RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 TMEM131LA2VDJ0 1609 aa17.85■□□□□ 0.45
HMGB2-201ENST00000296503 RIMS2Q9UQ26 1411 aa17.85■□□□□ 0.45
HMGB2-201ENST00000296503 MYO5BQ9ULV0 1848 aa17.84■□□□□ 0.45
HMGB2-201ENST00000296503 IQGAP1P46940 1657 aa17.84■□□□□ 0.45
HMGB2-201ENST00000296503 SLC26A8Q96RN1 970 aa17.82■□□□□ 0.44
HMGB2-201ENST00000296503 TRPM2O94759 1503 aa17.82■□□□□ 0.44
HMGB2-201ENST00000296503 LTBP4Q8N2S1 1624 aa17.81■□□□□ 0.44
HMGB2-201ENST00000296503 ILDR1Q86SU0 546 aaPredicted RBP17.81■□□□□ 0.44
HMGB2-201ENST00000296503 FBXO41Q8TF61 875 aa17.8■□□□□ 0.44
HMGB2-201ENST00000296503 ZFYVE9O95405 1425 aa17.8■□□□□ 0.44
HMGB2-201ENST00000296503 CLTCL1P53675 1640 aa17.79■□□□□ 0.44
HMGB2-201ENST00000296503 PLEKHG1Q9ULL1 1385 aa17.77■□□□□ 0.44
HMGB2-201ENST00000296503 KIF1BO60333 1816 aa17.77■□□□□ 0.43
HMGB2-201ENST00000296503 CCDC144AA2RUR9 1427 aa17.77■□□□□ 0.43
HMGB2-201ENST00000296503 TRIM26Q12899 539 aaPredicted RBP17.76■□□□□ 0.43
HMGB2-201ENST00000296503 RGL3Q3MIN7 710 aa17.75■□□□□ 0.43
HMGB2-201ENST00000296503 TBX22Q9Y458 520 aa17.73■□□□□ 0.43
HMGB2-201ENST00000296503 CPS1P31327 1500 aa17.73■□□□□ 0.43
HMGB2-201ENST00000296503 VGFO15240 615 aaPredicted RBP17.72■□□□□ 0.43
HMGB2-201ENST00000296503 KCNA6P17658 529 aa17.72■□□□□ 0.43
HMGB2-201ENST00000296503 RPGRIP1LQ68CZ1 1315 aa17.72■□□□□ 0.43
HMGB2-201ENST00000296503 UBAP1LF5GYI3 381 aa17.69■□□□□ 0.42
HMGB2-201ENST00000296503 IQSEC2Q5JU85 1478 aa17.69■□□□□ 0.42
HMGB2-201ENST00000296503 PROSER2Q86WR7 435 aaPredicted RBP17.69■□□□□ 0.42
HMGB2-201ENST00000296503 ANKRD30BQ9BXX2 1392 aa17.67■□□□□ 0.42
HMGB2-201ENST00000296503 STRCP1A6NGW2 1772 aa17.67■□□□□ 0.42
HMGB2-201ENST00000296503 NEXMIFQ5QGS0 1516 aa17.67■□□□□ 0.42
HMGB2-201ENST00000296503 ADAMTS13Q76LX8 1427 aa17.67■□□□□ 0.42
HMGB2-201ENST00000296503 LRRC7Q96NW7 1537 aa17.65■□□□□ 0.42
HMGB2-201ENST00000296503 TOM1O60784 492 aa17.65■□□□□ 0.42
HMGB2-201ENST00000296503 RBM33Q96EV2 1170 aaKnown RBP17.65■□□□□ 0.42
HMGB2-201ENST00000296503 SPATA31E1Q6ZUB1 1445 aa17.64■□□□□ 0.42
HMGB2-201ENST00000296503 AMOTL2Q9Y2J4 779 aa17.63■□□□□ 0.41
HMGB2-201ENST00000296503 PIK3R4Q99570 1358 aa17.62■□□□□ 0.41
HMGB2-201ENST00000296503 DIP2AQ14689 1571 aa17.62■□□□□ 0.41
HMGB2-201ENST00000296503 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
HMGB2-201ENST00000296503 TMEM94Q12767 1356 aa17.61■□□□□ 0.41
HMGB2-201ENST00000296503 ADGRF5Q8IZF2 1346 aa17.61■□□□□ 0.41
HMGB2-201ENST00000296503 PIP4K2BP78356 416 aa17.61■□□□□ 0.41
HMGB2-201ENST00000296503 CHD2O14647 1828 aaKnown RBP17.6■□□□□ 0.41
HMGB2-201ENST00000296503 SETBP1Q9Y6X0 1596 aa17.6■□□□□ 0.41
HMGB2-201ENST00000296503 PELP1Q8IZL8 1130 aaKnown RBP17.6■□□□□ 0.41
HMGB2-201ENST00000296503 PPLO60437 1756 aa17.59■□□□□ 0.41
HMGB2-201ENST00000296503 METP08581 1390 aa17.59■□□□□ 0.41
HMGB2-201ENST00000296503 C14orf37Q86TY3 774 aa17.58■□□□□ 0.41
HMGB2-201ENST00000296503 NRXN3Q9Y4C0 1643 aa17.58■□□□□ 0.4
HMGB2-201ENST00000296503 PTPRUQ92729 1446 aa17.57■□□□□ 0.4
HMGB2-201ENST00000296503 KDM2AQ9Y2K7 1162 aa17.57■□□□□ 0.4
HMGB2-201ENST00000296503 NKTRP30414 1462 aaKnown RBP17.57■□□□□ 0.4
HMGB2-201ENST00000296503 NWD1Q149M9 1564 aa17.57■□□□□ 0.4
HMGB2-201ENST00000296503 DCAF11Q8TEB1 546 aa17.56■□□□□ 0.4
HMGB2-201ENST00000296503 ALKQ9UM73 1620 aa17.54■□□□□ 0.4
HMGB2-201ENST00000296503 XIRP1Q702N8 1843 aaKnown RBP17.53■□□□□ 0.4
HMGB2-201ENST00000296503 MSH6P52701 1360 aa17.53■□□□□ 0.4
HMGB2-201ENST00000296503 IFT172Q9UG01 1749 aa17.52■□□□□ 0.39
HMGB2-201ENST00000296503 TMEM132EQ6IEE7 984 aa17.51■□□□□ 0.39
HMGB2-201ENST00000296503 SIN3AQ96ST3 1273 aa17.51■□□□□ 0.39
HMGB2-201ENST00000296503 PCGF6Q9BYE7 350 aa17.51■□□□□ 0.39
HMGB2-201ENST00000296503 STK26Q9P289 416 aa17.51■□□□□ 0.39
HMGB2-201ENST00000296503 NEUROD1Q13562 356 aa17.5■□□□□ 0.39
HMGB2-201ENST00000296503 CFAP70Q5T0N1 1121 aa17.5■□□□□ 0.39
HMGB2-201ENST00000296503 STAC3Q96MF2 364 aa17.5■□□□□ 0.39
HMGB2-201ENST00000296503 C19orf44Q9H6X5 657 aa17.5■□□□□ 0.39
HMGB2-201ENST00000296503 C14orf93Q9H972 538 aaKnown RBP17.5■□□□□ 0.39
HMGB2-201ENST00000296503 NCOA3Q9Y6Q9 1424 aa17.5■□□□□ 0.39
HMGB2-201ENST00000296503 DHX57Q6P158 1386 aaKnown RBP17.5■□□□□ 0.39
HMGB2-201ENST00000296503 PIK3C2GO75747 1445 aa17.49■□□□□ 0.39
HMGB2-201ENST00000296503 ATF3P18847 181 aa17.48■□□□□ 0.39
HMGB2-201ENST00000296503 MYOM2P54296 1465 aa17.48■□□□□ 0.39
HMGB2-201ENST00000296503 SLAIN2Q9P270 581 aa17.47■□□□□ 0.39
HMGB2-201ENST00000296503 CADPS2Q86UW7 1296 aa17.46■□□□□ 0.39
HMGB2-201ENST00000296503 SETD1AO15047 1707 aaKnown RBP17.46■□□□□ 0.39
HMGB2-201ENST00000296503 XRN1Q8IZH2 1706 aaKnown RBP17.46■□□□□ 0.39
HMGB2-201ENST00000296503 HSPA1LP34931 641 aa17.45■□□□□ 0.38
HMGB2-201ENST00000296503 NRXN1Q9ULB1 1477 aa17.45■□□□□ 0.38
HMGB2-201ENST00000296503 ROBO2Q9HCK4 1378 aa17.44■□□□□ 0.38
HMGB2-201ENST00000296503 LRPPRCP42704 1394 aaKnown RBP17.43■□□□□ 0.38
HMGB2-201ENST00000296503 WAPLQ7Z5K2 1190 aa17.42■□□□□ 0.38
HMGB2-201ENST00000296503 L3MBTL2Q969R5 705 aa17.42■□□□□ 0.38
HMGB2-201ENST00000296503 PTCH1Q13635 1447 aa17.41■□□□□ 0.38
HMGB2-201ENST00000296503 ABCC11Q96J66 1382 aa17.41■□□□□ 0.38
HMGB2-201ENST00000296503 YTHDC2Q9H6S0 1430 aaKnown RBP17.41■□□□□ 0.38
HMGB2-201ENST00000296503 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.41■□□□□ 0.38
HMGB2-201ENST00000296503 FAM135BQ49AJ0 1406 aa17.4■□□□□ 0.38
HMGB2-201ENST00000296503 ADGRL3Q9HAR2 1447 aa17.38■□□□□ 0.37
HMGB2-201ENST00000296503 TRAK1Q9UPV9 953 aa17.38■□□□□ 0.37
HMGB2-201ENST00000296503 ASXL1Q8IXJ9 1541 aa17.38■□□□□ 0.37
HMGB2-201ENST00000296503 SIRT1Q96EB6 747 aa17.37■□□□□ 0.37
HMGB2-201ENST00000296503 LAMC1P11047 1609 aa17.37■□□□□ 0.37
HMGB2-201ENST00000296503 POGKQ9P215 609 aa17.37■□□□□ 0.37
HMGB2-201ENST00000296503 PRAG1Q86YV5 1406 aa17.36■□□□□ 0.37
HMGB2-201ENST00000296503 TECPR2O15040 1411 aa17.36■□□□□ 0.37
HMGB2-201ENST00000296503 DCCP43146 1447 aa17.36■□□□□ 0.37
HMGB2-201ENST00000296503 SAFB2Q14151 953 aaKnown RBP eCLIP17.35■□□□□ 0.37
HMGB2-201ENST00000296503 PRAM1Q96QH2 718 aa17.35■□□□□ 0.37
HMGB2-201ENST00000296503 PLEKHH1Q9ULM0 1364 aa17.35■□□□□ 0.37
HMGB2-201ENST00000296503 ROBO1Q9Y6N7 1651 aa17.34■□□□□ 0.37
HMGB2-201ENST00000296503 NBPF1Q3BBV0 1214 aa17.33■□□□□ 0.36
HMGB2-201ENST00000296503 NALCNQ8IZF0 1738 aa17.32■□□□□ 0.36
HMGB2-201ENST00000296503 BRINP3Q76B58 766 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms