RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 KIF3BO15066 747 aa19.7■□□□□ 0.74
SSRP1-202ENST00000293880 RBM10P98175 930 aaKnown RBP19.7■□□□□ 0.74
SSRP1-202ENST00000293880 SKIDA1Q1XH10 827 aa19.7■□□□□ 0.74
SSRP1-202ENST00000293880 ZKSCAN2Q63HK3 967 aa19.7■□□□□ 0.74
SSRP1-202ENST00000293880 KIF3AQ9Y496 699 aa19.7■□□□□ 0.74
SSRP1-202ENST00000293880 VPS37CA5D8V6 355 aaPredicted RBP19.69■□□□□ 0.74
SSRP1-202ENST00000293880 LMOD3Q0VAK6 560 aa19.69■□□□□ 0.74
SSRP1-202ENST00000293880 R3HCC1Q9Y3T6 440 aaKnown RBP19.69■□□□□ 0.74
SSRP1-202ENST00000293880 MAP7D2Q96T17 732 aa19.69■□□□□ 0.74
SSRP1-202ENST00000293880 IFT57Q9NWB7 429 aa19.69■□□□□ 0.74
SSRP1-202ENST00000293880 NAP1L1P55209 391 aaKnown RBP19.68■□□□□ 0.74
SSRP1-202ENST00000293880 ST20-MTHFSA0A0A6YYL1 179 aa19.68■□□□□ 0.74
SSRP1-202ENST00000293880 CADPSQ9ULU8 1353 aa19.68■□□□□ 0.74
SSRP1-202ENST00000293880 ANKRD30AQ9BXX3 1397 aa19.67■□□□□ 0.74
SSRP1-202ENST00000293880 PDE3BQ13370 1112 aa19.67■□□□□ 0.74
SSRP1-202ENST00000293880 TTLL5Q6EMB2 1281 aa19.67■□□□□ 0.74
SSRP1-202ENST00000293880 TRIM29Q14134 588 aa19.67■□□□□ 0.74
SSRP1-202ENST00000293880 HSP90AB3PQ58FF7 597 aa19.66■□□□□ 0.74
SSRP1-202ENST00000293880 SAMD1Q6SPF0 538 aaPredicted RBP19.66■□□□□ 0.74
SSRP1-202ENST00000293880 SYNE3Q6ZMZ3 975 aa19.66■□□□□ 0.74
SSRP1-202ENST00000293880 JPH4Q96JJ6 628 aa19.66■□□□□ 0.74
SSRP1-202ENST00000293880 AEBP2Q6ZN18 517 aaPredicted RBP19.65■□□□□ 0.74
SSRP1-202ENST00000293880 ATP6V1DQ9Y5K8 247 aa19.65■□□□□ 0.74
SSRP1-202ENST00000293880 TCEAL9Q9UHQ7 104 aa19.65■□□□□ 0.74
SSRP1-202ENST00000293880 DHX16O60231 1041 aaKnown RBP19.65■□□□□ 0.74
SSRP1-202ENST00000293880 NFXL1Q6ZNB6 911 aa19.64■□□□□ 0.74
SSRP1-202ENST00000293880 FMN1Q68DA7 1419 aa19.64■□□□□ 0.74
SSRP1-202ENST00000293880 FAM43AQ8N2R8 423 aa19.64■□□□□ 0.73
SSRP1-202ENST00000293880 NOM1Q5C9Z4 860 aaKnown RBP19.64■□□□□ 0.73
SSRP1-202ENST00000293880 C1orf141Q5JVX7 400 aa19.63■□□□□ 0.73
SSRP1-202ENST00000293880 OSCARQ8IYS5 282 aa19.63■□□□□ 0.73
SSRP1-202ENST00000293880 APAF1O14727 1248 aa19.63■□□□□ 0.73
SSRP1-202ENST00000293880 CCDC27Q2M243 656 aa19.62■□□□□ 0.73
SSRP1-202ENST00000293880 PDILTQ8N807 584 aa19.62■□□□□ 0.73
SSRP1-202ENST00000293880 E9PSI1 815 aa19.62■□□□□ 0.73
SSRP1-202ENST00000293880 MSH5O43196 834 aa19.62■□□□□ 0.73
SSRP1-202ENST00000293880 FYB1O15117 783 aa19.62■□□□□ 0.73
SSRP1-202ENST00000293880 SASS6Q6UVJ0 657 aa19.62■□□□□ 0.73
SSRP1-202ENST00000293880 IFIT2P09913 472 aaKnown RBP19.62■□□□□ 0.73
SSRP1-202ENST00000293880 RNF214Q8ND24 703 aa19.62■□□□□ 0.73
SSRP1-202ENST00000293880 IL27Q8NEV9 243 aa19.62■□□□□ 0.73
SSRP1-202ENST00000293880 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.61■□□□□ 0.73
SSRP1-202ENST00000293880 C9orf78Q9NZ63 289 aaPredicted RBP19.61■□□□□ 0.73
SSRP1-202ENST00000293880 WIZO95785 1651 aa19.61■□□□□ 0.73
SSRP1-202ENST00000293880 HDAC5Q9UQL6 1122 aa19.6■□□□□ 0.73
SSRP1-202ENST00000293880 MTMR7Q9Y216 660 aa19.6■□□□□ 0.73
SSRP1-202ENST00000293880 WASHC2CQ9Y4E1 1318 aa19.6■□□□□ 0.73
SSRP1-202ENST00000293880 PHLDB1Q86UU1 1377 aa19.59■□□□□ 0.73
SSRP1-202ENST00000293880 CPLX1O14810 134 aa19.59■□□□□ 0.73
SSRP1-202ENST00000293880 RUFY1Q96T51 708 aa19.59■□□□□ 0.73
SSRP1-202ENST00000293880 TRIM34Q9BYJ4 488 aa19.59■□□□□ 0.73
SSRP1-202ENST00000293880 H0YHG0 523 aa19.59■□□□□ 0.73
SSRP1-202ENST00000293880 EID1Q9Y6B2 187 aa19.59■□□□□ 0.73
SSRP1-202ENST00000293880 SMC3Q9UQE7 1217 aa19.58■□□□□ 0.73
SSRP1-202ENST00000293880 MNS1Q8NEH6 495 aa19.58■□□□□ 0.72
SSRP1-202ENST00000293880 LNPKQ9C0E8 428 aa19.58■□□□□ 0.72
SSRP1-202ENST00000293880 CHMP5Q9NZZ3 219 aa19.58■□□□□ 0.72
SSRP1-202ENST00000293880 FHOD3Q2V2M9 1422 aa19.58■□□□□ 0.72
SSRP1-202ENST00000293880 NFKBIBQ15653 356 aa19.58■□□□□ 0.72
SSRP1-202ENST00000293880 MINK1Q8N4C8 1332 aaPredicted RBP19.57■□□□□ 0.72
SSRP1-202ENST00000293880 COG3Q96JB2 828 aa19.57■□□□□ 0.72
SSRP1-202ENST00000293880 BRPF3Q9ULD4 1205 aa19.56■□□□□ 0.72
SSRP1-202ENST00000293880 FANCIQ9NVI1 1328 aa19.56■□□□□ 0.72
SSRP1-202ENST00000293880 PANK1Q8TE04 598 aa19.56■□□□□ 0.72
SSRP1-202ENST00000293880 ZBED9Q6R2W3 1325 aa19.56■□□□□ 0.72
SSRP1-202ENST00000293880 IPO7O95373 1038 aaKnown RBP19.56■□□□□ 0.72
SSRP1-202ENST00000293880 ZKSCAN1P17029 563 aaPredicted RBP19.55■□□□□ 0.72
SSRP1-202ENST00000293880 ZNF428Q96B54 188 aa19.55■□□□□ 0.72
SSRP1-202ENST00000293880 AK7Q96M32 723 aa19.55■□□□□ 0.72
SSRP1-202ENST00000293880 RIPK4P57078 832 aa19.55■□□□□ 0.72
SSRP1-202ENST00000293880 RDXP35241 583 aaKnown RBP19.55■□□□□ 0.72
SSRP1-202ENST00000293880 CTDP1Q9Y5B0 961 aaPredicted RBP19.55■□□□□ 0.72
SSRP1-202ENST00000293880 REC8O95072 547 aa19.54■□□□□ 0.72
SSRP1-202ENST00000293880 SYTL4Q96C24 671 aaPredicted RBP19.54■□□□□ 0.72
SSRP1-202ENST00000293880 PRKRIP1Q9H875 184 aaPredicted RBP19.54■□□□□ 0.72
SSRP1-202ENST00000293880 DZIP1LQ8IYY4 767 aaKnown RBP19.54■□□□□ 0.72
SSRP1-202ENST00000293880 RUFY2Q8WXA3 655 aa19.54■□□□□ 0.72
SSRP1-202ENST00000293880 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.54■□□□□ 0.72
SSRP1-202ENST00000293880 ANKRD20A12PQ8NF67 263 aa19.53■□□□□ 0.72
SSRP1-202ENST00000293880 CAGE1Q8TC20 777 aa19.53■□□□□ 0.72
SSRP1-202ENST00000293880 EVA1CP58658 441 aa19.53■□□□□ 0.72
SSRP1-202ENST00000293880 C22orf23Q9BZE7 217 aa19.53■□□□□ 0.72
SSRP1-202ENST00000293880 MPNDQ8N594 471 aa19.52■□□□□ 0.72
SSRP1-202ENST00000293880 NOL10Q9BSC4 688 aaKnown RBP19.52■□□□□ 0.72
SSRP1-202ENST00000293880 NASPP49321 788 aaPredicted RBP19.52■□□□□ 0.72
SSRP1-202ENST00000293880 VPS37DQ86XT2 251 aa19.52■□□□□ 0.72
SSRP1-202ENST00000293880 CHMP4AQ9BY43 222 aa19.52■□□□□ 0.72
SSRP1-202ENST00000293880 HMOX1P09601 288 aa19.52■□□□□ 0.72
SSRP1-202ENST00000293880 TTC5Q8N0Z6 440 aa19.52■□□□□ 0.72
SSRP1-202ENST00000293880 DDX19BQ9UMR2 479 aa19.52■□□□□ 0.72
SSRP1-202ENST00000293880 AMOTL1Q8IY63 956 aa19.52■□□□□ 0.71
SSRP1-202ENST00000293880 CGNL1Q0VF96 1302 aa19.51■□□□□ 0.71
SSRP1-202ENST00000293880 USP47Q96K76 1375 aa19.51■□□□□ 0.71
SSRP1-202ENST00000293880 INTS3Q68E01 1043 aaKnown RBP19.51■□□□□ 0.71
SSRP1-202ENST00000293880 CCDC47Q96A33 483 aaKnown RBP19.51■□□□□ 0.71
SSRP1-202ENST00000293880 SPC24Q8NBT2 197 aa19.5■□□□□ 0.71
SSRP1-202ENST00000293880 FKBP5Q13451 457 aaPredicted RBP19.5■□□□□ 0.71
SSRP1-202ENST00000293880 CAVIN1Q6NZI2 390 aaKnown RBP19.5■□□□□ 0.71
SSRP1-202ENST00000293880 TEFQ10587 303 aa19.5■□□□□ 0.71
SSRP1-202ENST00000293880 AIMP1Q12904 312 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms