RNA–Protein interactions for RNA: ENST00000293618.12

LARP4-201, Transcript of La ribonucleoprotein domain family member 4, humanhuman

TSL 1 (best) BASIC

Gene LARP4, Length 6,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-201ENST00000293618 SMARCA4P51532 1647 aa16.6■□□□□ 0.25
LARP4-201ENST00000293618 TDRD9Q8NDG6 1382 aaKnown RBP16.6■□□□□ 0.25
LARP4-201ENST00000293618 CDC45O75419 566 aa16.59■□□□□ 0.25
LARP4-201ENST00000293618 ARGLU1Q9NWB6 273 aaPredicted RBP16.59■□□□□ 0.25
LARP4-201ENST00000293618 SETQ01105 290 aaPredicted RBP16.58■□□□□ 0.24
LARP4-201ENST00000293618 ROCK1Q13464 1354 aa16.58■□□□□ 0.24
LARP4-201ENST00000293618 CADPSQ9ULU8 1353 aa16.58■□□□□ 0.24
LARP4-201ENST00000293618 ZSCAN30Q86W11 494 aa16.58■□□□□ 0.24
LARP4-201ENST00000293618 PANK1Q8TE04 598 aa16.58■□□□□ 0.24
LARP4-201ENST00000293618 MCM2P49736 904 aa16.57■□□□□ 0.24
LARP4-201ENST00000293618 C11orf95C9JLR9 678 aaPredicted RBP16.57■□□□□ 0.24
LARP4-201ENST00000293618 RABEP1Q15276 862 aa16.57■□□□□ 0.24
LARP4-201ENST00000293618 SAFB2Q14151 953 aaKnown RBP eCLIP16.57■□□□□ 0.24
LARP4-201ENST00000293618 HFM1A2PYH4 1435 aa16.57■□□□□ 0.24
LARP4-201ENST00000293618 ARAP1Q96P48 1450 aa16.56■□□□□ 0.24
LARP4-201ENST00000293618 ATAD2BQ9ULI0 1458 aa16.56■□□□□ 0.24
LARP4-201ENST00000293618 PDZRN3Q9UPQ7 1066 aa16.56■□□□□ 0.24
LARP4-201ENST00000293618 CASKIN1Q8WXD9 1431 aa16.56■□□□□ 0.24
LARP4-201ENST00000293618 WDR97A6NE52 1622 aa16.56■□□□□ 0.24
LARP4-201ENST00000293618 LNPKQ9C0E8 428 aa16.56■□□□□ 0.24
LARP4-201ENST00000293618 SF3A1Q15459 793 aaKnown RBP16.56■□□□□ 0.24
LARP4-201ENST00000293618 RUFY2Q8WXA3 655 aa16.56■□□□□ 0.24
LARP4-201ENST00000293618 CWC22Q9HCG8 908 aaKnown RBP16.56■□□□□ 0.24
LARP4-201ENST00000293618 PDCL3Q9H2J4 239 aa16.55■□□□□ 0.24
LARP4-201ENST00000293618 CAVIN1Q6NZI2 390 aaKnown RBP16.55■□□□□ 0.24
LARP4-201ENST00000293618 HNRNPMP52272 730 aaKnown RBP eCLIP16.55■□□□□ 0.24
LARP4-201ENST00000293618 SLC4A10Q6U841 1118 aa16.55■□□□□ 0.24
LARP4-201ENST00000293618 ZNF592Q92610 1267 aa16.54■□□□□ 0.24
LARP4-201ENST00000293618 HSP90B1P14625 803 aaKnown RBP16.54■□□□□ 0.24
LARP4-201ENST00000293618 ZKSCAN1P17029 563 aaPredicted RBP16.54■□□□□ 0.24
LARP4-201ENST00000293618 CCDC184Q52MB2 194 aa16.54■□□□□ 0.24
LARP4-201ENST00000293618 RILPL2Q969X0 211 aa16.53■□□□□ 0.24
LARP4-201ENST00000293618 FYCO1Q9BQS8 1478 aa16.53■□□□□ 0.24
LARP4-201ENST00000293618 NOM1Q5C9Z4 860 aaKnown RBP16.53■□□□□ 0.24
LARP4-201ENST00000293618 H3BQV1 296 aa16.52■□□□□ 0.24
LARP4-201ENST00000293618 IFFO2Q5TF58 517 aa16.52■□□□□ 0.24
LARP4-201ENST00000293618 IFT57Q9NWB7 429 aa16.52■□□□□ 0.24
LARP4-201ENST00000293618 TAOK2Q9UL54 1235 aa16.52■□□□□ 0.24
LARP4-201ENST00000293618 CT47B1P0C2W7 299 aaPredicted RBP16.52■□□□□ 0.23
LARP4-201ENST00000293618 PODXL2Q9NZ53 605 aa16.51■□□□□ 0.23
LARP4-201ENST00000293618 TSPY26PQ9H489 355 aa16.51■□□□□ 0.23
LARP4-201ENST00000293618 STK26Q9P289 416 aa16.51■□□□□ 0.23
LARP4-201ENST00000293618 TAF3Q5VWG9 929 aa16.51■□□□□ 0.23
LARP4-201ENST00000293618 RBM10P98175 930 aaKnown RBP16.5■□□□□ 0.23
LARP4-201ENST00000293618 FAM184AQ8NB25 1140 aa16.5■□□□□ 0.23
LARP4-201ENST00000293618 SMC3Q9UQE7 1217 aa16.5■□□□□ 0.23
LARP4-201ENST00000293618 PDS5BQ9NTI5 1447 aa16.5■□□□□ 0.23
LARP4-201ENST00000293618 FOXD4L6Q3SYB3 417 aaPredicted RBP16.49■□□□□ 0.23
LARP4-201ENST00000293618 SASS6Q6UVJ0 657 aa16.49■□□□□ 0.23
LARP4-201ENST00000293618 FOXD4L3Q6VB84 417 aaPredicted RBP16.49■□□□□ 0.23
LARP4-201ENST00000293618 GCC1Q96CN9 775 aa16.49■□□□□ 0.23
LARP4-201ENST00000293618 RNF214Q8ND24 703 aa16.49■□□□□ 0.23
LARP4-201ENST00000293618 PPP2R1AP30153 589 aa16.49■□□□□ 0.23
LARP4-201ENST00000293618 EVC2Q86UK5 1308 aa16.49■□□□□ 0.23
LARP4-201ENST00000293618 ANO2Q9NQ90 1003 aa16.49■□□□□ 0.23
LARP4-201ENST00000293618 CWC15Q9P013 229 aaKnown RBP16.49■□□□□ 0.23
LARP4-201ENST00000293618 NCOA2Q15596 1464 aa16.48■□□□□ 0.23
LARP4-201ENST00000293618 HOMER1Q86YM7 354 aa16.48■□□□□ 0.23
LARP4-201ENST00000293618 NBPF8Q3BBV2 869 aa16.48■□□□□ 0.23
LARP4-201ENST00000293618 A0A0U1RQG5 324 aaPredicted RBP16.48■□□□□ 0.23
LARP4-201ENST00000293618 K7ELQ4 463 aaPredicted RBP16.48■□□□□ 0.23
LARP4-201ENST00000293618 NOC3LQ8WTT2 800 aaKnown RBP16.47■□□□□ 0.23
LARP4-201ENST00000293618 UQCRHLA0A096LP55 91 aa16.47■□□□□ 0.23
LARP4-201ENST00000293618 PRPF40AO75400 957 aaKnown RBP16.47■□□□□ 0.23
LARP4-201ENST00000293618 UQCRHP07919 91 aa16.47■□□□□ 0.23
LARP4-201ENST00000293618 TPM1P09493 284 aa16.47■□□□□ 0.23
LARP4-201ENST00000293618 GNAI1P63096 354 aa16.47■□□□□ 0.23
LARP4-201ENST00000293618 RIPK4P57078 832 aa16.47■□□□□ 0.23
LARP4-201ENST00000293618 PRXQ9BXM0 1461 aa16.47■□□□□ 0.23
LARP4-201ENST00000293618 MNS1Q8NEH6 495 aa16.47■□□□□ 0.23
LARP4-201ENST00000293618 ACBD3Q9H3P7 528 aa16.47■□□□□ 0.23
LARP4-201ENST00000293618 KIF3BO15066 747 aa16.46■□□□□ 0.23
LARP4-201ENST00000293618 CCDC70Q6NSX1 233 aa16.46■□□□□ 0.23
LARP4-201ENST00000293618 PDCL2Q8N4E4 241 aa16.46■□□□□ 0.23
LARP4-201ENST00000293618 ELL2O00472 640 aaPredicted RBP16.46■□□□□ 0.23
LARP4-201ENST00000293618 DHX8Q14562 1220 aaKnown RBP16.46■□□□□ 0.23
LARP4-201ENST00000293618 DIAPH1O60610 1272 aaKnown RBP16.46■□□□□ 0.23
LARP4-201ENST00000293618 BICD2Q8TD16 824 aa16.46■□□□□ 0.23
LARP4-201ENST00000293618 GGT6Q6P531 493 aa16.46■□□□□ 0.22
LARP4-201ENST00000293618 TRAK1Q9UPV9 953 aa16.46■□□□□ 0.22
LARP4-201ENST00000293618 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.45■□□□□ 0.22
LARP4-201ENST00000293618 CLCN1P35523 988 aa16.45■□□□□ 0.22
LARP4-201ENST00000293618 RNF20Q5VTR2 975 aa16.45■□□□□ 0.22
LARP4-201ENST00000293618 TCP11L2Q8N4U5 519 aa16.45■□□□□ 0.22
LARP4-201ENST00000293618 ANKRD50Q9ULJ7 1429 aa16.45■□□□□ 0.22
LARP4-201ENST00000293618 CCAR2Q8N163 923 aaKnown RBP16.45■□□□□ 0.22
LARP4-201ENST00000293618 TSR1Q2NL82 804 aaKnown RBP16.43■□□□□ 0.22
LARP4-201ENST00000293618 WDR63Q8IWG1 891 aa16.43■□□□□ 0.22
LARP4-201ENST00000293618 MCM5P33992 734 aa16.43■□□□□ 0.22
LARP4-201ENST00000293618 HSP90B2PQ58FF3 399 aa16.42■□□□□ 0.22
LARP4-201ENST00000293618 CCDC73Q6ZRK6 1079 aa16.42■□□□□ 0.22
LARP4-201ENST00000293618 SCAPERQ9BY12 1400 aa16.42■□□□□ 0.22
LARP4-201ENST00000293618 NAT10Q9H0A0 1025 aaKnown RBP16.42■□□□□ 0.22
LARP4-201ENST00000293618 VPS37CA5D8V6 355 aaPredicted RBP16.42■□□□□ 0.22
LARP4-201ENST00000293618 PLEKHH2Q8IVE3 1493 aa16.42■□□□□ 0.22
LARP4-201ENST00000293618 BCAR3O75815 825 aa16.41■□□□□ 0.22
LARP4-201ENST00000293618 PDCP20941 246 aa16.41■□□□□ 0.22
LARP4-201ENST00000293618 HSP90AB4PQ58FF6 505 aa16.41■□□□□ 0.22
LARP4-201ENST00000293618 SOX12O15370 315 aa16.41■□□□□ 0.22
LARP4-201ENST00000293618 PLPPR3Q6T4P5 718 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms