RNA–Protein interactions for RNA: ENST00000275080.11

CD164-201, Transcript of CD164 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD164, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-201ENST00000275080 TNNQ9UQP3 1299 aa11.89□□□□□ -0.51
CD164-201ENST00000275080 TTC37Q6PGP7 1564 aa11.89□□□□□ -0.51
CD164-201ENST00000275080 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.89□□□□□ -0.512e-6■■□□□ 12.7
CD164-201ENST00000275080 MYO5CQ9NQX4 1742 aa11.89□□□□□ -0.51
CD164-201ENST00000275080 SYCP2Q9BX26 1530 aa11.88□□□□□ -0.51
CD164-201ENST00000275080 UNC13BO14795 1591 aa11.88□□□□□ -0.51
CD164-201ENST00000275080 PLXNC1O60486 1568 aa11.88□□□□□ -0.51
CD164-201ENST00000275080 ERCC6L2Q5T890 1561 aa11.88□□□□□ -0.51
CD164-201ENST00000275080 KIF3BO15066 747 aa11.87□□□□□ -0.51
CD164-201ENST00000275080 IGHDP01880 384 aa11.87□□□□□ -0.51
CD164-201ENST00000275080 TRAK1Q9UPV9 953 aa11.87□□□□□ -0.51
CD164-201ENST00000275080 PRAG1Q86YV5 1406 aa11.86□□□□□ -0.51
CD164-201ENST00000275080 ERBINQ96RT1 1412 aa11.86□□□□□ -0.51
CD164-201ENST00000275080 SEC24BO95487 1268 aa11.86□□□□□ -0.51
CD164-201ENST00000275080 TMEM132EQ6IEE7 984 aa11.86□□□□□ -0.51
CD164-201ENST00000275080 PPM1GO15355 546 aaPredicted RBP11.85□□□□□ -0.51
CD164-201ENST00000275080 MS4A1P11836 297 aa11.85□□□□□ -0.51
CD164-201ENST00000275080 AMER1Q5JTC6 1135 aaPredicted RBP11.84□□□□□ -0.51
CD164-201ENST00000275080 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.84□□□□□ -0.51
CD164-201ENST00000275080 FAM161AQ3B820 660 aa11.84□□□□□ -0.51
CD164-201ENST00000275080 ZCCHC11Q5TAX3 1644 aaKnown RBP11.84□□□□□ -0.51
CD164-201ENST00000275080 IQGAP3Q86VI3 1631 aa11.83□□□□□ -0.52
CD164-201ENST00000275080 GSE1Q14687 1217 aa11.83□□□□□ -0.52
CD164-201ENST00000275080 C8orf34Q49A92 452 aa11.83□□□□□ -0.52
CD164-201ENST00000275080 DUOX2Q9NRD8 1548 aa11.83□□□□□ -0.52
CD164-201ENST00000275080 CENPQQ7L2Z9 268 aaPredicted RBP11.83□□□□□ -0.52
CD164-201ENST00000275080 DDRGK1Q96HY6 314 aa11.83□□□□□ -0.52
CD164-201ENST00000275080 GZF1Q9H116 711 aaPredicted RBP11.83□□□□□ -0.52
CD164-201ENST00000275080 SLC12A5Q9H2X9 1139 aa11.83□□□□□ -0.52
CD164-201ENST00000275080 A2MP01023 1474 aa11.82□□□□□ -0.52
CD164-201ENST00000275080 PLA2R1Q13018 1463 aa11.82□□□□□ -0.52
CD164-201ENST00000275080 ARAP3Q8WWN8 1544 aa11.82□□□□□ -0.52
CD164-201ENST00000275080 PLCH2O75038 1416 aa11.81□□□□□ -0.52
CD164-201ENST00000275080 SLFN5Q08AF3 891 aa11.81□□□□□ -0.52
CD164-201ENST00000275080 GGT6Q6P531 493 aa11.81□□□□□ -0.52
CD164-201ENST00000275080 CARD14Q9BXL6 1004 aa11.81□□□□□ -0.52
CD164-201ENST00000275080 MAGI2Q86UL8 1455 aa11.81□□□□□ -0.52
CD164-201ENST00000275080 TRPM1Q7Z4N2 1603 aa11.8□□□□□ -0.52
CD164-201ENST00000275080 SPAG9O60271 1321 aaKnown RBP11.79□□□□□ -0.52
CD164-201ENST00000275080 MORC1Q86VD1 984 aa11.79□□□□□ -0.52
CD164-201ENST00000275080 STK26Q9P289 416 aa11.79□□□□□ -0.52
CD164-201ENST00000275080 ATP10AO60312 1499 aa11.79□□□□□ -0.52
CD164-201ENST00000275080 ADGRF5Q8IZF2 1346 aa11.79□□□□□ -0.52
CD164-201ENST00000275080 LAMC1P11047 1609 aa11.79□□□□□ -0.52
CD164-201ENST00000275080 EFCAB2Q5VUJ9 269 aa11.79□□□□□ -0.52
CD164-201ENST00000275080 U2SURPO15042 1029 aaKnown RBP11.78□□□□□ -0.52
CD164-201ENST00000275080 ABCC1P33527 1531 aa11.78□□□□□ -0.52
CD164-201ENST00000275080 EIF2AK4Q9P2K8 1649 aaKnown RBP11.78□□□□□ -0.52
CD164-201ENST00000275080 KDM2BQ8NHM5 1336 aa11.78□□□□□ -0.52
CD164-201ENST00000275080 RLBP1P12271 317 aa11.77□□□□□ -0.52
CD164-201ENST00000275080 POGKQ9P215 609 aa11.77□□□□□ -0.52
CD164-201ENST00000275080 E9PCH4 1651 aa11.77□□□□□ -0.53
CD164-201ENST00000275080 CENPJQ9HC77 1338 aaPredicted RBP11.77□□□□□ -0.53
CD164-201ENST00000275080 TSR2Q969E8 191 aaKnown RBP11.77□□□□□ -0.53
CD164-201ENST00000275080 GPRASP1Q5JY77 1395 aa11.77□□□□□ -0.53
CD164-201ENST00000275080 U2AF1L5P0DN76 240 aaPredicted RBP11.76□□□□□ -0.53
CD164-201ENST00000275080 U2AF1Q01081 240 aaKnown RBP eCLIP11.76□□□□□ -0.531e-23■■■□□ 16
CD164-201ENST00000275080 FBLN1P23142 703 aa11.76□□□□□ -0.53
CD164-201ENST00000275080 WWC1Q8IX03 1113 aa11.76□□□□□ -0.53
CD164-201ENST00000275080 TCP11L2Q8N4U5 519 aa11.76□□□□□ -0.53
CD164-201ENST00000275080 MTHFSP49914 203 aa11.75□□□□□ -0.53
CD164-201ENST00000275080 CDCA8Q53HL2 280 aa11.75□□□□□ -0.53
CD164-201ENST00000275080 USP35Q9P2H5 1018 aa11.74□□□□□ -0.53
CD164-201ENST00000275080 RTEL1-TNFRSF6BF6WH68 1400 aa11.74□□□□□ -0.53
CD164-201ENST00000275080 COL17A1Q9UMD9 1497 aaPredicted RBP11.74□□□□□ -0.53
CD164-201ENST00000275080 PCDHB15Q9Y5E8 787 aa11.74□□□□□ -0.53
CD164-201ENST00000275080 PRDM15P57071 1507 aaPredicted RBP11.73□□□□□ -0.53
CD164-201ENST00000275080 E9PSI1 815 aa11.73□□□□□ -0.53
CD164-201ENST00000275080 MFAP1P55081 439 aaKnown RBP11.73□□□□□ -0.53
CD164-201ENST00000275080 FOXD4L1Q9NU39 408 aa11.73□□□□□ -0.53
CD164-201ENST00000275080 WASHC2CQ9Y4E1 1318 aa11.72□□□□□ -0.53
CD164-201ENST00000275080 TRAPPC8Q9Y2L5 1435 aa11.72□□□□□ -0.53
CD164-201ENST00000275080 ELL2O00472 640 aaPredicted RBP11.72□□□□□ -0.53
CD164-201ENST00000275080 FTSJ3Q8IY81 847 aaKnown RBP11.72□□□□□ -0.53
CD164-201ENST00000275080 CABP2Q9NPB3 220 aa11.72□□□□□ -0.53
CD164-201ENST00000275080 ABCA9Q8IUA7 1624 aa11.71□□□□□ -0.53
CD164-201ENST00000275080 GGNBP2Q9H3C7 697 aa11.7□□□□□ -0.54
CD164-201ENST00000275080 BLMP54132 1417 aaPredicted RBP11.7□□□□□ -0.54
CD164-201ENST00000275080 ZFYVE16Q7Z3T8 1539 aa11.7□□□□□ -0.54
CD164-201ENST00000275080 PDZRN3Q9UPQ7 1066 aa11.7□□□□□ -0.54
CD164-201ENST00000275080 ZNF521Q96K83 1311 aa11.7□□□□□ -0.54
CD164-201ENST00000275080 RNF17Q9BXT8 1623 aaKnown RBP11.69□□□□□ -0.54
CD164-201ENST00000275080 ITPRIPQ8IWB1 547 aa11.69□□□□□ -0.54
CD164-201ENST00000275080 WDR7Q9Y4E6 1490 aa11.69□□□□□ -0.54
CD164-201ENST00000275080 SCAPERQ9BY12 1400 aa11.69□□□□□ -0.54
CD164-201ENST00000275080 STAC3Q96MF2 364 aa11.68□□□□□ -0.54
CD164-201ENST00000275080 UPF2Q9HAU5 1272 aaKnown RBP11.68□□□□□ -0.54
CD164-201ENST00000275080 DEPDC5O75140 1603 aa11.68□□□□□ -0.54
CD164-201ENST00000275080 TRPM2O94759 1503 aa11.68□□□□□ -0.54
CD164-201ENST00000275080 RARSP54136 660 aaKnown RBP11.68□□□□□ -0.54
CD164-201ENST00000275080 SRPK2P78362 688 aaKnown RBP11.67□□□□□ -0.54
CD164-201ENST00000275080 SMC4Q9NTJ3 1288 aa11.67□□□□□ -0.54
CD164-201ENST00000275080 ZMYM4Q5VZL5 1548 aa11.66□□□□□ -0.54
CD164-201ENST00000275080 INO80Q9ULG1 1556 aaPredicted RBP11.66□□□□□ -0.54
CD164-201ENST00000275080 CFAP65Q6ZU64 1925 aaKnown RBP11.66□□□□□ -0.54
CD164-201ENST00000275080 USP19O94966 1318 aa11.65□□□□□ -0.54
CD164-201ENST00000275080 CEP152O94986 1710 aa11.65□□□□□ -0.54
CD164-201ENST00000275080 SPHKAPQ2M3C7 1700 aa11.65□□□□□ -0.54
CD164-201ENST00000275080 PRKCSHP14314 528 aaPredicted RBP11.65□□□□□ -0.54
CD164-201ENST00000275080 TET3O43151 1660 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms