RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 ERBINQ96RT1 1412 aa18.1■□□□□ 0.49
FUBP1-201ENST00000294623 NPC1L1Q9UHC9 1359 aa18.1■□□□□ 0.49
FUBP1-201ENST00000294623 TBC1D2Q9BYX2 928 aa18.1■□□□□ 0.49
FUBP1-201ENST00000294623 SKOR2Q2VWA4 1001 aaPredicted RBP18.09■□□□□ 0.49
FUBP1-201ENST00000294623 E9PSI1 815 aa18.08■□□□□ 0.49
FUBP1-201ENST00000294623 PBRM1Q86U86 1689 aa18.08■□□□□ 0.49
FUBP1-201ENST00000294623 MTERF4Q7Z6M4 381 aaKnown RBP18.08■□□□□ 0.48
FUBP1-201ENST00000294623 CLUAP1Q96AJ1 413 aa18.07■□□□□ 0.48
FUBP1-201ENST00000294623 ADAMTS8Q9UP79 889 aa18.07■□□□□ 0.48
FUBP1-201ENST00000294623 URB2Q14146 1524 aaKnown RBP18.07■□□□□ 0.48
FUBP1-201ENST00000294623 NUP153P49790 1475 aaKnown RBP18.07■□□□□ 0.48
FUBP1-201ENST00000294623 SYNMO15061 1565 aa18.07■□□□□ 0.48
FUBP1-201ENST00000294623 ADAMTS12P58397 1594 aa18.07■□□□□ 0.48
FUBP1-201ENST00000294623 GPATCH8Q9UKJ3 1502 aaKnown RBP18.07■□□□□ 0.48
FUBP1-201ENST00000294623 KIAA0556O60303 1618 aa18.07■□□□□ 0.48
FUBP1-201ENST00000294623 RNF17Q9BXT8 1623 aaKnown RBP18.07■□□□□ 0.48
FUBP1-201ENST00000294623 TMF1P82094 1093 aa18.06■□□□□ 0.48
FUBP1-201ENST00000294623 PODXL2Q9NZ53 605 aa18.06■□□□□ 0.48
FUBP1-201ENST00000294623 CIZ1Q9ULV3 898 aaPredicted RBP18.06■□□□□ 0.48
FUBP1-201ENST00000294623 NUP155O75694 1391 aa18.06■□□□□ 0.48
FUBP1-201ENST00000294623 PANK2Q9BZ23 570 aa18.06■□□□□ 0.48
FUBP1-201ENST00000294623 CCDC141Q6ZP82 1450 aa18.05■□□□□ 0.48
FUBP1-201ENST00000294623 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.05■□□□□ 0.48
FUBP1-201ENST00000294623 NCOA3Q9Y6Q9 1424 aa18.05■□□□□ 0.48
FUBP1-201ENST00000294623 CCDC173Q0VFZ6 552 aa18.04■□□□□ 0.48
FUBP1-201ENST00000294623 ZNF644Q9H582 1327 aaPredicted RBP18.03■□□□□ 0.48
FUBP1-201ENST00000294623 PANK3Q9H999 370 aa18.03■□□□□ 0.48
FUBP1-201ENST00000294623 CDC42BPAQ5VT25 1732 aa18.03■□□□□ 0.48
FUBP1-201ENST00000294623 IGHDP01880 384 aa18.02■□□□□ 0.48
FUBP1-201ENST00000294623 TESK2Q96S53 571 aa18.02■□□□□ 0.48
FUBP1-201ENST00000294623 CFDP1Q9UEE9 299 aaPredicted RBP18.02■□□□□ 0.48
FUBP1-201ENST00000294623 IBTKQ9P2D0 1353 aaPredicted RBP18.02■□□□□ 0.48
FUBP1-201ENST00000294623 ARHGEF5Q12774 1597 aa18.02■□□□□ 0.47
FUBP1-201ENST00000294623 CC2D1BQ5T0F9 858 aaKnown RBP18.02■□□□□ 0.47
FUBP1-201ENST00000294623 TARBP1Q13395 1621 aaKnown RBP18.02■□□□□ 0.47
FUBP1-201ENST00000294623 TDRD9Q8NDG6 1382 aaKnown RBP18.01■□□□□ 0.47
FUBP1-201ENST00000294623 SEC24BO95487 1268 aa18.01■□□□□ 0.47
FUBP1-201ENST00000294623 HS1BP3Q53T59 392 aa18.01■□□□□ 0.47
FUBP1-201ENST00000294623 PPP1R9BQ96SB3 815 aa18.01■□□□□ 0.47
FUBP1-201ENST00000294623 ASXL1Q8IXJ9 1541 aa18.01■□□□□ 0.47
FUBP1-201ENST00000294623 DISP3Q9P2K9 1392 aa18.01■□□□□ 0.47
FUBP1-201ENST00000294623 SYNJ2O15056 1496 aa18.01■□□□□ 0.47
FUBP1-201ENST00000294623 OFD1O75665 1012 aa18■□□□□ 0.47
FUBP1-201ENST00000294623 PPP2R1AP30153 589 aa18■□□□□ 0.47
FUBP1-201ENST00000294623 C9orf84Q5VXU9 1444 aa18■□□□□ 0.47
FUBP1-201ENST00000294623 GBP4Q96PP9 640 aa17.99■□□□□ 0.47
FUBP1-201ENST00000294623 CDCA8Q53HL2 280 aa17.99■□□□□ 0.47
FUBP1-201ENST00000294623 SHROOM2Q13796 1616 aa17.98■□□□□ 0.47
FUBP1-201ENST00000294623 ZSCAN30Q86W11 494 aa17.98■□□□□ 0.47
FUBP1-201ENST00000294623 RTEL1-TNFRSF6BF6WH68 1400 aa17.98■□□□□ 0.47
FUBP1-201ENST00000294623 WDR7Q9Y4E6 1490 aa17.98■□□□□ 0.47
FUBP1-201ENST00000294623 MYO5CQ9NQX4 1742 aa17.98■□□□□ 0.47
FUBP1-201ENST00000294623 ERBB4Q15303 1308 aa17.97■□□□□ 0.47
FUBP1-201ENST00000294623 HSCBQ8IWL3 235 aa17.97■□□□□ 0.47
FUBP1-201ENST00000294623 ANP32BQ92688 251 aaKnown RBP17.97■□□□□ 0.47
FUBP1-201ENST00000294623 FAM135AQ9P2D6 1515 aa17.97■□□□□ 0.47
FUBP1-201ENST00000294623 KDM2AQ9Y2K7 1162 aa17.96■□□□□ 0.47
FUBP1-201ENST00000294623 KIAA1211Q6ZU35 1233 aa17.96■□□□□ 0.47
FUBP1-201ENST00000294623 SMAP1Q8IYB5 467 aaPredicted RBP17.96■□□□□ 0.47
FUBP1-201ENST00000294623 SNX21Q969T3 373 aa17.96■□□□□ 0.47
FUBP1-201ENST00000294623 RWDD1Q9H446 243 aaPredicted RBP17.96■□□□□ 0.47
FUBP1-201ENST00000294623 KNSTRNQ9Y448 316 aa17.95■□□□□ 0.46
FUBP1-201ENST00000294623 UNC13BO14795 1591 aa17.95■□□□□ 0.46
FUBP1-201ENST00000294623 A2MP01023 1474 aa17.95■□□□□ 0.46
FUBP1-201ENST00000294623 DDIT3P35638 169 aa17.95■□□□□ 0.46
FUBP1-201ENST00000294623 PRDM4Q9UKN5 801 aa17.95■□□□□ 0.46
FUBP1-201ENST00000294623 IQGAP1P46940 1657 aa17.94■□□□□ 0.46
FUBP1-201ENST00000294623 ARHGAP31Q2M1Z3 1444 aa17.94■□□□□ 0.46
FUBP1-201ENST00000294623 DISP1Q96F81 1524 aa17.94■□□□□ 0.46
FUBP1-201ENST00000294623 ZNF692Q9BU19 519 aaPredicted RBP17.94■□□□□ 0.46
FUBP1-201ENST00000294623 GZF1Q9H116 711 aaPredicted RBP17.94■□□□□ 0.46
FUBP1-201ENST00000294623 ATP10AO60312 1499 aa17.93■□□□□ 0.46
FUBP1-201ENST00000294623 C22orf23Q9BZE7 217 aa17.93■□□□□ 0.46
FUBP1-201ENST00000294623 MAGI2Q86UL8 1455 aa17.92■□□□□ 0.46
FUBP1-201ENST00000294623 NCBP3Q53F19 620 aaKnown RBP17.92■□□□□ 0.46
FUBP1-201ENST00000294623 SMC5Q8IY18 1101 aa17.92■□□□□ 0.46
FUBP1-201ENST00000294623 MSNP26038 577 aaKnown RBP17.91■□□□□ 0.46
FUBP1-201ENST00000294623 CANXP27824 592 aaKnown RBP17.91■□□□□ 0.46
FUBP1-201ENST00000294623 AMER1Q5JTC6 1135 aaPredicted RBP17.91■□□□□ 0.46
FUBP1-201ENST00000294623 SLC24A1O60721 1099 aa17.9■□□□□ 0.46
FUBP1-201ENST00000294623 BCAR3O75815 825 aa17.9■□□□□ 0.46
FUBP1-201ENST00000294623 GRIN2AQ12879 1464 aa17.89■□□□□ 0.45
FUBP1-201ENST00000294623 MCM5P33992 734 aa17.89■□□□□ 0.45
FUBP1-201ENST00000294623 CSPP1Q1MSJ5 1256 aa17.89■□□□□ 0.45
FUBP1-201ENST00000294623 PDZRN3Q9UPQ7 1066 aa17.89■□□□□ 0.45
FUBP1-201ENST00000294623 CLEC17AQ6ZS10 378 aa17.88■□□□□ 0.45
FUBP1-201ENST00000294623 PRG4Q92954 1404 aaPredicted RBP17.88■□□□□ 0.45
FUBP1-201ENST00000294623 STAC3Q96MF2 364 aa17.88■□□□□ 0.45
FUBP1-201ENST00000294623 KANK1Q14678 1352 aa17.87■□□□□ 0.45
FUBP1-201ENST00000294623 GOLGA6L22H0YM25 854 aa17.87■□□□□ 0.45
FUBP1-201ENST00000294623 ZNF500O60304 480 aaPredicted RBP17.87■□□□□ 0.45
FUBP1-201ENST00000294623 NCLP19338 710 aaKnown RBP17.87■□□□□ 0.45
FUBP1-201ENST00000294623 RAB3GAP1Q15042 981 aa17.87■□□□□ 0.45
FUBP1-201ENST00000294623 ARXQ96QS3 562 aa17.87■□□□□ 0.45
FUBP1-201ENST00000294623 IQGAP3Q86VI3 1631 aa17.87■□□□□ 0.45
FUBP1-201ENST00000294623 MAST1Q9Y2H9 1570 aa17.86■□□□□ 0.45
FUBP1-201ENST00000294623 DYNC1I1O14576 645 aa17.86■□□□□ 0.45
FUBP1-201ENST00000294623 RBM25P49756 843 aaKnown RBP17.86■□□□□ 0.45
FUBP1-201ENST00000294623 UTP14CQ5TAP6 766 aaKnown RBP17.86■□□□□ 0.45
FUBP1-201ENST00000294623 MYOM1P52179 1685 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms