RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 CDCA8Q53HL2 280 aa21.05■□□□□ 0.96
NCKIPSD-201ENST00000294129 PPP2R1AP30153 589 aa21.04■□□□□ 0.96
NCKIPSD-201ENST00000294129 RRP1P56182 461 aaKnown RBP21.04■□□□□ 0.96
NCKIPSD-201ENST00000294129 KIDINS220Q9ULH0 1771 aa21.04■□□□□ 0.96
NCKIPSD-201ENST00000294129 IQGAP1P46940 1657 aa21.03■□□□□ 0.96
NCKIPSD-201ENST00000294129 WDR43Q15061 677 aaKnown RBP eCLIP21.03■□□□□ 0.96
NCKIPSD-201ENST00000294129 MSH5O43196 834 aa21.03■□□□□ 0.96
NCKIPSD-201ENST00000294129 EXOC6Q8TAG9 804 aa21.03■□□□□ 0.96
NCKIPSD-201ENST00000294129 MROH1Q8NDA8 1641 aa21.02■□□□□ 0.96
NCKIPSD-201ENST00000294129 PLIN1O60240 522 aa21.02■□□□□ 0.96
NCKIPSD-201ENST00000294129 AMER1Q5JTC6 1135 aaPredicted RBP21.02■□□□□ 0.96
NCKIPSD-201ENST00000294129 ZNF518AQ6AHZ1 1483 aa21.02■□□□□ 0.96
NCKIPSD-201ENST00000294129 EIF3AQ14152 1382 aaKnown RBP21.02■□□□□ 0.96
NCKIPSD-201ENST00000294129 TRAK1Q9UPV9 953 aa21.01■□□□□ 0.95
NCKIPSD-201ENST00000294129 VWDEQ8N2E2 1590 aa21.01■□□□□ 0.95
NCKIPSD-201ENST00000294129 STAC3Q96MF2 364 aa20.99■□□□□ 0.95
NCKIPSD-201ENST00000294129 TMEM132EQ6IEE7 984 aa20.99■□□□□ 0.95
NCKIPSD-201ENST00000294129 PPRC1Q5VV67 1664 aaKnown RBP20.98■□□□□ 0.95
NCKIPSD-201ENST00000294129 NOS1P29475 1434 aa20.98■□□□□ 0.95
NCKIPSD-201ENST00000294129 CCDC146Q8IYE0 955 aa20.97■□□□□ 0.95
NCKIPSD-201ENST00000294129 EFCAB6Q5THR3 1501 aa20.97■□□□□ 0.95
NCKIPSD-201ENST00000294129 KIF1BO60333 1816 aa20.96■□□□□ 0.95
NCKIPSD-201ENST00000294129 PDE3BQ13370 1112 aa20.96■□□□□ 0.95
NCKIPSD-201ENST00000294129 ABCA6Q8N139 1617 aa20.95■□□□□ 0.94
NCKIPSD-201ENST00000294129 TNNT2P45379 298 aaPredicted RBP20.94■□□□□ 0.94
NCKIPSD-201ENST00000294129 MROH2AA6NES4 1674 aa20.94■□□□□ 0.94
NCKIPSD-201ENST00000294129 POGZQ7Z3K3 1410 aa20.94■□□□□ 0.94
NCKIPSD-201ENST00000294129 MAP3K4Q9Y6R4 1608 aa20.94■□□□□ 0.94
NCKIPSD-201ENST00000294129 ERICH6Q7L0X2 663 aa20.93■□□□□ 0.94
NCKIPSD-201ENST00000294129 BLMP54132 1417 aaPredicted RBP20.93■□□□□ 0.94
NCKIPSD-201ENST00000294129 NPATQ14207 1427 aa20.93■□□□□ 0.94
NCKIPSD-201ENST00000294129 ASXL1Q8IXJ9 1541 aa20.91■□□□□ 0.94
NCKIPSD-201ENST00000294129 CARD14Q9BXL6 1004 aa20.91■□□□□ 0.94
NCKIPSD-201ENST00000294129 FANCIQ9NVI1 1328 aa20.91■□□□□ 0.94
NCKIPSD-201ENST00000294129 SYNMO15061 1565 aa20.91■□□□□ 0.94
NCKIPSD-201ENST00000294129 SAFB2Q14151 953 aaKnown RBP eCLIP20.9■□□□□ 0.94
NCKIPSD-201ENST00000294129 CENPJQ9HC77 1338 aaPredicted RBP20.9■□□□□ 0.94
NCKIPSD-201ENST00000294129 ERVK-7P63135 1459 aa20.89■□□□□ 0.93
NCKIPSD-201ENST00000294129 KDM5AP29375 1690 aaKnown RBP20.89■□□□□ 0.93
NCKIPSD-201ENST00000294129 PLEKHH1Q9ULM0 1364 aa20.88■□□□□ 0.93
NCKIPSD-201ENST00000294129 MYOM2P54296 1465 aa20.88■□□□□ 0.93
NCKIPSD-201ENST00000294129 CYB5RLQ6IPT4 315 aa20.88■□□□□ 0.93
NCKIPSD-201ENST00000294129 MYOM1P52179 1685 aa20.88■□□□□ 0.93
NCKIPSD-201ENST00000294129 FRMPD1Q5SYB0 1578 aa20.87■□□□□ 0.93
NCKIPSD-201ENST00000294129 BCL11AQ9H165 835 aa20.87■□□□□ 0.93
NCKIPSD-201ENST00000294129 SLC12A5Q9H2X9 1139 aa20.86■□□□□ 0.93
NCKIPSD-201ENST00000294129 HECW2Q9P2P5 1572 aa20.85■□□□□ 0.93
NCKIPSD-201ENST00000294129 CRBNQ96SW2 442 aa20.85■□□□□ 0.93
NCKIPSD-201ENST00000294129 APAF1O14727 1248 aa20.85■□□□□ 0.93
NCKIPSD-201ENST00000294129 C20orf194Q5TEA3 1177 aa20.84■□□□□ 0.93
NCKIPSD-201ENST00000294129 KIAA1210Q9ULL0 1709 aa20.84■□□□□ 0.93
NCKIPSD-201ENST00000294129 MLH3Q9UHC1 1453 aa20.83■□□□□ 0.93
NCKIPSD-201ENST00000294129 ZMYM4Q5VZL5 1548 aa20.83■□□□□ 0.93
NCKIPSD-201ENST00000294129 SKAP1Q86WV1 359 aa20.83■□□□□ 0.92
NCKIPSD-201ENST00000294129 STK26Q9P289 416 aa20.82■□□□□ 0.92
NCKIPSD-201ENST00000294129 C14orf93Q9H972 538 aaKnown RBP20.82■□□□□ 0.92
NCKIPSD-201ENST00000294129 ADGRB3O60242 1522 aa20.81■□□□□ 0.92
NCKIPSD-201ENST00000294129 GOLGA2Q08379 1002 aa20.81■□□□□ 0.92
NCKIPSD-201ENST00000294129 LMTK2Q8IWU2 1503 aa20.81■□□□□ 0.92
NCKIPSD-201ENST00000294129 CFAP74Q9C0B2 1584 aa20.8■□□□□ 0.92
NCKIPSD-201ENST00000294129 IFT172Q9UG01 1749 aa20.8■□□□□ 0.92
NCKIPSD-201ENST00000294129 DUSP27Q5VZP5 1158 aa20.79■□□□□ 0.92
NCKIPSD-201ENST00000294129 NEUROD2Q15784 382 aa20.79■□□□□ 0.92
NCKIPSD-201ENST00000294129 MORC1Q86VD1 984 aa20.79■□□□□ 0.92
NCKIPSD-201ENST00000294129 ABCC3O15438 1527 aa20.79■□□□□ 0.92
NCKIPSD-201ENST00000294129 SLC24A1O60721 1099 aa20.79■□□□□ 0.92
NCKIPSD-201ENST00000294129 PIK3C2GO75747 1445 aa20.78■□□□□ 0.92
NCKIPSD-201ENST00000294129 NSD3Q9BZ95 1437 aa20.78■□□□□ 0.92
NCKIPSD-201ENST00000294129 IDI1Q13907 227 aa20.78■□□□□ 0.92
NCKIPSD-201ENST00000294129 NPM2Q86SE8 214 aaKnown RBP20.77■□□□□ 0.92
NCKIPSD-201ENST00000294129 SPINK5Q9NQ38 1064 aaPredicted RBP20.77■□□□□ 0.92
NCKIPSD-201ENST00000294129 YEATS2Q9ULM3 1422 aa20.77■□□□□ 0.92
NCKIPSD-201ENST00000294129 NEURL4Q96JN8 1562 aa20.76■□□□□ 0.91
NCKIPSD-201ENST00000294129 NRXN1Q9ULB1 1477 aa20.76■□□□□ 0.91
NCKIPSD-201ENST00000294129 INSRP06213 1382 aa20.76■□□□□ 0.91
NCKIPSD-201ENST00000294129 CABP2Q9NPB3 220 aa20.75■□□□□ 0.91
NCKIPSD-201ENST00000294129 NPC1L1Q9UHC9 1359 aa20.74■□□□□ 0.91
NCKIPSD-201ENST00000294129 RRP7AQ9Y3A4 280 aaKnown RBP20.74■□□□□ 0.91
NCKIPSD-201ENST00000294129 PPLO60437 1756 aa20.74■□□□□ 0.91
NCKIPSD-201ENST00000294129 VGFO15240 615 aaPredicted RBP20.73■□□□□ 0.91
NCKIPSD-201ENST00000294129 DMRT2Q9Y5R5 561 aa20.73■□□□□ 0.91
NCKIPSD-201ENST00000294129 SIGLEC1Q9BZZ2 1709 aa20.73■□□□□ 0.91
NCKIPSD-201ENST00000294129 CAMSAP1Q5T5Y3 1602 aa20.72■□□□□ 0.91
NCKIPSD-201ENST00000294129 FBXO31Q5XUX0 539 aaPredicted RBP20.72■□□□□ 0.91
NCKIPSD-201ENST00000294129 ZNF521Q96K83 1311 aa20.71■□□□□ 0.91
NCKIPSD-201ENST00000294129 SLFN5Q08AF3 891 aa20.71■□□□□ 0.91
NCKIPSD-201ENST00000294129 NEO1Q92859 1461 aa20.71■□□□□ 0.91
NCKIPSD-201ENST00000294129 QRICH2Q9H0J4 1663 aa20.71■□□□□ 0.91
NCKIPSD-201ENST00000294129 ANP32AP39687 249 aaKnown RBP20.71■□□□□ 0.91
NCKIPSD-201ENST00000294129 RPGRIP1LQ68CZ1 1315 aa20.71■□□□□ 0.91
NCKIPSD-201ENST00000294129 FAM69CQ0P6D2 419 aa20.7■□□□□ 0.9
NCKIPSD-201ENST00000294129 DIP2CQ9Y2E4 1556 aa20.7■□□□□ 0.9
NCKIPSD-201ENST00000294129 SBNO2Q9Y2G9 1366 aa20.69■□□□□ 0.9
NCKIPSD-201ENST00000294129 ADGRB1O14514 1584 aa20.68■□□□□ 0.9
NCKIPSD-201ENST00000294129 PAK3O75914 559 aaPredicted RBP20.68■□□□□ 0.9
NCKIPSD-201ENST00000294129 SRPK2P78362 688 aaKnown RBP20.68■□□□□ 0.9
NCKIPSD-201ENST00000294129 STAG3Q9UJ98 1225 aa20.68■□□□□ 0.9
NCKIPSD-201ENST00000294129 BCAR3O75815 825 aa20.68■□□□□ 0.9
NCKIPSD-201ENST00000294129 MLECQ14165 292 aa20.68■□□□□ 0.9
NCKIPSD-201ENST00000294129 MTHFSP49914 203 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms