RNA–Protein interactions for RNA: ENST00000297792.9

KDM1B-201, Transcript of lysine demethylase 1B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene KDM1B, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-201ENST00000297792 SPINK5Q9NQ38 1064 aaPredicted RBP18.61■□□□□ 0.57
KDM1B-201ENST00000297792 CLUAP1Q96AJ1 413 aa18.61■□□□□ 0.57
KDM1B-201ENST00000297792 PANK1Q8TE04 598 aa18.6■□□□□ 0.57
KDM1B-201ENST00000297792 TRAPPC8Q9Y2L5 1435 aa18.59■□□□□ 0.57
KDM1B-201ENST00000297792 KIF3BO15066 747 aa18.59■□□□□ 0.57
KDM1B-201ENST00000297792 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.59■□□□□ 0.571e-6■■■■□ 23.9
KDM1B-201ENST00000297792 SPAG9O60271 1321 aaKnown RBP18.59■□□□□ 0.57
KDM1B-201ENST00000297792 C8orf34Q49A92 452 aa18.56■□□□□ 0.56
KDM1B-201ENST00000297792 NUTM2DQ5VT03 806 aaPredicted RBP18.55■□□□□ 0.56
KDM1B-201ENST00000297792 CFAP70Q5T0N1 1121 aa18.55■□□□□ 0.56
KDM1B-201ENST00000297792 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
KDM1B-201ENST00000297792 CDCA8Q53HL2 280 aa18.53■□□□□ 0.56
KDM1B-201ENST00000297792 ARHGEF5Q12774 1597 aa18.53■□□□□ 0.56
KDM1B-201ENST00000297792 IGHDP01880 384 aa18.53■□□□□ 0.56
KDM1B-201ENST00000297792 PREX2Q70Z35 1606 aa18.52■□□□□ 0.56
KDM1B-201ENST00000297792 WASHC2CQ9Y4E1 1318 aa18.52■□□□□ 0.56
KDM1B-201ENST00000297792 SLFN5Q08AF3 891 aa18.52■□□□□ 0.56
KDM1B-201ENST00000297792 COL17A1Q9UMD9 1497 aaPredicted RBP18.52■□□□□ 0.56
KDM1B-201ENST00000297792 KDM2BQ8NHM5 1336 aa18.51■□□□□ 0.55
KDM1B-201ENST00000297792 AMER1Q5JTC6 1135 aaPredicted RBP18.51■□□□□ 0.55
KDM1B-201ENST00000297792 CHD1O14646 1710 aa18.51■□□□□ 0.55
KDM1B-201ENST00000297792 TRPM1Q7Z4N2 1603 aa18.5■□□□□ 0.55
KDM1B-201ENST00000297792 CENPJQ9HC77 1338 aaPredicted RBP18.5■□□□□ 0.55
KDM1B-201ENST00000297792 BLMP54132 1417 aaPredicted RBP18.49■□□□□ 0.55
KDM1B-201ENST00000297792 SEC24BO95487 1268 aa18.48■□□□□ 0.55
KDM1B-201ENST00000297792 GZF1Q9H116 711 aaPredicted RBP18.48■□□□□ 0.55
KDM1B-201ENST00000297792 MAGI2Q86UL8 1455 aa18.48■□□□□ 0.55
KDM1B-201ENST00000297792 SAFB2Q14151 953 aaKnown RBP eCLIP18.47■□□□□ 0.55
KDM1B-201ENST00000297792 TNNQ9UQP3 1299 aa18.47■□□□□ 0.55
KDM1B-201ENST00000297792 PRKCSHP14314 528 aaPredicted RBP18.47■□□□□ 0.55
KDM1B-201ENST00000297792 UPF2Q9HAU5 1272 aaKnown RBP18.47■□□□□ 0.55
KDM1B-201ENST00000297792 MORC1Q86VD1 984 aa18.46■□□□□ 0.55
KDM1B-201ENST00000297792 TRAK1Q9UPV9 953 aa18.46■□□□□ 0.55
KDM1B-201ENST00000297792 ADGRF5Q8IZF2 1346 aa18.46■□□□□ 0.55
KDM1B-201ENST00000297792 GPRASP1Q5JY77 1395 aa18.46■□□□□ 0.55
KDM1B-201ENST00000297792 E9PSI1 815 aa18.45■□□□□ 0.54
KDM1B-201ENST00000297792 SCAPERQ9BY12 1400 aa18.45■□□□□ 0.54
KDM1B-201ENST00000297792 GGT6Q6P531 493 aa18.45■□□□□ 0.54
KDM1B-201ENST00000297792 POGKQ9P215 609 aa18.44■□□□□ 0.54
KDM1B-201ENST00000297792 TMEM132EQ6IEE7 984 aa18.44■□□□□ 0.54
KDM1B-201ENST00000297792 PLCH2O75038 1416 aa18.44■□□□□ 0.54
KDM1B-201ENST00000297792 BECN1Q14457 450 aa18.44■□□□□ 0.54
KDM1B-201ENST00000297792 ZMYM4Q5VZL5 1548 aa18.43■□□□□ 0.54
KDM1B-201ENST00000297792 ABCC2Q92887 1545 aa18.41■□□□□ 0.54
KDM1B-201ENST00000297792 UGGT1Q9NYU2 1555 aa18.41■□□□□ 0.54
KDM1B-201ENST00000297792 E9PCH4 1651 aa18.4■□□□□ 0.54
KDM1B-201ENST00000297792 DUOX2Q9NRD8 1548 aa18.4■□□□□ 0.54
KDM1B-201ENST00000297792 FTSJ3Q8IY81 847 aaKnown RBP18.39■□□□□ 0.54
KDM1B-201ENST00000297792 PRDM15P57071 1507 aaPredicted RBP18.39■□□□□ 0.53
KDM1B-201ENST00000297792 CARD14Q9BXL6 1004 aa18.39■□□□□ 0.53
KDM1B-201ENST00000297792 SLC12A5Q9H2X9 1139 aa18.39■□□□□ 0.53
KDM1B-201ENST00000297792 MYO5CQ9NQX4 1742 aa18.38■□□□□ 0.53
KDM1B-201ENST00000297792 WDR7Q9Y4E6 1490 aa18.38■□□□□ 0.53
KDM1B-201ENST00000297792 U2SURPO15042 1029 aaKnown RBP18.38■□□□□ 0.53
KDM1B-201ENST00000297792 U2AF1L5P0DN76 240 aaPredicted RBP18.38■□□□□ 0.53
KDM1B-201ENST00000297792 MFAP1P55081 439 aaKnown RBP18.38■□□□□ 0.53
KDM1B-201ENST00000297792 U2AF1Q01081 240 aaKnown RBP eCLIP18.38■□□□□ 0.53
KDM1B-201ENST00000297792 WWC1Q8IX03 1113 aa18.38■□□□□ 0.53
KDM1B-201ENST00000297792 CGNL1Q0VF96 1302 aa18.37■□□□□ 0.53
KDM1B-201ENST00000297792 TCP11L2Q8N4U5 519 aa18.37■□□□□ 0.53
KDM1B-201ENST00000297792 UNC13BO14795 1591 aa18.37■□□□□ 0.53
KDM1B-201ENST00000297792 NKTRP30414 1462 aaKnown RBP18.36■□□□□ 0.53
KDM1B-201ENST00000297792 ZNF521Q96K83 1311 aa18.35■□□□□ 0.53
KDM1B-201ENST00000297792 ATP10AO60312 1499 aa18.35■□□□□ 0.53
KDM1B-201ENST00000297792 MAST1Q9Y2H9 1570 aa18.34■□□□□ 0.53
KDM1B-201ENST00000297792 RLBP1P12271 317 aa18.34■□□□□ 0.53
KDM1B-201ENST00000297792 CFAP65Q6ZU64 1925 aaKnown RBP18.34■□□□□ 0.53
KDM1B-201ENST00000297792 IQGAP3Q86VI3 1631 aa18.34■□□□□ 0.53
KDM1B-201ENST00000297792 PDZRN3Q9UPQ7 1066 aa18.34■□□□□ 0.53
KDM1B-201ENST00000297792 EIF3AQ14152 1382 aaKnown RBP18.34■□□□□ 0.53
KDM1B-201ENST00000297792 PCDHB15Q9Y5E8 787 aa18.33■□□□□ 0.52
KDM1B-201ENST00000297792 TSR2Q969E8 191 aaKnown RBP18.33■□□□□ 0.52
KDM1B-201ENST00000297792 MTHFSP49914 203 aa18.32■□□□□ 0.52
KDM1B-201ENST00000297792 KANK1Q14678 1352 aa18.32■□□□□ 0.52
KDM1B-201ENST00000297792 ZCCHC11Q5TAX3 1644 aaKnown RBP18.32■□□□□ 0.52
KDM1B-201ENST00000297792 MAPK8IP3Q9UPT6 1336 aa18.32■□□□□ 0.52
KDM1B-201ENST00000297792 ITPRIPQ8IWB1 547 aa18.3■□□□□ 0.52
KDM1B-201ENST00000297792 STK26Q9P289 416 aa18.3■□□□□ 0.52
KDM1B-201ENST00000297792 SCAF11Q99590 1463 aaKnown RBP18.29■□□□□ 0.52
KDM1B-201ENST00000297792 ASXL1Q8IXJ9 1541 aa18.29■□□□□ 0.52
KDM1B-201ENST00000297792 CFAP53Q96M91 514 aa18.29■□□□□ 0.52
KDM1B-201ENST00000297792 ABCC1P33527 1531 aa18.29■□□□□ 0.52
KDM1B-201ENST00000297792 PDE3AQ14432 1141 aa18.29■□□□□ 0.52
KDM1B-201ENST00000297792 SMC4Q9NTJ3 1288 aa18.29■□□□□ 0.52
KDM1B-201ENST00000297792 FANCAO15360 1455 aa18.29■□□□□ 0.52
KDM1B-201ENST00000297792 RARSP54136 660 aaKnown RBP18.28■□□□□ 0.52
KDM1B-201ENST00000297792 PMFBP1Q8TBY8 1022 aa18.28■□□□□ 0.52
KDM1B-201ENST00000297792 FOXD4L1Q9NU39 408 aa18.28■□□□□ 0.52
KDM1B-201ENST00000297792 PLXNC1O60486 1568 aa18.28■□□□□ 0.52
KDM1B-201ENST00000297792 RUNDC1Q96C34 613 aa18.27■□□□□ 0.52
KDM1B-201ENST00000297792 RWDD1Q9H446 243 aaPredicted RBP18.27■□□□□ 0.52
KDM1B-201ENST00000297792 CLTCL1P53675 1640 aa18.26■□□□□ 0.51
KDM1B-201ENST00000297792 RAPGEF3O95398 923 aa18.25■□□□□ 0.51
KDM1B-201ENST00000297792 TBC1D2Q9BYX2 928 aa18.25■□□□□ 0.51
KDM1B-201ENST00000297792 USP19O94966 1318 aa18.25■□□□□ 0.51
KDM1B-201ENST00000297792 HSP90AA1P07900 732 aaKnown RBP18.25■□□□□ 0.51
KDM1B-201ENST00000297792 EIF2AK4Q9P2K8 1649 aaKnown RBP18.24■□□□□ 0.51
KDM1B-201ENST00000297792 NSD3Q9BZ95 1437 aa18.24■□□□□ 0.51
KDM1B-201ENST00000297792 ADGRL1O94910 1474 aa18.24■□□□□ 0.51
KDM1B-201ENST00000297792 MADDQ8WXG6 1647 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms