RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 ZNF518AQ6AHZ1 1483 aa12.51□□□□□ -0.41
UBLCP1-201ENST00000296786 ABCA6Q8N139 1617 aa12.51□□□□□ -0.41
UBLCP1-201ENST00000296786 STAC3Q96MF2 364 aa12.51□□□□□ -0.41
UBLCP1-201ENST00000296786 KDM5AP29375 1690 aaKnown RBP12.5□□□□□ -0.41
UBLCP1-201ENST00000296786 MYOM2P54296 1465 aa12.47□□□□□ -0.41
UBLCP1-201ENST00000296786 ZMYM4Q5VZL5 1548 aa12.47□□□□□ -0.41
UBLCP1-201ENST00000296786 LMTK2Q8IWU2 1503 aa12.47□□□□□ -0.41
UBLCP1-201ENST00000296786 HECW2Q9P2P5 1572 aa12.46□□□□□ -0.41
UBLCP1-201ENST00000296786 NPM1P06748 294 aaKnown RBP eCLIP12.46□□□□□ -0.41
UBLCP1-201ENST00000296786 SALL2Q9Y467 1007 aaPredicted RBP12.46□□□□□ -0.41
UBLCP1-201ENST00000296786 EIF3AQ14152 1382 aaKnown RBP12.46□□□□□ -0.41
UBLCP1-201ENST00000296786 BLMP54132 1417 aaPredicted RBP12.46□□□□□ -0.41
UBLCP1-201ENST00000296786 PPLO60437 1756 aa12.46□□□□□ -0.42
UBLCP1-201ENST00000296786 FRMPD1Q5SYB0 1578 aa12.46□□□□□ -0.42
UBLCP1-201ENST00000296786 CD109Q6YHK3 1445 aa12.45□□□□□ -0.42
UBLCP1-201ENST00000296786 POGZQ7Z3K3 1410 aa12.45□□□□□ -0.42
UBLCP1-201ENST00000296786 INSRP06213 1382 aa12.45□□□□□ -0.42
UBLCP1-201ENST00000296786 CDCA8Q53HL2 280 aa12.44□□□□□ -0.42
UBLCP1-201ENST00000296786 OSCARQ8IYS5 282 aa12.44□□□□□ -0.42
UBLCP1-201ENST00000296786 KNSTRNQ9Y448 316 aa12.44□□□□□ -0.42
UBLCP1-201ENST00000296786 MYO3AQ8NEV4 1616 aa12.44□□□□□ -0.42
UBLCP1-201ENST00000296786 ADGRB3O60242 1522 aa12.44□□□□□ -0.42
UBLCP1-201ENST00000296786 ASXL1Q8IXJ9 1541 aa12.43□□□□□ -0.42
UBLCP1-201ENST00000296786 ADGRF5Q8IZF2 1346 aa12.43□□□□□ -0.42
UBLCP1-201ENST00000296786 PDE3BQ13370 1112 aa12.43□□□□□ -0.42
UBLCP1-201ENST00000296786 ANP32EQ9BTT0 268 aa12.43□□□□□ -0.42
UBLCP1-201ENST00000296786 MLH3Q9UHC1 1453 aa12.43□□□□□ -0.42
UBLCP1-201ENST00000296786 CFAP70Q5T0N1 1121 aa12.42□□□□□ -0.42
UBLCP1-201ENST00000296786 NRXN1Q9ULB1 1477 aa12.42□□□□□ -0.42
UBLCP1-201ENST00000296786 AMER1Q5JTC6 1135 aaPredicted RBP12.42□□□□□ -0.42
UBLCP1-201ENST00000296786 CCDC136Q96JN2 1154 aa12.42□□□□□ -0.42
UBLCP1-201ENST00000296786 ZC3H13Q5T200 1668 aaKnown RBP12.41□□□□□ -0.42
UBLCP1-201ENST00000296786 ERVK-7P63135 1459 aa12.41□□□□□ -0.42
UBLCP1-201ENST00000296786 RRP1P56182 461 aaKnown RBP12.41□□□□□ -0.42
UBLCP1-201ENST00000296786 RCAN3Q9UKA8 241 aa12.41□□□□□ -0.42
UBLCP1-201ENST00000296786 CAMSAP1Q5T5Y3 1602 aa12.4□□□□□ -0.42
UBLCP1-201ENST00000296786 SIGLEC1Q9BZZ2 1709 aa12.4□□□□□ -0.42
UBLCP1-201ENST00000296786 NPATQ14207 1427 aa12.4□□□□□ -0.42
UBLCP1-201ENST00000296786 PPP2R1AP30153 589 aa12.4□□□□□ -0.42
UBLCP1-201ENST00000296786 CDCA7LQ96GN5 454 aa12.4□□□□□ -0.42
UBLCP1-201ENST00000296786 SETBP1Q9Y6X0 1596 aa12.4□□□□□ -0.42
UBLCP1-201ENST00000296786 FANCIQ9NVI1 1328 aa12.4□□□□□ -0.42
UBLCP1-201ENST00000296786 NOS1P29475 1434 aa12.39□□□□□ -0.43
UBLCP1-201ENST00000296786 QRICH2Q9H0J4 1663 aa12.39□□□□□ -0.43
UBLCP1-201ENST00000296786 GGT6Q6P531 493 aa12.38□□□□□ -0.43
UBLCP1-201ENST00000296786 ADAMTS8Q9UP79 889 aa12.38□□□□□ -0.43
UBLCP1-201ENST00000296786 ABCC3O15438 1527 aa12.38□□□□□ -0.43
UBLCP1-201ENST00000296786 RICTORQ6R327 1708 aa12.38□□□□□ -0.43
UBLCP1-201ENST00000296786 NPC1L1Q9UHC9 1359 aa12.37□□□□□ -0.43
UBLCP1-201ENST00000296786 MSH5O43196 834 aa12.37□□□□□ -0.43
UBLCP1-201ENST00000296786 PIK3C2GO75747 1445 aa12.37□□□□□ -0.43
UBLCP1-201ENST00000296786 CHGAP10645 457 aaKnown RBP12.36□□□□□ -0.43
UBLCP1-201ENST00000296786 NEO1Q92859 1461 aa12.36□□□□□ -0.43
UBLCP1-201ENST00000296786 DIP2CQ9Y2E4 1556 aa12.36□□□□□ -0.43
UBLCP1-201ENST00000296786 SLC24A1O60721 1099 aa12.36□□□□□ -0.43
UBLCP1-201ENST00000296786 PIK3C2BO00750 1634 aa12.35□□□□□ -0.43
UBLCP1-201ENST00000296786 WDR43Q15061 677 aaKnown RBP eCLIP12.35□□□□□ -0.43
UBLCP1-201ENST00000296786 SBNO2Q9Y2G9 1366 aa12.35□□□□□ -0.43
UBLCP1-201ENST00000296786 MYO5BQ9ULV0 1848 aa12.35□□□□□ -0.43
UBLCP1-201ENST00000296786 EXOC6Q8TAG9 804 aa12.34□□□□□ -0.43
UBLCP1-201ENST00000296786 ADGRB1O14514 1584 aa12.34□□□□□ -0.43
UBLCP1-201ENST00000296786 RAPGEF3O95398 923 aa12.33□□□□□ -0.44
UBLCP1-201ENST00000296786 CENPJQ9HC77 1338 aaPredicted RBP12.33□□□□□ -0.44
UBLCP1-201ENST00000296786 PLEKHH1Q9ULM0 1364 aa12.33□□□□□ -0.44
UBLCP1-201ENST00000296786 ARHGEF28Q8N1W1 1705 aaKnown RBP12.32□□□□□ -0.44
UBLCP1-201ENST00000296786 GLI2P10070 1586 aa12.32□□□□□ -0.44
UBLCP1-201ENST00000296786 CARD14Q9BXL6 1004 aa12.31□□□□□ -0.44
UBLCP1-201ENST00000296786 C14orf93Q9H972 538 aaKnown RBP12.3□□□□□ -0.44
UBLCP1-201ENST00000296786 TRAK1Q9UPV9 953 aa12.3□□□□□ -0.44
UBLCP1-201ENST00000296786 NEXMIFQ5QGS0 1516 aa12.3□□□□□ -0.44
UBLCP1-201ENST00000296786 PLIN1O60240 522 aa12.3□□□□□ -0.44
UBLCP1-201ENST00000296786 RPGRIP1LQ68CZ1 1315 aa12.29□□□□□ -0.44
UBLCP1-201ENST00000296786 ZNF521Q96K83 1311 aa12.29□□□□□ -0.44
UBLCP1-201ENST00000296786 SHPRHQ149N8 1683 aa12.28□□□□□ -0.44
UBLCP1-201ENST00000296786 PREX1Q8TCU6 1659 aa12.28□□□□□ -0.44
UBLCP1-201ENST00000296786 TMEM132EQ6IEE7 984 aa12.28□□□□□ -0.44
UBLCP1-201ENST00000296786 USP32Q8NFA0 1604 aa12.27□□□□□ -0.44
UBLCP1-201ENST00000296786 DUSP27Q5VZP5 1158 aa12.27□□□□□ -0.44
UBLCP1-201ENST00000296786 CCDC146Q8IYE0 955 aa12.27□□□□□ -0.44
UBLCP1-201ENST00000296786 ARHGAP31Q2M1Z3 1444 aa12.26□□□□□ -0.45
UBLCP1-201ENST00000296786 NSD3Q9BZ95 1437 aa12.26□□□□□ -0.45
UBLCP1-201ENST00000296786 YEATS2Q9ULM3 1422 aa12.26□□□□□ -0.45
UBLCP1-201ENST00000296786 GOLGA2Q08379 1002 aa12.26□□□□□ -0.45
UBLCP1-201ENST00000296786 NUTM2DQ5VT03 806 aaPredicted RBP12.26□□□□□ -0.45
UBLCP1-201ENST00000296786 TSPOAP1O95153 1857 aa12.25□□□□□ -0.45
UBLCP1-201ENST00000296786 CRBNQ96SW2 442 aa12.25□□□□□ -0.45
UBLCP1-201ENST00000296786 ERICH6Q7L0X2 663 aa12.24□□□□□ -0.45
UBLCP1-201ENST00000296786 SLC12A5Q9H2X9 1139 aa12.24□□□□□ -0.45
UBLCP1-201ENST00000296786 TULP4Q9NRJ4 1543 aa12.24□□□□□ -0.45
UBLCP1-201ENST00000296786 TMEM131LA2VDJ0 1609 aa12.24□□□□□ -0.45
UBLCP1-201ENST00000296786 APAF1O14727 1248 aa12.23□□□□□ -0.45
UBLCP1-201ENST00000296786 VGFO15240 615 aaPredicted RBP12.23□□□□□ -0.45
UBLCP1-201ENST00000296786 POLR3AO14802 1390 aaPredicted RBP12.23□□□□□ -0.45
UBLCP1-201ENST00000296786 SLFN5Q08AF3 891 aa12.23□□□□□ -0.45
UBLCP1-201ENST00000296786 C20orf194Q5TEA3 1177 aa12.23□□□□□ -0.45
UBLCP1-201ENST00000296786 SENP3Q9H4L4 574 aaPredicted RBP12.22□□□□□ -0.45
UBLCP1-201ENST00000296786 IDI1Q13907 227 aa12.22□□□□□ -0.45
UBLCP1-201ENST00000296786 NKTRP30414 1462 aaKnown RBP12.21□□□□□ -0.45
UBLCP1-201ENST00000296786 MORC1Q86VD1 984 aa12.21□□□□□ -0.46
UBLCP1-201ENST00000296786 TRMT2AQ8IZ69 625 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms