RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 NEURL4Q96JN8 1562 aa18.92■□□□□ 0.62
NXF1-201ENST00000294172 EIF3AQ14152 1382 aaKnown RBP18.91■□□□□ 0.62
NXF1-201ENST00000294172 MYOM2P54296 1465 aa18.9■□□□□ 0.62
NXF1-201ENST00000294172 FAM69CQ0P6D2 419 aa18.9■□□□□ 0.62
NXF1-201ENST00000294172 CDCA8Q53HL2 280 aa18.9■□□□□ 0.62
NXF1-201ENST00000294172 MAP3K4Q9Y6R4 1608 aa18.9■□□□□ 0.62
NXF1-201ENST00000294172 ABCC3O15438 1527 aa18.89■□□□□ 0.61
NXF1-201ENST00000294172 MROH2AA6NES4 1674 aa18.89■□□□□ 0.61
NXF1-201ENST00000294172 NOS1P29475 1434 aa18.89■□□□□ 0.61
NXF1-201ENST00000294172 DIP2CQ9Y2E4 1556 aa18.88■□□□□ 0.61
NXF1-201ENST00000294172 LRPPRCP42704 1394 aaKnown RBP18.88■□□□□ 0.61
NXF1-201ENST00000294172 YEATS2Q9ULM3 1422 aa18.87■□□□□ 0.61
NXF1-201ENST00000294172 RIMBP3CA6NJZ7 1639 aa18.87■□□□□ 0.61
NXF1-201ENST00000294172 RIMBP3BA6NNM3 1639 aa18.87■□□□□ 0.61
NXF1-201ENST00000294172 RIMBP3Q9UFD9 1639 aa18.87■□□□□ 0.61
NXF1-201ENST00000294172 KNSTRNQ9Y448 316 aa18.86■□□□□ 0.61
NXF1-201ENST00000294172 KIAA1210Q9ULL0 1709 aa18.86■□□□□ 0.61
NXF1-201ENST00000294172 ADGRB3O60242 1522 aa18.86■□□□□ 0.61
NXF1-201ENST00000294172 RICTORQ6R327 1708 aa18.85■□□□□ 0.61
NXF1-201ENST00000294172 TSHZ2Q9NRE2 1034 aa18.83■□□□□ 0.61
NXF1-201ENST00000294172 IFT172Q9UG01 1749 aa18.83■□□□□ 0.61
NXF1-201ENST00000294172 GLI2P10070 1586 aa18.83■□□□□ 0.6
NXF1-201ENST00000294172 SMG6Q86US8 1419 aaKnown RBP18.83■□□□□ 0.6
NXF1-201ENST00000294172 NUDCQ9Y266 331 aa18.83■□□□□ 0.6
NXF1-201ENST00000294172 NRXN1Q9ULB1 1477 aa18.82■□□□□ 0.6
NXF1-201ENST00000294172 NUTM2DQ5VT03 806 aaPredicted RBP18.82■□□□□ 0.6
NXF1-201ENST00000294172 CAMSAP1Q5T5Y3 1602 aa18.82■□□□□ 0.6
NXF1-201ENST00000294172 SALL2Q9Y467 1007 aaPredicted RBP18.81■□□□□ 0.6
NXF1-201ENST00000294172 TRAK1Q9UPV9 953 aa18.8■□□□□ 0.6
NXF1-201ENST00000294172 RPGRIP1LQ68CZ1 1315 aa18.79■□□□□ 0.6
NXF1-201ENST00000294172 SLC24A1O60721 1099 aa18.79■□□□□ 0.6
NXF1-201ENST00000294172 TMEM132EQ6IEE7 984 aa18.79■□□□□ 0.6
NXF1-201ENST00000294172 C14orf93Q9H972 538 aaKnown RBP18.79■□□□□ 0.6
NXF1-201ENST00000294172 AMER1Q5JTC6 1135 aaPredicted RBP18.78■□□□□ 0.6
NXF1-201ENST00000294172 SYNMO15061 1565 aa18.78■□□□□ 0.6
NXF1-201ENST00000294172 PIK3C2GO75747 1445 aa18.78■□□□□ 0.6
NXF1-201ENST00000294172 SIGLEC1Q9BZZ2 1709 aa18.77■□□□□ 0.6
NXF1-201ENST00000294172 IDI1Q13907 227 aa18.77■□□□□ 0.59
NXF1-201ENST00000294172 ERICH6BQ5W0A0 696 aa18.77■□□□□ 0.59
NXF1-201ENST00000294172 CENPJQ9HC77 1338 aaPredicted RBP18.76■□□□□ 0.59
NXF1-201ENST00000294172 ERVK-7P63135 1459 aa18.76■□□□□ 0.59
NXF1-201ENST00000294172 DIP2BQ9P265 1576 aa18.76■□□□□ 0.59
NXF1-201ENST00000294172 PPLO60437 1756 aa18.76■□□□□ 0.59
NXF1-201ENST00000294172 TSPOAP1O95153 1857 aa18.76■□□□□ 0.59
NXF1-201ENST00000294172 SENP3Q9H4L4 574 aaPredicted RBP18.75■□□□□ 0.59
NXF1-201ENST00000294172 KDM5AP29375 1690 aaKnown RBP18.75■□□□□ 0.59
NXF1-201ENST00000294172 PPP2R1AP30153 589 aa18.74■□□□□ 0.59
NXF1-201ENST00000294172 ARHGAP31Q2M1Z3 1444 aa18.74■□□□□ 0.59
NXF1-201ENST00000294172 VGFO15240 615 aaPredicted RBP18.74■□□□□ 0.59
NXF1-201ENST00000294172 PPP4R2Q9NY27 417 aa18.74■□□□□ 0.59
NXF1-201ENST00000294172 SETBP1Q9Y6X0 1596 aa18.73■□□□□ 0.59
NXF1-201ENST00000294172 ASXL1Q8IXJ9 1541 aa18.72■□□□□ 0.59
NXF1-201ENST00000294172 MYOM1P52179 1685 aa18.72■□□□□ 0.59
NXF1-201ENST00000294172 SLC52A1Q9NWF4 448 aa18.72■□□□□ 0.59
NXF1-201ENST00000294172 ZC3H13Q5T200 1668 aaKnown RBP18.71■□□□□ 0.59
NXF1-201ENST00000294172 PIK3C2BO00750 1634 aa18.71■□□□□ 0.59
NXF1-201ENST00000294172 FBXO31Q5XUX0 539 aaPredicted RBP18.7■□□□□ 0.58
NXF1-201ENST00000294172 ADGRB1O14514 1584 aa18.69■□□□□ 0.58
NXF1-201ENST00000294172 SBNO2Q9Y2G9 1366 aa18.69■□□□□ 0.58
NXF1-201ENST00000294172 ZMYM4Q5VZL5 1548 aa18.69■□□□□ 0.58
NXF1-201ENST00000294172 CARD14Q9BXL6 1004 aa18.69■□□□□ 0.58
NXF1-201ENST00000294172 ADAMTS8Q9UP79 889 aa18.69■□□□□ 0.58
NXF1-201ENST00000294172 WDR43Q15061 677 aaKnown RBP eCLIP18.68■□□□□ 0.58
NXF1-201ENST00000294172 NEXMIFQ5QGS0 1516 aa18.67■□□□□ 0.58
NXF1-201ENST00000294172 MYO3AQ8NEV4 1616 aa18.67■□□□□ 0.58
NXF1-201ENST00000294172 B4GALNT3Q6L9W6 998 aa18.67■□□□□ 0.58
NXF1-201ENST00000294172 BLMP54132 1417 aaPredicted RBP18.66■□□□□ 0.58
NXF1-201ENST00000294172 NPC1L1Q9UHC9 1359 aa18.66■□□□□ 0.58
NXF1-201ENST00000294172 MLECQ14165 292 aa18.66■□□□□ 0.58
NXF1-201ENST00000294172 RNF123Q5XPI4 1314 aa18.65■□□□□ 0.58
NXF1-201ENST00000294172 PDE3BQ13370 1112 aa18.65■□□□□ 0.58
NXF1-201ENST00000294172 CDCA7LQ96GN5 454 aa18.65■□□□□ 0.58
NXF1-201ENST00000294172 SLC12A5Q9H2X9 1139 aa18.64■□□□□ 0.57
NXF1-201ENST00000294172 STK26Q9P289 416 aa18.64■□□□□ 0.57
NXF1-201ENST00000294172 STAG3Q9UJ98 1225 aa18.64■□□□□ 0.57
NXF1-201ENST00000294172 INSRP06213 1382 aa18.64■□□□□ 0.57
NXF1-201ENST00000294172 PREX1Q8TCU6 1659 aa18.63■□□□□ 0.57
NXF1-201ENST00000294172 QRICH2Q9H0J4 1663 aa18.63■□□□□ 0.57
NXF1-201ENST00000294172 SAFB2Q14151 953 aaKnown RBP eCLIP18.63■□□□□ 0.57
NXF1-201ENST00000294172 MYT1Q01538 1121 aa18.62■□□□□ 0.57
NXF1-201ENST00000294172 RCAN3Q9UKA8 241 aa18.61■□□□□ 0.57
NXF1-201ENST00000294172 EVC2Q86UK5 1308 aa18.59■□□□□ 0.57
NXF1-201ENST00000294172 MYO5BQ9ULV0 1848 aa18.59■□□□□ 0.57
NXF1-201ENST00000294172 ZFYVE9O95405 1425 aa18.59■□□□□ 0.57
NXF1-201ENST00000294172 NSD3Q9BZ95 1437 aa18.59■□□□□ 0.57
NXF1-201ENST00000294172 TMEM131LA2VDJ0 1609 aa18.58■□□□□ 0.57
NXF1-201ENST00000294172 PPP6R1Q9UPN7 881 aa18.57■□□□□ 0.56
NXF1-201ENST00000294172 TNNT2P45379 298 aaPredicted RBP18.57■□□□□ 0.56
NXF1-201ENST00000294172 CABP2Q9NPB3 220 aa18.57■□□□□ 0.56
NXF1-201ENST00000294172 RRP1P56182 461 aaKnown RBP18.56■□□□□ 0.56
NXF1-201ENST00000294172 AGLP35573 1532 aa18.56■□□□□ 0.56
NXF1-201ENST00000294172 MORC1Q86VD1 984 aa18.56■□□□□ 0.56
NXF1-201ENST00000294172 CCDC146Q8IYE0 955 aa18.56■□□□□ 0.56
NXF1-201ENST00000294172 REREQ9P2R6 1566 aa18.55■□□□□ 0.56
NXF1-201ENST00000294172 RBM19Q9Y4C8 960 aaKnown RBP18.55■□□□□ 0.56
NXF1-201ENST00000294172 ARHGEF28Q8N1W1 1705 aaKnown RBP18.54■□□□□ 0.56
NXF1-201ENST00000294172 CLTCQ00610 1675 aaKnown RBP18.54■□□□□ 0.56
NXF1-201ENST00000294172 CCDC136Q96JN2 1154 aa18.54■□□□□ 0.56
NXF1-201ENST00000294172 PLEKHH1Q9ULM0 1364 aa18.52■□□□□ 0.56
NXF1-201ENST00000294172 SRPK2P78362 688 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms