RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 ROCK2O75116 1388 aaKnown RBP13.54□□□□□ -0.24
CHFR-201ENST00000266880 PLEKHD1A6NEE1 506 aa13.54□□□□□ -0.24
CHFR-201ENST00000266880 TMX4Q9H1E5 349 aaPredicted RBP13.54□□□□□ -0.24
CHFR-201ENST00000266880 ODF2Q5BJF6 829 aa13.54□□□□□ -0.24
CHFR-201ENST00000266880 TRIM29Q14134 588 aa13.54□□□□□ -0.24
CHFR-201ENST00000266880 PAK3O75914 559 aaPredicted RBP13.53□□□□□ -0.24
CHFR-201ENST00000266880 BAZ1BQ9UIG0 1483 aaKnown RBP13.53□□□□□ -0.24
CHFR-201ENST00000266880 CRBNQ96SW2 442 aa13.53□□□□□ -0.24
CHFR-201ENST00000266880 EEA1Q15075 1411 aa13.53□□□□□ -0.24
CHFR-201ENST00000266880 HDGFL2Q7Z4V5 671 aaPredicted RBP13.53□□□□□ -0.24
CHFR-201ENST00000266880 FRAT2O75474 233 aaPredicted RBP13.53□□□□□ -0.24
CHFR-201ENST00000266880 G3V3G9 751 aa13.52□□□□□ -0.24
CHFR-201ENST00000266880 DCAF8Q5TAQ9 597 aa13.52□□□□□ -0.24
CHFR-201ENST00000266880 SMC2O95347 1197 aa13.52□□□□□ -0.24
CHFR-201ENST00000266880 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.52□□□□□ -0.24
CHFR-201ENST00000266880 CSB-PGBD3P0DP91 1061 aa13.52□□□□□ -0.24
CHFR-201ENST00000266880 CHMP7Q8WUX9 453 aaPredicted RBP13.52□□□□□ -0.24
CHFR-201ENST00000266880 CCDC47Q96A33 483 aaKnown RBP13.52□□□□□ -0.24
CHFR-201ENST00000266880 DEF6Q9H4E7 631 aa13.52□□□□□ -0.24
CHFR-201ENST00000266880 IBSPP21815 317 aaPredicted RBP13.52□□□□□ -0.25
CHFR-201ENST00000266880 RRP7AQ9Y3A4 280 aaKnown RBP13.52□□□□□ -0.25
CHFR-201ENST00000266880 RAD21O60216 631 aa13.52□□□□□ -0.25
CHFR-201ENST00000266880 EPS15P42566 896 aa13.52□□□□□ -0.25
CHFR-201ENST00000266880 INCENPQ9NQS7 918 aa13.52□□□□□ -0.25
CHFR-201ENST00000266880 SYNE3Q6ZMZ3 975 aa13.51□□□□□ -0.25
CHFR-201ENST00000266880 ZFYVE27Q5T4F4 411 aa13.51□□□□□ -0.25
CHFR-201ENST00000266880 GIMAP7Q8NHV1 300 aa13.51□□□□□ -0.25
CHFR-201ENST00000266880 CGNL1Q0VF96 1302 aa13.51□□□□□ -0.25
CHFR-201ENST00000266880 FAM193AP78312 1265 aa13.51□□□□□ -0.25
CHFR-201ENST00000266880 CCDC73Q6ZRK6 1079 aa13.51□□□□□ -0.25
CHFR-201ENST00000266880 EXOC6Q8TAG9 804 aa13.51□□□□□ -0.25
CHFR-201ENST00000266880 FOXD1Q16676 465 aa13.51□□□□□ -0.25
CHFR-201ENST00000266880 CHMP5Q9NZZ3 219 aa13.51□□□□□ -0.25
CHFR-201ENST00000266880 MYO6Q9UM54 1294 aa13.51□□□□□ -0.25
CHFR-201ENST00000266880 UQCRHLA0A096LP55 91 aa13.5□□□□□ -0.25
CHFR-201ENST00000266880 UQCRHP07919 91 aa13.5□□□□□ -0.25
CHFR-201ENST00000266880 ENOX2Q16206 610 aaKnown RBP13.5□□□□□ -0.25
CHFR-201ENST00000266880 PRDM10Q9NQV6 1147 aa13.5□□□□□ -0.25
CHFR-201ENST00000266880 CPLX1O14810 134 aa13.5□□□□□ -0.25
CHFR-201ENST00000266880 CCDC173Q0VFZ6 552 aa13.5□□□□□ -0.25
CHFR-201ENST00000266880 OLFM4Q6UX06 510 aa13.49□□□□□ -0.25
CHFR-201ENST00000266880 TNNT1P13805 278 aa13.49□□□□□ -0.25
CHFR-201ENST00000266880 KANK1Q14678 1352 aa13.49□□□□□ -0.25
CHFR-201ENST00000266880 TRIM5Q9C035 493 aa13.49□□□□□ -0.25
CHFR-201ENST00000266880 NFKBIBQ15653 356 aa13.48□□□□□ -0.25
CHFR-201ENST00000266880 SPC24Q8NBT2 197 aa13.48□□□□□ -0.25
CHFR-201ENST00000266880 BCL2L13Q9BXK5 485 aa13.48□□□□□ -0.25
CHFR-201ENST00000266880 MRE11P49959 708 aa13.48□□□□□ -0.25
CHFR-201ENST00000266880 GOLGA6L10A6NI86 522 aa13.48□□□□□ -0.25
CHFR-201ENST00000266880 MPNDQ8N594 471 aa13.48□□□□□ -0.25
CHFR-201ENST00000266880 GPATCH11Q8N954 259 aa13.47□□□□□ -0.25
CHFR-201ENST00000266880 NFXL1Q6ZNB6 911 aa13.47□□□□□ -0.25
CHFR-201ENST00000266880 NAT10Q9H0A0 1025 aaKnown RBP13.47□□□□□ -0.25
CHFR-201ENST00000266880 CLASRPQ8N2M8 674 aaKnown RBP13.47□□□□□ -0.25
CHFR-201ENST00000266880 REC8O95072 547 aa13.47□□□□□ -0.25
CHFR-201ENST00000266880 CAVIN1Q6NZI2 390 aaKnown RBP13.47□□□□□ -0.25
CHFR-201ENST00000266880 OFD1O75665 1012 aa13.47□□□□□ -0.25
CHFR-201ENST00000266880 TSPY26PQ9H489 355 aa13.47□□□□□ -0.25
CHFR-201ENST00000266880 SMC3Q9UQE7 1217 aa13.47□□□□□ -0.25
CHFR-201ENST00000266880 CHMP4CQ96CF2 233 aa13.46□□□□□ -0.25
CHFR-201ENST00000266880 NEXNQ0ZGT2 675 aa13.46□□□□□ -0.25
CHFR-201ENST00000266880 HDAC5Q9UQL6 1122 aa13.46□□□□□ -0.25
CHFR-201ENST00000266880 ANKRD62A6NC57 917 aa13.46□□□□□ -0.25
CHFR-201ENST00000266880 RRP1P56182 461 aaKnown RBP13.46□□□□□ -0.25
CHFR-201ENST00000266880 ZHX1Q9UKY1 873 aaPredicted RBP13.46□□□□□ -0.25
CHFR-201ENST00000266880 CCNB3Q8WWL7 1395 aa13.46□□□□□ -0.25
CHFR-201ENST00000266880 GOLGA6L7A0A1B0GV03 622 aa13.45□□□□□ -0.26
CHFR-201ENST00000266880 CCAR1Q8IX12 1150 aaKnown RBP13.45□□□□□ -0.26
CHFR-201ENST00000266880 TICAM2Q86XR7 235 aa13.45□□□□□ -0.26
CHFR-201ENST00000266880 CCDC43Q96MW1 224 aaKnown RBP13.45□□□□□ -0.26
CHFR-201ENST00000266880 DHX16O60231 1041 aaKnown RBP13.45□□□□□ -0.26
CHFR-201ENST00000266880 HMGN5P82970 282 aaKnown RBP13.44□□□□□ -0.26
CHFR-201ENST00000266880 KDM4AO75164 1064 aa13.44□□□□□ -0.26
CHFR-201ENST00000266880 LMOD3Q0VAK6 560 aa13.44□□□□□ -0.26
CHFR-201ENST00000266880 PSMD1Q99460 953 aa13.44□□□□□ -0.26
CHFR-201ENST00000266880 SEPT7Q16181 437 aaKnown RBP13.44□□□□□ -0.26
CHFR-201ENST00000266880 ZKSCAN1P17029 563 aaPredicted RBP13.43□□□□□ -0.26
CHFR-201ENST00000266880 NUCB2P80303 420 aa13.43□□□□□ -0.26
CHFR-201ENST00000266880 RUFY2Q8WXA3 655 aa13.43□□□□□ -0.26
CHFR-201ENST00000266880 TRIM34Q9BYJ4 488 aa13.43□□□□□ -0.26
CHFR-201ENST00000266880 CCP110O43303 1012 aa13.43□□□□□ -0.26
CHFR-201ENST00000266880 USP8P40818 1118 aa13.43□□□□□ -0.26
CHFR-201ENST00000266880 PDE3BQ13370 1112 aa13.43□□□□□ -0.26
CHFR-201ENST00000266880 CCDC27Q2M243 656 aa13.43□□□□□ -0.26
CHFR-201ENST00000266880 SETD5Q9C0A6 1442 aa13.43□□□□□ -0.26
CHFR-201ENST00000266880 ERLIN2O94905 339 aa13.43□□□□□ -0.26
CHFR-201ENST00000266880 CPLX2Q6PUV4 134 aaKnown RBP13.43□□□□□ -0.26
CHFR-201ENST00000266880 TAX1BP1Q86VP1 789 aa13.43□□□□□ -0.26
CHFR-201ENST00000266880 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.42□□□□□ -0.26
CHFR-201ENST00000266880 SSR1P43307 286 aaKnown RBP13.42□□□□□ -0.26
CHFR-201ENST00000266880 LTV1Q96GA3 475 aaPredicted RBP13.42□□□□□ -0.26
CHFR-201ENST00000266880 COG6Q9Y2V7 657 aa13.41□□□□□ -0.26
CHFR-201ENST00000266880 CTDP1Q9Y5B0 961 aaPredicted RBP13.41□□□□□ -0.26
CHFR-201ENST00000266880 TRERF1Q96PN7 1200 aa13.41□□□□□ -0.26
CHFR-201ENST00000266880 BRPF1P55201 1214 aaPredicted RBP13.41□□□□□ -0.26
CHFR-201ENST00000266880 RSPH4AQ5TD94 716 aa13.41□□□□□ -0.26
CHFR-201ENST00000266880 C22orf23Q9BZE7 217 aa13.4□□□□□ -0.26
CHFR-201ENST00000266880 EIF3AQ14152 1382 aaKnown RBP13.4□□□□□ -0.26
CHFR-201ENST00000266880 IPO4Q8TEX9 1081 aaKnown RBP13.4□□□□□ -0.26
CHFR-201ENST00000266880 TRAK2O60296 914 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms