RNA–Protein interactions for RNA: ENST00000270570.8

SLC47A1-201, Transcript of solute carrier family 47 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC47A1, Length 3,280 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-201ENST00000270570 FAM161AQ3B820 660 aa17.04■□□□□ 0.32
SLC47A1-201ENST00000270570 IGHDP01880 384 aa17.04■□□□□ 0.32
SLC47A1-201ENST00000270570 ARHGEF12Q9NZN5 1544 aa17.03■□□□□ 0.32
SLC47A1-201ENST00000270570 SLC12A5Q9H2X9 1139 aa17.03■□□□□ 0.32
SLC47A1-201ENST00000270570 POLR1AO95602 1720 aaPredicted RBP17.03■□□□□ 0.32
SLC47A1-201ENST00000270570 MORC1Q86VD1 984 aa17.02■□□□□ 0.32
SLC47A1-201ENST00000270570 MAGI2Q86UL8 1455 aa17.02■□□□□ 0.32
SLC47A1-201ENST00000270570 COL17A1Q9UMD9 1497 aaPredicted RBP17.02■□□□□ 0.31
SLC47A1-201ENST00000270570 SLFN5Q08AF3 891 aa17.02■□□□□ 0.31
SLC47A1-201ENST00000270570 CDCA8Q53HL2 280 aa17.02■□□□□ 0.31
SLC47A1-201ENST00000270570 KDM5DQ9BY66 1539 aa17.01■□□□□ 0.31
SLC47A1-201ENST00000270570 ADGRF5Q8IZF2 1346 aa17.01■□□□□ 0.31
SLC47A1-201ENST00000270570 STK26Q9P289 416 aa17■□□□□ 0.31
SLC47A1-201ENST00000270570 SEC24BO95487 1268 aa17■□□□□ 0.31
SLC47A1-201ENST00000270570 C8orf34Q49A92 452 aa17■□□□□ 0.31
SLC47A1-201ENST00000270570 NUP160Q12769 1436 aa17■□□□□ 0.31
SLC47A1-201ENST00000270570 SAMD9LQ8IVG5 1584 aa16.99■□□□□ 0.31
SLC47A1-201ENST00000270570 CARD14Q9BXL6 1004 aa16.99■□□□□ 0.31
SLC47A1-201ENST00000270570 U2SURPO15042 1029 aaKnown RBP16.99■□□□□ 0.31
SLC47A1-201ENST00000270570 CENPJQ9HC77 1338 aaPredicted RBP16.98■□□□□ 0.31
SLC47A1-201ENST00000270570 TRAPPC8Q9Y2L5 1435 aa16.98■□□□□ 0.31
SLC47A1-201ENST00000270570 GSE1Q14687 1217 aa16.97■□□□□ 0.31
SLC47A1-201ENST00000270570 CROCC2H7BZ55 1655 aa16.97■□□□□ 0.31
SLC47A1-201ENST00000270570 SHANK2Q9UPX8 1470 aa16.97■□□□□ 0.31
SLC47A1-201ENST00000270570 WASHC2CQ9Y4E1 1318 aa16.96■□□□□ 0.31
SLC47A1-201ENST00000270570 U2AF1L5P0DN76 240 aaPredicted RBP16.96■□□□□ 0.31
SLC47A1-201ENST00000270570 U2AF1Q01081 240 aaKnown RBP eCLIP16.96■□□□□ 0.31
SLC47A1-201ENST00000270570 ABCA8O94911 1581 aa16.96■□□□□ 0.31
SLC47A1-201ENST00000270570 KDM2BQ8NHM5 1336 aa16.96■□□□□ 0.3
SLC47A1-201ENST00000270570 GZF1Q9H116 711 aaPredicted RBP16.94■□□□□ 0.3
SLC47A1-201ENST00000270570 TCP11L2Q8N4U5 519 aa16.94■□□□□ 0.3
SLC47A1-201ENST00000270570 BLMP54132 1417 aaPredicted RBP16.93■□□□□ 0.3
SLC47A1-201ENST00000270570 TSR2Q969E8 191 aaKnown RBP16.93■□□□□ 0.3
SLC47A1-201ENST00000270570 E9PSI1 815 aa16.93■□□□□ 0.3
SLC47A1-201ENST00000270570 MTHFSP49914 203 aa16.93■□□□□ 0.3
SLC47A1-201ENST00000270570 WWC1Q8IX03 1113 aa16.92■□□□□ 0.3
SLC47A1-201ENST00000270570 SCAPERQ9BY12 1400 aa16.92■□□□□ 0.3
SLC47A1-201ENST00000270570 GPRASP1Q5JY77 1395 aa16.92■□□□□ 0.3
SLC47A1-201ENST00000270570 TTC37Q6PGP7 1564 aa16.91■□□□□ 0.3
SLC47A1-201ENST00000270570 RLBP1P12271 317 aa16.91■□□□□ 0.3
SLC47A1-201ENST00000270570 TRPM1Q7Z4N2 1603 aa16.91■□□□□ 0.3
SLC47A1-201ENST00000270570 ERCC6L2Q5T890 1561 aa16.9■□□□□ 0.3
SLC47A1-201ENST00000270570 FTSJ3Q8IY81 847 aaKnown RBP16.9■□□□□ 0.3
SLC47A1-201ENST00000270570 WDR7Q9Y4E6 1490 aa16.9■□□□□ 0.3
SLC47A1-201ENST00000270570 USP35Q9P2H5 1018 aa16.9■□□□□ 0.3
SLC47A1-201ENST00000270570 CABP2Q9NPB3 220 aa16.89■□□□□ 0.29
SLC47A1-201ENST00000270570 ZMYM4Q5VZL5 1548 aa16.88■□□□□ 0.29
SLC47A1-201ENST00000270570 ADCY10Q96PN6 1610 aa16.88■□□□□ 0.29
SLC47A1-201ENST00000270570 POGKQ9P215 609 aa16.87■□□□□ 0.29
SLC47A1-201ENST00000270570 CDC42BPBQ9Y5S2 1711 aa16.87■□□□□ 0.29
SLC47A1-201ENST00000270570 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.87■□□□□ 0.29
SLC47A1-201ENST00000270570 KANK1Q14678 1352 aa16.87■□□□□ 0.29
SLC47A1-201ENST00000270570 MFAP1P55081 439 aaKnown RBP16.87■□□□□ 0.29
SLC47A1-201ENST00000270570 PCDHB15Q9Y5E8 787 aa16.87■□□□□ 0.29
SLC47A1-201ENST00000270570 FBLN1P23142 703 aa16.87■□□□□ 0.29
SLC47A1-201ENST00000270570 GGNBP2Q9H3C7 697 aa16.87■□□□□ 0.29
SLC47A1-201ENST00000270570 ZNF521Q96K83 1311 aa16.86■□□□□ 0.29
SLC47A1-201ENST00000270570 UGGT1Q9NYU2 1555 aa16.86■□□□□ 0.29
SLC47A1-201ENST00000270570 SRPK2P78362 688 aaKnown RBP16.86■□□□□ 0.29
SLC47A1-201ENST00000270570 UPF2Q9HAU5 1272 aaKnown RBP16.85■□□□□ 0.29
SLC47A1-201ENST00000270570 EIF3AQ14152 1382 aaKnown RBP16.85■□□□□ 0.29
SLC47A1-201ENST00000270570 CFAP65Q6ZU64 1925 aaKnown RBP16.84■□□□□ 0.29
SLC47A1-201ENST00000270570 ITPRIPQ8IWB1 547 aa16.84■□□□□ 0.29
SLC47A1-201ENST00000270570 ELL2O00472 640 aaPredicted RBP16.84■□□□□ 0.29
SLC47A1-201ENST00000270570 PDZRN3Q9UPQ7 1066 aa16.84■□□□□ 0.29
SLC47A1-201ENST00000270570 PRDM15P57071 1507 aaPredicted RBP16.83■□□□□ 0.28
SLC47A1-201ENST00000270570 SMC4Q9NTJ3 1288 aa16.83■□□□□ 0.28
SLC47A1-201ENST00000270570 NKTRP30414 1462 aaKnown RBP16.83■□□□□ 0.28
SLC47A1-201ENST00000270570 SCAF11Q99590 1463 aaKnown RBP16.83■□□□□ 0.28
SLC47A1-201ENST00000270570 NSD3Q9BZ95 1437 aa16.83■□□□□ 0.28
SLC47A1-201ENST00000270570 FOXD4L1Q9NU39 408 aa16.82■□□□□ 0.28
SLC47A1-201ENST00000270570 CGNL1Q0VF96 1302 aa16.81■□□□□ 0.28
SLC47A1-201ENST00000270570 RARSP54136 660 aaKnown RBP16.81■□□□□ 0.28
SLC47A1-201ENST00000270570 ARHGEF5Q12774 1597 aa16.81■□□□□ 0.28
SLC47A1-201ENST00000270570 CFAP53Q96M91 514 aa16.81■□□□□ 0.28
SLC47A1-201ENST00000270570 E9PCH4 1651 aa16.81■□□□□ 0.28
SLC47A1-201ENST00000270570 ASXL1Q8IXJ9 1541 aa16.81■□□□□ 0.28
SLC47A1-201ENST00000270570 BECN1Q14457 450 aa16.8■□□□□ 0.28
SLC47A1-201ENST00000270570 RUNDC1Q96C34 613 aa16.8■□□□□ 0.28
SLC47A1-201ENST00000270570 MINK1Q8N4C8 1332 aaPredicted RBP16.79■□□□□ 0.28
SLC47A1-201ENST00000270570 PREX2Q70Z35 1606 aa16.78■□□□□ 0.28
SLC47A1-201ENST00000270570 EXOSC9Q06265 439 aaKnown RBP16.78■□□□□ 0.28
SLC47A1-201ENST00000270570 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.78■□□□□ 0.28
SLC47A1-201ENST00000270570 UBE2Q2Q8WVN8 375 aa16.78■□□□□ 0.28
SLC47A1-201ENST00000270570 DUOX2Q9NRD8 1548 aa16.77■□□□□ 0.28
SLC47A1-201ENST00000270570 PLCH2O75038 1416 aa16.77■□□□□ 0.28
SLC47A1-201ENST00000270570 ATP10AO60312 1499 aa16.76■□□□□ 0.27
SLC47A1-201ENST00000270570 NOS1P29475 1434 aa16.76■□□□□ 0.27
SLC47A1-201ENST00000270570 MAPK8IP3Q9UPT6 1336 aa16.75■□□□□ 0.27
SLC47A1-201ENST00000270570 PDE3AQ14432 1141 aa16.75■□□□□ 0.27
SLC47A1-201ENST00000270570 C1orf115Q9H7X2 142 aa16.75■□□□□ 0.27
SLC47A1-201ENST00000270570 THUMPD2Q9BTF0 503 aaKnown RBP16.74■□□□□ 0.27
SLC47A1-201ENST00000270570 MYO5CQ9NQX4 1742 aa16.74■□□□□ 0.27
SLC47A1-201ENST00000270570 RAPGEF3O95398 923 aa16.74■□□□□ 0.27
SLC47A1-201ENST00000270570 TRMT2AQ8IZ69 625 aaKnown RBP16.74■□□□□ 0.27
SLC47A1-201ENST00000270570 MAST1Q9Y2H9 1570 aa16.74■□□□□ 0.27
SLC47A1-201ENST00000270570 LNPKQ9C0E8 428 aa16.74■□□□□ 0.27
SLC47A1-201ENST00000270570 USP19O94966 1318 aa16.73■□□□□ 0.27
SLC47A1-201ENST00000270570 RWDD1Q9H446 243 aaPredicted RBP16.73■□□□□ 0.27
SLC47A1-201ENST00000270570 STAG3Q9UJ98 1225 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms