201ENST00000299752 MRS2Q9HD23 443 aa19.4■□□□□ 0.7
CDH16-201ENST00000299752 C3P01024 1663 aa19.39■□□□□ 0.69
CDH16-201ENST00000299752 EIF3AQ14152 1382 aaKnown RBP19.39■□□□□ 0.69
CDH16-201ENST00000299752 ADGRB1O14514 1584 aa19.37■□□□□ 0.69
CDH16-201ENST00000299752 CENPJQ9HC77 1338 aaPredicted RBP19.37■□□□□ 0.69
CDH16-201ENST00000299752 PANK3Q9H999 370 aa19.36■□□□□ 0.69
CDH16-201ENST00000299752 FAM9BQ8IZU0 186 aa19.34■□□□□ 0.69
CDH16-201ENST00000299752 RIMS1Q86UR5 1692 aaKnown RBP19.34■□□□□ 0.69
CDH16-201ENST00000299752 ASXL1Q8IXJ9 1541 aa19.33■□□□□ 0.69
CDH16-201ENST00000299752 LTKP29376 864 aa19.32■□□□□ 0.68
CDH16-201ENST00000299752 HNRNPUQ00839 825 aaKnown RBP eCLIP19.32■□□□□ 0.68
CDH16-201ENST00000299752 SETBP1Q9Y6X0 1596 aa19.32■□□□□ 0.68
CDH16-201ENST00000299752 CC2D1BQ5T0F9 858 aaKnown RBP19.32■□□□□ 0.68
CDH16-201ENST00000299752 ZFYVE9O95405 1425 aa19.31■□□□□ 0.68
CDH16-201ENST00000299752 PER1O15534 1290 aaPredicted RBP19.31■□□□□ 0.68
CDH16-201ENST00000299752 PRAM1Q96QH2 718 aa19.31■□□□□ 0.68
CDH16-201ENST00000299752 ALKQ9UM73 1620 aa19.3■□□□□ 0.68
CDH16-201ENST00000299752 MINK1Q8N4C8 1332 aaPredicted RBP19.3■□□□□ 0.68
CDH16-201ENST00000299752 UBR1Q8IWV7 1749 aa19.3■□□□□ 0.68
CDH16-201ENST00000299752 CDCA8Q53HL2 280 aa19.29■□□□□ 0.68
CDH16-201ENST00000299752 TXNDC2Q86VQ3 553 aa19.29■□□□□ 0.68
CDH16-201ENST00000299752 POGKQ9P215 609 aa19.29■□□□□ 0.68
CDH16-201ENST00000299752 WAPLQ7Z5K2 1190 aa19.29■□□□□ 0.68
CDH16-201ENST00000299752 TMC1Q8TDI8 760 aa19.29■□□□□ 0.68
CDH16-201ENST00000299752 SLC26A8Q96RN1 970 aa19.29■□□□□ 0.68
CDH16-201ENST00000299752 TMEM2Q9UHN6 1383 aa19.29■□□□□ 0.68
CDH16-201ENST00000299752 QRICH2Q9H0J4 1663 aa19.28■□□□□ 0.68
CDH16-201ENST00000299752 PTPRMP28827 1452 aa19.28■□□□□ 0.68
CDH16-201ENST00000299752 SENP3-EIF4A1A0A087X0R7 540 aa19.27■□□□□ 0.68
CDH16-201ENST00000299752 YTHDC2Q9H6S0 1430 aaKnown RBP19.27■□□□□ 0.68
CDH16-201ENST00000299752 RALBP1Q15311 655 aa19.26■□□□□ 0.67
CDH16-201ENST00000299752 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.26■□□□□ 0.67
CDH16-201ENST00000299752 CABP2Q9NPB3 220 aa19.26■□□□□ 0.67
CDH16-201ENST00000299752 METP08581 1390 aa19.26■□□□□ 0.67
CDH16-201ENST00000299752 ARHGEF28Q8N1W1 1705 aaKnown RBP19.25■□□□□ 0.67
CDH16-201ENST00000299752 KTN1Q86UP2 1357 aaKnown RBP19.25■□□□□ 0.67
CDH16-201ENST00000299752 SLC12A5Q9H2X9 1139 aa19.24■□□□□ 0.67
CDH16-201ENST00000299752 MYBBP1AQ9BQG0 1328 aaKnown RBP19.23■□□□□ 0.67
CDH16-201ENST00000299752 NLRP1Q9C000 1473 aa19.23■□□□□ 0.67
CDH16-201ENST00000299752 PLEKHH1Q9ULM0 1364 aa19.23■□□□□ 0.67
CDH16-201ENST00000299752 SLC24A1O60721 1099 aa19.23■□□□□ 0.67
CDH16-201ENST00000299752 HDGFP51858 240 aaKnown RBP19.23■□□□□ 0.67
CDH16-201ENST00000299752 KDM5AP29375 1690 aaKnown RBP19.22■□□□□ 0.67
CDH16-201ENST00000299752 NRXN3Q9Y4C0 1643 aa19.22■□□□□ 0.67
CDH16-201ENST00000299752 SRPK2P78362 688 aaKnown RBP19.22■□□□□ 0.67
CDH16-201ENST00000299752 EID1Q9Y6B2 187 aa19.22■□□□□ 0.67
CDH16-201ENST00000299752 PARD3Q8TEW0 1356 aa19.21■□□□□ 0.67
CDH16-201ENST00000299752 MYO3AQ8NEV4 1616 aa19.21■□□□□ 0.67
CDH16-201ENST00000299752 KNSTRNQ9Y448 316 aa19.2■□□□□ 0.66
CDH16-201ENST00000299752 THEMISQ8N1K5 641 aaPredicted RBP19.2■□□□□ 0.66
CDH16-201ENST00000299752 MYOM1P52179 1685 aa19.19■□□□□ 0.66
CDH16-201ENST00000299752 SBNO2Q9Y2G9 1366 aa19.19■□□□□ 0.66
CDH16-201ENST00000299752 ADAMTSL3P82987 1691 aa19.19■□□□□ 0.66
CDH16-201ENST00000299752 EVC2Q86UK5 1308 aa19.18■□□□□ 0.66
CDH16-201ENST00000299752 PNISRQ8TF01 805 aaKnown RBP19.18■□□□□ 0.66
CDH16-201ENST00000299752 CARD14Q9BXL6 1004 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms