RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 CD109Q6YHK3 1445 aa17.92■□□□□ 0.46
CDH8-201ENST00000299345 MSH5O43196 834 aa17.91■□□□□ 0.46
CDH8-201ENST00000299345 ZNF518AQ6AHZ1 1483 aa17.9■□□□□ 0.46
CDH8-201ENST00000299345 GOLGA2Q08379 1002 aa17.89■□□□□ 0.46
CDH8-201ENST00000299345 CENPJQ9HC77 1338 aaPredicted RBP17.89■□□□□ 0.46
CDH8-201ENST00000299345 CCDC146Q8IYE0 955 aa17.89■□□□□ 0.45
CDH8-201ENST00000299345 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.89■□□□□ 0.45
CDH8-201ENST00000299345 TET3O43151 1660 aa17.88■□□□□ 0.45
CDH8-201ENST00000299345 CLTCL1P53675 1640 aa17.88■□□□□ 0.45
CDH8-201ENST00000299345 MADDQ8WXG6 1647 aa17.87■□□□□ 0.45
CDH8-201ENST00000299345 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
CDH8-201ENST00000299345 TNNT2P45379 298 aaPredicted RBP17.87■□□□□ 0.45
CDH8-201ENST00000299345 NUTM2DQ5VT03 806 aaPredicted RBP17.86■□□□□ 0.45
CDH8-201ENST00000299345 ABCA9Q8IUA7 1624 aa17.86■□□□□ 0.45
CDH8-201ENST00000299345 RAPGEF3O95398 923 aa17.86■□□□□ 0.45
CDH8-201ENST00000299345 SPHKAPQ2M3C7 1700 aa17.86■□□□□ 0.45
CDH8-201ENST00000299345 TMEM132EQ6IEE7 984 aa17.85■□□□□ 0.45
CDH8-201ENST00000299345 MORC1Q86VD1 984 aa17.85■□□□□ 0.45
CDH8-201ENST00000299345 INSRP06213 1382 aa17.85■□□□□ 0.45
CDH8-201ENST00000299345 NPM2Q86SE8 214 aaKnown RBP17.85■□□□□ 0.45
CDH8-201ENST00000299345 BLMP54132 1417 aaPredicted RBP17.85■□□□□ 0.45
CDH8-201ENST00000299345 UGGT1Q9NYU2 1555 aa17.84■□□□□ 0.45
CDH8-201ENST00000299345 CRBNQ96SW2 442 aa17.84■□□□□ 0.45
CDH8-201ENST00000299345 NOS1P29475 1434 aa17.84■□□□□ 0.45
CDH8-201ENST00000299345 INO80Q9ULG1 1556 aaPredicted RBP17.84■□□□□ 0.45
CDH8-201ENST00000299345 ASXL1Q8IXJ9 1541 aa17.84■□□□□ 0.45
CDH8-201ENST00000299345 APAF1O14727 1248 aa17.84■□□□□ 0.45
CDH8-201ENST00000299345 TCERG1O14776 1098 aaKnown RBP17.83■□□□□ 0.45
CDH8-201ENST00000299345 RNF17Q9BXT8 1623 aaKnown RBP17.82■□□□□ 0.44
CDH8-201ENST00000299345 VGFO15240 615 aaPredicted RBP17.81■□□□□ 0.44
CDH8-201ENST00000299345 NOP58Q9Y2X3 529 aaKnown RBP17.81■□□□□ 0.44
CDH8-201ENST00000299345 SAFB2Q14151 953 aaKnown RBP eCLIP17.8■□□□□ 0.44
CDH8-201ENST00000299345 ZBTB47Q9UFB7 747 aaPredicted RBP17.8■□□□□ 0.44
CDH8-201ENST00000299345 DEPDC5O75140 1603 aa17.79■□□□□ 0.44
CDH8-201ENST00000299345 CEP152O94986 1710 aa17.79■□□□□ 0.44
CDH8-201ENST00000299345 SLC12A5Q9H2X9 1139 aa17.79■□□□□ 0.44
CDH8-201ENST00000299345 NPC1L1Q9UHC9 1359 aa17.79■□□□□ 0.44
CDH8-201ENST00000299345 RPGRIP1LQ68CZ1 1315 aa17.79■□□□□ 0.44
CDH8-201ENST00000299345 C14orf93Q9H972 538 aaKnown RBP17.79■□□□□ 0.44
CDH8-201ENST00000299345 CANXP27824 592 aaKnown RBP17.79■□□□□ 0.44
CDH8-201ENST00000299345 NEUROD2Q15784 382 aa17.79■□□□□ 0.44
CDH8-201ENST00000299345 MYOM2P54296 1465 aa17.78■□□□□ 0.44
CDH8-201ENST00000299345 CARD14Q9BXL6 1004 aa17.78■□□□□ 0.44
CDH8-201ENST00000299345 STAG3Q9UJ98 1225 aa17.78■□□□□ 0.44
CDH8-201ENST00000299345 PIK3C2GO75747 1445 aa17.78■□□□□ 0.44
CDH8-201ENST00000299345 POGZQ7Z3K3 1410 aa17.78■□□□□ 0.44
CDH8-201ENST00000299345 EFCAB6Q5THR3 1501 aa17.78■□□□□ 0.44
CDH8-201ENST00000299345 SYNMO15061 1565 aa17.78■□□□□ 0.44
CDH8-201ENST00000299345 CFAP53Q96M91 514 aa17.77■□□□□ 0.44
CDH8-201ENST00000299345 VWDEQ8N2E2 1590 aa17.77■□□□□ 0.44
CDH8-201ENST00000299345 ZMYM4Q5VZL5 1548 aa17.77■□□□□ 0.43
CDH8-201ENST00000299345 DUSP27Q5VZP5 1158 aa17.77■□□□□ 0.43
CDH8-201ENST00000299345 STK26Q9P289 416 aa17.77■□□□□ 0.43
CDH8-201ENST00000299345 PLEKHH1Q9ULM0 1364 aa17.77■□□□□ 0.43
CDH8-201ENST00000299345 IQGAP1P46940 1657 aa17.76■□□□□ 0.43
CDH8-201ENST00000299345 NPATQ14207 1427 aa17.76■□□□□ 0.43
CDH8-201ENST00000299345 EVC2Q86UK5 1308 aa17.75■□□□□ 0.43
CDH8-201ENST00000299345 ERVK-7P63135 1459 aa17.74■□□□□ 0.43
CDH8-201ENST00000299345 E9PSI1 815 aa17.74■□□□□ 0.43
CDH8-201ENST00000299345 SLFN5Q08AF3 891 aa17.74■□□□□ 0.43
CDH8-201ENST00000299345 MAP3K4Q9Y6R4 1608 aa17.74■□□□□ 0.43
CDH8-201ENST00000299345 IPO9Q96P70 1041 aaKnown RBP17.74■□□□□ 0.43
CDH8-201ENST00000299345 C20orf194Q5TEA3 1177 aa17.73■□□□□ 0.43
CDH8-201ENST00000299345 CYB5RLQ6IPT4 315 aa17.73■□□□□ 0.43
CDH8-201ENST00000299345 PDE4AP27815 886 aa17.73■□□□□ 0.43
CDH8-201ENST00000299345 NGEFQ8N5V2 710 aa17.73■□□□□ 0.43
CDH8-201ENST00000299345 CGNL1Q0VF96 1302 aa17.73■□□□□ 0.43
CDH8-201ENST00000299345 SRPK2P78362 688 aaKnown RBP17.73■□□□□ 0.43
CDH8-201ENST00000299345 NSD3Q9BZ95 1437 aa17.73■□□□□ 0.43
CDH8-201ENST00000299345 MLH3Q9UHC1 1453 aa17.73■□□□□ 0.43
CDH8-201ENST00000299345 KIF1BO60333 1816 aa17.72■□□□□ 0.43
CDH8-201ENST00000299345 KIDINS220Q9ULH0 1771 aa17.72■□□□□ 0.43
CDH8-201ENST00000299345 KDM5AP29375 1690 aaKnown RBP17.71■□□□□ 0.43
CDH8-201ENST00000299345 MS4A1P11836 297 aa17.71■□□□□ 0.43
CDH8-201ENST00000299345 POGKQ9P215 609 aa17.71■□□□□ 0.43
CDH8-201ENST00000299345 CFAP65Q6ZU64 1925 aaKnown RBP17.71■□□□□ 0.42
CDH8-201ENST00000299345 SBNO2Q9Y2G9 1366 aa17.7■□□□□ 0.42
CDH8-201ENST00000299345 MROH1Q8NDA8 1641 aa17.7■□□□□ 0.42
CDH8-201ENST00000299345 IDI1Q13907 227 aa17.7■□□□□ 0.42
CDH8-201ENST00000299345 NBR1Q14596 966 aa17.7■□□□□ 0.42
CDH8-201ENST00000299345 LMTK2Q8IWU2 1503 aa17.69■□□□□ 0.42
CDH8-201ENST00000299345 PPRC1Q5VV67 1664 aaKnown RBP17.69■□□□□ 0.42
CDH8-201ENST00000299345 ABCA6Q8N139 1617 aa17.69■□□□□ 0.42
CDH8-201ENST00000299345 SLC52A1Q9NWF4 448 aa17.69■□□□□ 0.42
CDH8-201ENST00000299345 RRP7AQ9Y3A4 280 aaKnown RBP17.69■□□□□ 0.42
CDH8-201ENST00000299345 CABP2Q9NPB3 220 aa17.68■□□□□ 0.42
CDH8-201ENST00000299345 MTHFSP49914 203 aa17.68■□□□□ 0.42
CDH8-201ENST00000299345 CFAP74Q9C0B2 1584 aa17.67■□□□□ 0.42
CDH8-201ENST00000299345 NEURL4Q96JN8 1562 aa17.67■□□□□ 0.42
CDH8-201ENST00000299345 KIAA1210Q9ULL0 1709 aa17.67■□□□□ 0.42
CDH8-201ENST00000299345 RTL5Q5HYW3 569 aaPredicted RBP17.67■□□□□ 0.42
CDH8-201ENST00000299345 CENPQQ7L2Z9 268 aaPredicted RBP17.67■□□□□ 0.42
CDH8-201ENST00000299345 ZNF521Q96K83 1311 aa17.67■□□□□ 0.42
CDH8-201ENST00000299345 U2AF1L5P0DN76 240 aaPredicted RBP17.66■□□□□ 0.42
CDH8-201ENST00000299345 U2AF1Q01081 240 aaKnown RBP eCLIP17.66■□□□□ 0.42
CDH8-201ENST00000299345 RUNDC1Q96C34 613 aa17.66■□□□□ 0.42
CDH8-201ENST00000299345 DAXXQ9UER7 740 aaPredicted RBP17.65■□□□□ 0.42
CDH8-201ENST00000299345 HECW2Q9P2P5 1572 aa17.65■□□□□ 0.42
CDH8-201ENST00000299345 PAK3O75914 559 aaPredicted RBP17.65■□□□□ 0.42
CDH8-201ENST00000299345 FRAT1Q92837 279 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms