RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 PSME1Q06323 249 aa17.45■□□□□ 0.38
SPRED1-201ENST00000299084 KAT6BQ8WYB5 2073 aa17.45■□□□□ 0.38
SPRED1-201ENST00000299084 RUFY2Q8WXA3 655 aa17.45■□□□□ 0.38
SPRED1-201ENST00000299084 NOM1Q5C9Z4 860 aaKnown RBP17.45■□□□□ 0.38
SPRED1-201ENST00000299084 CEP162Q5TB80 1403 aa17.45■□□□□ 0.38
SPRED1-201ENST00000299084 NEFHP12036 1026 aa17.45■□□□□ 0.38
SPRED1-201ENST00000299084 TRIM21P19474 475 aaKnown RBP17.44■□□□□ 0.38
SPRED1-201ENST00000299084 NEBLO76041 1014 aa17.44■□□□□ 0.38
SPRED1-201ENST00000299084 DCTN1Q14203 1278 aa17.44■□□□□ 0.38
SPRED1-201ENST00000299084 DDX58O95786 925 aaKnown RBP17.44■□□□□ 0.38
SPRED1-201ENST00000299084 ANKRD18AQ8IVF6 992 aa17.44■□□□□ 0.38
SPRED1-201ENST00000299084 FOXD4L6Q3SYB3 417 aaPredicted RBP17.43■□□□□ 0.38
SPRED1-201ENST00000299084 FOXD4L3Q6VB84 417 aaPredicted RBP17.43■□□□□ 0.38
SPRED1-201ENST00000299084 WDHD1O75717 1129 aaPredicted RBP17.43■□□□□ 0.38
SPRED1-201ENST00000299084 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.43■□□□□ 0.38
SPRED1-201ENST00000299084 ATF3P18847 181 aa17.42■□□□□ 0.38
SPRED1-201ENST00000299084 XBP1P17861 261 aa17.42■□□□□ 0.38
SPRED1-201ENST00000299084 WRNQ14191 1432 aaPredicted RBP eCLIP17.41■□□□□ 0.38
SPRED1-201ENST00000299084 EEA1Q15075 1411 aa17.41■□□□□ 0.38
SPRED1-201ENST00000299084 HSP90AB4PQ58FF6 505 aa17.41■□□□□ 0.38
SPRED1-201ENST00000299084 MTMR7Q9Y216 660 aa17.41■□□□□ 0.38
SPRED1-201ENST00000299084 WASHC2CQ9Y4E1 1318 aa17.41■□□□□ 0.38
SPRED1-201ENST00000299084 DESP17661 470 aa17.41■□□□□ 0.38
SPRED1-201ENST00000299084 SEPT7Q16181 437 aaKnown RBP17.4■□□□□ 0.38
SPRED1-201ENST00000299084 MPHOSPH10O00566 681 aaKnown RBP17.4■□□□□ 0.38
SPRED1-201ENST00000299084 CDK5RAP3Q96JB5 506 aa17.39■□□□□ 0.37
SPRED1-201ENST00000299084 EIF2S2P20042 333 aaKnown RBP17.39■□□□□ 0.37
SPRED1-201ENST00000299084 ANKRD62A6NC57 917 aa17.39■□□□□ 0.37
SPRED1-201ENST00000299084 IFIT2P09913 472 aaKnown RBP17.39■□□□□ 0.37
SPRED1-201ENST00000299084 ZKSCAN1P17029 563 aaPredicted RBP17.39■□□□□ 0.37
SPRED1-201ENST00000299084 H0YHG0 523 aa17.38■□□□□ 0.37
SPRED1-201ENST00000299084 SKIDA1Q1XH10 827 aa17.38■□□□□ 0.37
SPRED1-201ENST00000299084 NUTM2DQ5VT03 806 aaPredicted RBP17.38■□□□□ 0.37
SPRED1-201ENST00000299084 IBSPP21815 317 aaPredicted RBP17.38■□□□□ 0.37
SPRED1-201ENST00000299084 ACBD3Q9H3P7 528 aa17.38■□□□□ 0.37
SPRED1-201ENST00000299084 RNF20Q5VTR2 975 aa17.37■□□□□ 0.37
SPRED1-201ENST00000299084 SLC3A2P08195 630 aaKnown RBP17.37■□□□□ 0.37
SPRED1-201ENST00000299084 PAXIP1Q6ZW49 1069 aaPredicted RBP17.37■□□□□ 0.37
SPRED1-201ENST00000299084 ANO2Q9NQ90 1003 aa17.37■□□□□ 0.37
SPRED1-201ENST00000299084 COG3Q96JB2 828 aa17.37■□□□□ 0.37
SPRED1-201ENST00000299084 BCL11BQ9C0K0 894 aaPredicted RBP17.37■□□□□ 0.37
SPRED1-201ENST00000299084 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
SPRED1-201ENST00000299084 CAGE1Q8TC20 777 aa17.35■□□□□ 0.37
SPRED1-201ENST00000299084 DNAI2Q9GZS0 605 aa17.35■□□□□ 0.37
SPRED1-201ENST00000299084 KIF27Q86VH2 1401 aa17.35■□□□□ 0.37
SPRED1-201ENST00000299084 CARMIL2Q6F5E8 1435 aa17.35■□□□□ 0.37
SPRED1-201ENST00000299084 HSP90AB3PQ58FF7 597 aa17.34■□□□□ 0.37
SPRED1-201ENST00000299084 MATR3P43243 847 aaKnown RBP eCLIP17.34■□□□□ 0.371e-11■■■■■ 41.7
SPRED1-201ENST00000299084 RALYLQ86SE5 291 aaKnown RBP17.34■□□□□ 0.37
SPRED1-201ENST00000299084 CHMP5Q9NZZ3 219 aa17.34■□□□□ 0.37
SPRED1-201ENST00000299084 STK11IPQ8N1F8 1099 aa17.34■□□□□ 0.37
SPRED1-201ENST00000299084 ATP2B2Q01814 1243 aa17.34■□□□□ 0.37
SPRED1-201ENST00000299084 G3BP1Q13283 466 aaKnown RBP eCLIP17.34■□□□□ 0.37
SPRED1-201ENST00000299084 PDCL3Q9H2J4 239 aa17.34■□□□□ 0.37
SPRED1-201ENST00000299084 KRT18P05783 430 aaKnown RBP17.33■□□□□ 0.37
SPRED1-201ENST00000299084 RCAN3Q9UKA8 241 aa17.33■□□□□ 0.36
SPRED1-201ENST00000299084 BICD2Q8TD16 824 aa17.32■□□□□ 0.36
SPRED1-201ENST00000299084 PLIN1O60240 522 aa17.32■□□□□ 0.36
SPRED1-201ENST00000299084 OLFM4Q6UX06 510 aa17.32■□□□□ 0.36
SPRED1-201ENST00000299084 RSPH6AQ9H0K4 717 aa17.32■□□□□ 0.36
SPRED1-201ENST00000299084 CEP164Q9UPV0 1460 aa17.32■□□□□ 0.36
SPRED1-201ENST00000299084 SEPT11Q9NVA2 429 aaKnown RBP17.32■□□□□ 0.36
SPRED1-201ENST00000299084 RBM19Q9Y4C8 960 aaKnown RBP17.32■□□□□ 0.36
SPRED1-201ENST00000299084 FAM13BQ9NYF5 915 aa17.31■□□□□ 0.36
SPRED1-201ENST00000299084 KIF3BO15066 747 aa17.31■□□□□ 0.36
SPRED1-201ENST00000299084 RBM5P52756 815 aaKnown RBP eCLIP17.31■□□□□ 0.36
SPRED1-201ENST00000299084 EFCAB2Q5VUJ9 269 aa17.3■□□□□ 0.36
SPRED1-201ENST00000299084 ERLIN2O94905 339 aa17.3■□□□□ 0.36
SPRED1-201ENST00000299084 HSP90B2PQ58FF3 399 aa17.3■□□□□ 0.36
SPRED1-201ENST00000299084 DDX11L8A8MPP1 907 aa17.3■□□□□ 0.36
SPRED1-201ENST00000299084 EZRP15311 586 aaKnown RBP17.3■□□□□ 0.36
SPRED1-201ENST00000299084 GRIPAP1Q4V328 841 aa17.3■□□□□ 0.36
SPRED1-201ENST00000299084 HMGN5P82970 282 aaKnown RBP17.3■□□□□ 0.36
SPRED1-201ENST00000299084 KIF6Q6ZMV9 814 aa17.29■□□□□ 0.36
SPRED1-201ENST00000299084 ANKRD45Q5TZF3 282 aa17.29■□□□□ 0.36
SPRED1-201ENST00000299084 CLUAP1Q96AJ1 413 aa17.29■□□□□ 0.36
SPRED1-201ENST00000299084 CENPJQ9HC77 1338 aaPredicted RBP17.29■□□□□ 0.36
SPRED1-201ENST00000299084 SART3Q15020 963 aaKnown RBP17.29■□□□□ 0.36
SPRED1-201ENST00000299084 DHX37Q8IY37 1157 aaKnown RBP17.29■□□□□ 0.36
SPRED1-201ENST00000299084 MAGEC2Q9UBF1 373 aaPredicted RBP17.29■□□□□ 0.36
SPRED1-201ENST00000299084 SASS6Q6UVJ0 657 aa17.28■□□□□ 0.36
SPRED1-201ENST00000299084 WASHC4Q2M389 1173 aa17.28■□□□□ 0.36
SPRED1-201ENST00000299084 TXLNAP40222 546 aa17.28■□□□□ 0.36
SPRED1-201ENST00000299084 FOSBP53539 338 aa17.28■□□□□ 0.36
SPRED1-201ENST00000299084 RALBP1Q15311 655 aa17.27■□□□□ 0.36
SPRED1-201ENST00000299084 DDX49Q9Y6V7 483 aaKnown RBP17.27■□□□□ 0.36
SPRED1-201ENST00000299084 FHAD1B1AJZ9 1412 aa17.27■□□□□ 0.36
SPRED1-201ENST00000299084 NECTIN2Q92692 538 aa17.27■□□□□ 0.36
SPRED1-201ENST00000299084 RAPGEF4Q8WZA2 1011 aa17.27■□□□□ 0.36
SPRED1-201ENST00000299084 CCDC146Q8IYE0 955 aa17.27■□□□□ 0.35
SPRED1-201ENST00000299084 GBP2P32456 591 aaPredicted RBP17.26■□□□□ 0.35
SPRED1-201ENST00000299084 ENOX2Q16206 610 aaKnown RBP17.26■□□□□ 0.35
SPRED1-201ENST00000299084 RIC3Q7Z5B4 369 aa17.26■□□□□ 0.35
SPRED1-201ENST00000299084 DRC1Q96MC2 740 aa17.26■□□□□ 0.35
SPRED1-201ENST00000299084 MYCNP04198 464 aaPredicted RBP17.25■□□□□ 0.35
SPRED1-201ENST00000299084 MNS1Q8NEH6 495 aa17.25■□□□□ 0.35
SPRED1-201ENST00000299084 PKD2Q13563 968 aa17.25■□□□□ 0.35
SPRED1-201ENST00000299084 NEUROD6Q96NK8 337 aa17.25■□□□□ 0.35
SPRED1-201ENST00000299084 ARGLU1Q9NWB6 273 aaPredicted RBP17.25■□□□□ 0.35
SPRED1-201ENST00000299084 TBC1D2BQ9UPU7 963 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms