RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 ZNF521Q96K83 1311 aa22.03■■□□□ 1.12
LRRC56-201ENST00000270115 MCM4P33991 863 aa22.03■■□□□ 1.12
LRRC56-201ENST00000270115 ADCY10Q96PN6 1610 aa22.02■■□□□ 1.12
LRRC56-201ENST00000270115 ABCC10Q5T3U5 1492 aa22.02■■□□□ 1.12
LRRC56-201ENST00000270115 EIF3AQ14152 1382 aaKnown RBP22.02■■□□□ 1.12
LRRC56-201ENST00000270115 PPP2R1AP30153 589 aa22.01■■□□□ 1.11
LRRC56-201ENST00000270115 UPF2Q9HAU5 1272 aaKnown RBP22.01■■□□□ 1.11
LRRC56-201ENST00000270115 COG6Q9Y2V7 657 aa22.01■■□□□ 1.11
LRRC56-201ENST00000270115 TESK2Q96S53 571 aa22■■□□□ 1.11
LRRC56-201ENST00000270115 PANK1Q8TE04 598 aa22■■□□□ 1.11
LRRC56-201ENST00000270115 MAPK8IP3Q9UPT6 1336 aa21.99■■□□□ 1.11
LRRC56-201ENST00000270115 CANXP27824 592 aaKnown RBP21.99■■□□□ 1.11
LRRC56-201ENST00000270115 NLRP1Q9C000 1473 aa21.98■■□□□ 1.11
LRRC56-201ENST00000270115 TRAK2O60296 914 aa21.98■■□□□ 1.11
LRRC56-201ENST00000270115 CLASP1Q7Z460 1538 aa21.97■■□□□ 1.11
LRRC56-201ENST00000270115 APAF1O14727 1248 aa21.97■■□□□ 1.11
LRRC56-201ENST00000270115 CLUAP1Q96AJ1 413 aa21.97■■□□□ 1.11
LRRC56-201ENST00000270115 TBC1D32Q96NH3 1257 aa21.97■■□□□ 1.11
LRRC56-201ENST00000270115 COL17A1Q9UMD9 1497 aaPredicted RBP21.96■■□□□ 1.11
LRRC56-201ENST00000270115 CDC42BPAQ5VT25 1732 aa21.96■■□□□ 1.11
LRRC56-201ENST00000270115 TMF1P82094 1093 aa21.96■■□□□ 1.11
LRRC56-201ENST00000270115 MYH16Q9H6N6 1097 aa21.96■■□□□ 1.11
LRRC56-201ENST00000270115 ADGBQ8N7X0 1667 aa21.96■■□□□ 1.11
LRRC56-201ENST00000270115 ITSN2Q9NZM3 1697 aa21.96■■□□□ 1.11
LRRC56-201ENST00000270115 ERBB4Q15303 1308 aa21.96■■□□□ 1.11
LRRC56-201ENST00000270115 TSPY4P0CV99 314 aa21.95■■□□□ 1.1
LRRC56-201ENST00000270115 TSPY10P0CW01 314 aa21.95■■□□□ 1.1
LRRC56-201ENST00000270115 KNSTRNQ9Y448 316 aa21.95■■□□□ 1.1
LRRC56-201ENST00000270115 VIRMAQ69YN4 1812 aaKnown RBP21.95■■□□□ 1.1
LRRC56-201ENST00000270115 ESPNB1AK53 854 aa21.95■■□□□ 1.1
LRRC56-201ENST00000270115 PRAG1Q86YV5 1406 aa21.94■■□□□ 1.1
LRRC56-201ENST00000270115 MRE11P49959 708 aa21.94■■□□□ 1.1
LRRC56-201ENST00000270115 ADGRL2O95490 1459 aa21.94■■□□□ 1.1
LRRC56-201ENST00000270115 DMRT2Q9Y5R5 561 aa21.93■■□□□ 1.1
LRRC56-201ENST00000270115 ERBINQ96RT1 1412 aa21.93■■□□□ 1.1
LRRC56-201ENST00000270115 TRMT2AQ8IZ69 625 aaKnown RBP21.93■■□□□ 1.1
LRRC56-201ENST00000270115 GRPEL1Q9HAV7 217 aa21.93■■□□□ 1.1
LRRC56-201ENST00000270115 CGNL1Q0VF96 1302 aa21.92■■□□□ 1.1
LRRC56-201ENST00000270115 NKTRP30414 1462 aaKnown RBP21.92■■□□□ 1.1
LRRC56-201ENST00000270115 ABCC2Q92887 1545 aa21.9■■□□□ 1.1
LRRC56-201ENST00000270115 C9orf84Q5VXU9 1444 aa21.89■■□□□ 1.09
LRRC56-201ENST00000270115 KDM5DQ9BY66 1539 aa21.88■■□□□ 1.09
LRRC56-201ENST00000270115 TRPM1Q7Z4N2 1603 aa21.88■■□□□ 1.09
LRRC56-201ENST00000270115 TRIM44Q96DX7 344 aaPredicted RBP21.88■■□□□ 1.09
LRRC56-201ENST00000270115 CHMP5Q9NZZ3 219 aa21.88■■□□□ 1.09
LRRC56-201ENST00000270115 PDZRN3Q9UPQ7 1066 aa21.87■■□□□ 1.09
LRRC56-201ENST00000270115 PDE3AQ14432 1141 aa21.87■■□□□ 1.09
LRRC56-201ENST00000270115 E9PSI1 815 aa21.86■■□□□ 1.09
LRRC56-201ENST00000270115 PCDHB15Q9Y5E8 787 aa21.86■■□□□ 1.09
LRRC56-201ENST00000270115 CENPJQ9HC77 1338 aaPredicted RBP21.85■■□□□ 1.09
LRRC56-201ENST00000270115 CCDC144AA2RUR9 1427 aa21.85■■□□□ 1.09
LRRC56-201ENST00000270115 AMER1Q5JTC6 1135 aaPredicted RBP21.84■■□□□ 1.09
LRRC56-201ENST00000270115 TNNQ9UQP3 1299 aa21.84■■□□□ 1.09
LRRC56-201ENST00000270115 MAGI2Q86UL8 1455 aa21.84■■□□□ 1.09
LRRC56-201ENST00000270115 MFAP1P55081 439 aaKnown RBP21.84■■□□□ 1.09
LRRC56-201ENST00000270115 TTC37Q6PGP7 1564 aa21.83■■□□□ 1.08
LRRC56-201ENST00000270115 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.82■■□□□ 1.08
LRRC56-201ENST00000270115 CROCC2H7BZ55 1655 aa21.82■■□□□ 1.08
LRRC56-201ENST00000270115 GPRASP1Q5JY77 1395 aa21.82■■□□□ 1.08
LRRC56-201ENST00000270115 CDC42BPBQ9Y5S2 1711 aa21.82■■□□□ 1.08
LRRC56-201ENST00000270115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.81■■□□□ 1.08
LRRC56-201ENST00000270115 PMFBP1Q8TBY8 1022 aa21.81■■□□□ 1.08
LRRC56-201ENST00000270115 C22orf23Q9BZE7 217 aa21.81■■□□□ 1.08
LRRC56-201ENST00000270115 GAS2L3Q86XJ1 694 aa21.8■■□□□ 1.08
LRRC56-201ENST00000270115 BCL2L13Q9BXK5 485 aa21.8■■□□□ 1.08
LRRC56-201ENST00000270115 SAMD9LQ8IVG5 1584 aa21.8■■□□□ 1.08
LRRC56-201ENST00000270115 NEUROD2Q15784 382 aa21.79■■□□□ 1.08
LRRC56-201ENST00000270115 RLBP1P12271 317 aa21.79■■□□□ 1.08
LRRC56-201ENST00000270115 ZCCHC11Q5TAX3 1644 aaKnown RBP21.77■■□□□ 1.08
LRRC56-201ENST00000270115 DDX11L8A8MPP1 907 aa21.77■■□□□ 1.08
LRRC56-201ENST00000270115 OSCARQ8IYS5 282 aa21.77■■□□□ 1.08
LRRC56-201ENST00000270115 ARHGAP5Q13017 1502 aa21.77■■□□□ 1.08
LRRC56-201ENST00000270115 A2MP01023 1474 aa21.77■■□□□ 1.08
LRRC56-201ENST00000270115 KIAA1211Q6ZU35 1233 aa21.77■■□□□ 1.08
LRRC56-201ENST00000270115 PRDM15P57071 1507 aaPredicted RBP21.77■■□□□ 1.07
LRRC56-201ENST00000270115 TPM2P07951 284 aa21.76■■□□□ 1.07
LRRC56-201ENST00000270115 PDCL3Q9H2J4 239 aa21.76■■□□□ 1.07
LRRC56-201ENST00000270115 PREX2Q70Z35 1606 aa21.75■■□□□ 1.07
LRRC56-201ENST00000270115 WDR7Q9Y4E6 1490 aa21.75■■□□□ 1.07
LRRC56-201ENST00000270115 HSCBQ8IWL3 235 aa21.74■■□□□ 1.07
LRRC56-201ENST00000270115 RBM10P98175 930 aaKnown RBP21.74■■□□□ 1.07
LRRC56-201ENST00000270115 UHRF1BP1LA0JNW5 1464 aa21.74■■□□□ 1.07
LRRC56-201ENST00000270115 SYCP2Q9BX26 1530 aa21.73■■□□□ 1.07
LRRC56-201ENST00000270115 RRP7AQ9Y3A4 280 aaKnown RBP21.72■■□□□ 1.07
LRRC56-201ENST00000270115 RWDD1Q9H446 243 aaPredicted RBP21.72■■□□□ 1.07
LRRC56-201ENST00000270115 SHANK2Q9UPX8 1470 aa21.72■■□□□ 1.07
LRRC56-201ENST00000270115 WWC1Q8IX03 1113 aa21.71■■□□□ 1.07
LRRC56-201ENST00000270115 ZNF692Q9BU19 519 aaPredicted RBP21.71■■□□□ 1.07
LRRC56-201ENST00000270115 FAM135AQ9P2D6 1515 aa21.71■■□□□ 1.07
LRRC56-201ENST00000270115 RARSP54136 660 aaKnown RBP21.7■■□□□ 1.07
LRRC56-201ENST00000270115 TNPO1Q92973 898 aaKnown RBP21.7■■□□□ 1.07
LRRC56-201ENST00000270115 CCDC141Q6ZP82 1450 aa21.7■■□□□ 1.07
LRRC56-201ENST00000270115 NINLQ9Y2I6 1382 aa21.69■■□□□ 1.06
LRRC56-201ENST00000270115 PIK3C2GO75747 1445 aa21.69■■□□□ 1.06
LRRC56-201ENST00000270115 ISY1Q9ULR0 285 aaKnown RBP21.69■■□□□ 1.06
LRRC56-201ENST00000270115 ARHGEF5Q12774 1597 aa21.68■■□□□ 1.06
LRRC56-201ENST00000270115 RSPH4AQ5TD94 716 aa21.68■■□□□ 1.06
LRRC56-201ENST00000270115 FOXD4L1Q9NU39 408 aa21.68■■□□□ 1.06
LRRC56-201ENST00000270115 PODXL2Q9NZ53 605 aa21.68■■□□□ 1.06
LRRC56-201ENST00000270115 PLA2R1Q13018 1463 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms