RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 STAG3Q9UJ98 1225 aa20.77■□□□□ 0.92
SSBP1-201ENST00000265304 POLR1AO95602 1720 aaPredicted RBP20.77■□□□□ 0.92
SSBP1-201ENST00000265304 HDGFP51858 240 aaKnown RBP20.76■□□□□ 0.91
SSBP1-201ENST00000265304 TIMELESSQ9UNS1 1208 aa20.76■□□□□ 0.91
SSBP1-201ENST00000265304 RIMS2Q9UQ26 1411 aa20.76■□□□□ 0.91
SSBP1-201ENST00000265304 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.75■□□□□ 0.91
SSBP1-201ENST00000265304 CCER1Q8TC90 406 aaPredicted RBP20.75■□□□□ 0.91
SSBP1-201ENST00000265304 LTKP29376 864 aa20.74■□□□□ 0.91
SSBP1-201ENST00000265304 ANKLE2Q86XL3 938 aa20.74■□□□□ 0.91
SSBP1-201ENST00000265304 SCAF11Q99590 1463 aaKnown RBP20.74■□□□□ 0.91
SSBP1-201ENST00000265304 HSPA2P54652 639 aa20.73■□□□□ 0.91
SSBP1-201ENST00000265304 NRXN1Q9ULB1 1477 aa20.73■□□□□ 0.91
SSBP1-201ENST00000265304 CHGAP10645 457 aaKnown RBP20.72■□□□□ 0.91
SSBP1-201ENST00000265304 MYOM2P54296 1465 aa20.72■□□□□ 0.91
SSBP1-201ENST00000265304 VGFO15240 615 aaPredicted RBP20.7■□□□□ 0.9
SSBP1-201ENST00000265304 TXNDC2Q86VQ3 553 aa20.7■□□□□ 0.9
SSBP1-201ENST00000265304 EID1Q9Y6B2 187 aa20.7■□□□□ 0.9
SSBP1-201ENST00000265304 PLEKHG1Q9ULL1 1385 aa20.7■□□□□ 0.9
SSBP1-201ENST00000265304 RGL3Q3MIN7 710 aa20.69■□□□□ 0.9
SSBP1-201ENST00000265304 SETBP1Q9Y6X0 1596 aa20.68■□□□□ 0.9
SSBP1-201ENST00000265304 ZNF326Q5BKZ1 582 aaKnown RBP20.68■□□□□ 0.9
SSBP1-201ENST00000265304 L3MBTL2Q969R5 705 aa20.68■□□□□ 0.9
SSBP1-201ENST00000265304 NEUROD1Q13562 356 aa20.66■□□□□ 0.9
SSBP1-201ENST00000265304 NRXN3Q9Y4C0 1643 aa20.66■□□□□ 0.9
SSBP1-201ENST00000265304 IQGAP1P46940 1657 aa20.65■□□□□ 0.9
SSBP1-201ENST00000265304 NPHP4O75161 1426 aaPredicted RBP20.64■□□□□ 0.89
SSBP1-201ENST00000265304 PIK3C2GO75747 1445 aa20.64■□□□□ 0.89
SSBP1-201ENST00000265304 NCKAP5LQ9HCH0 1330 aa20.64■□□□□ 0.89
SSBP1-201ENST00000265304 ADGRF5Q8IZF2 1346 aa20.63■□□□□ 0.89
SSBP1-201ENST00000265304 DCAF11Q8TEB1 546 aa20.63■□□□□ 0.89
SSBP1-201ENST00000265304 DMRT2Q9Y5R5 561 aa20.63■□□□□ 0.89
SSBP1-201ENST00000265304 SETD1AO15047 1707 aaKnown RBP20.63■□□□□ 0.89
SSBP1-201ENST00000265304 ADAMTS13Q76LX8 1427 aa20.62■□□□□ 0.89
SSBP1-201ENST00000265304 KIAA1210Q9ULL0 1709 aa20.62■□□□□ 0.89
SSBP1-201ENST00000265304 DIP2AQ14689 1571 aa20.62■□□□□ 0.89
SSBP1-201ENST00000265304 TBX22Q9Y458 520 aa20.61■□□□□ 0.89
SSBP1-201ENST00000265304 TONSLQ96HA7 1378 aa20.6■□□□□ 0.89
SSBP1-201ENST00000265304 PRAG1Q86YV5 1406 aa20.6■□□□□ 0.89
SSBP1-201ENST00000265304 LAMC1P11047 1609 aa20.59■□□□□ 0.89
SSBP1-201ENST00000265304 ALKQ9UM73 1620 aa20.58■□□□□ 0.89
SSBP1-201ENST00000265304 C14orf93Q9H972 538 aaKnown RBP20.58■□□□□ 0.89
SSBP1-201ENST00000265304 PIK3R4Q99570 1358 aa20.58■□□□□ 0.88
SSBP1-201ENST00000265304 PPP1R15AO75807 674 aaPredicted RBP20.57■□□□□ 0.88
SSBP1-201ENST00000265304 NUTM2DQ5VT03 806 aaPredicted RBP20.57■□□□□ 0.88
SSBP1-201ENST00000265304 CHD2O14647 1828 aaKnown RBP20.56■□□□□ 0.88
SSBP1-201ENST00000265304 KDM2AQ9Y2K7 1162 aa20.53■□□□□ 0.88
SSBP1-201ENST00000265304 TRPM1Q7Z4N2 1603 aa20.53■□□□□ 0.88
SSBP1-201ENST00000265304 ADGRB1O14514 1584 aa20.51■□□□□ 0.87
SSBP1-201ENST00000265304 NBPF8Q3BBV2 869 aa20.51■□□□□ 0.87
SSBP1-201ENST00000265304 ASXL1Q8IXJ9 1541 aa20.5■□□□□ 0.87
SSBP1-201ENST00000265304 SLC26A8Q96RN1 970 aa20.49■□□□□ 0.87
SSBP1-201ENST00000265304 NWD1Q149M9 1564 aa20.49■□□□□ 0.87
SSBP1-201ENST00000265304 METP08581 1390 aa20.48■□□□□ 0.87
SSBP1-201ENST00000265304 GPRASP1Q5JY77 1395 aa20.48■□□□□ 0.87
SSBP1-201ENST00000265304 CFAP70Q5T0N1 1121 aa20.48■□□□□ 0.87
SSBP1-201ENST00000265304 XRN1Q8IZH2 1706 aaKnown RBP20.47■□□□□ 0.87
SSBP1-201ENST00000265304 STRCP1A6NGW2 1772 aa20.47■□□□□ 0.87
SSBP1-201ENST00000265304 RALGAPBQ86X10 1494 aa20.46■□□□□ 0.87
SSBP1-201ENST00000265304 ABCC11Q96J66 1382 aa20.46■□□□□ 0.87
SSBP1-201ENST00000265304 TECPR2O15040 1411 aa20.45■□□□□ 0.86
SSBP1-201ENST00000265304 PTPRUQ92729 1446 aa20.45■□□□□ 0.86
SSBP1-201ENST00000265304 KCNA6P17658 529 aa20.45■□□□□ 0.86
SSBP1-201ENST00000265304 KNDC1Q76NI1 1749 aa20.44■□□□□ 0.86
SSBP1-201ENST00000265304 SIRT1Q96EB6 747 aa20.44■□□□□ 0.86
SSBP1-201ENST00000265304 LRPPRCP42704 1394 aaKnown RBP20.44■□□□□ 0.86
SSBP1-201ENST00000265304 LTBP4Q8N2S1 1624 aa20.42■□□□□ 0.86
SSBP1-201ENST00000265304 BCANQ96GW7 911 aa20.42■□□□□ 0.86
SSBP1-201ENST00000265304 NBPF1Q3BBV0 1214 aa20.41■□□□□ 0.86
SSBP1-201ENST00000265304 YTHDC2Q9H6S0 1430 aaKnown RBP20.41■□□□□ 0.86
SSBP1-201ENST00000265304 NKTRP30414 1462 aaKnown RBP20.41■□□□□ 0.86
SSBP1-201ENST00000265304 DLC1Q96QB1 1528 aa20.41■□□□□ 0.86
SSBP1-201ENST00000265304 PTCH1Q13635 1447 aa20.39■□□□□ 0.85
SSBP1-201ENST00000265304 TMEM132EQ6IEE7 984 aa20.39■□□□□ 0.85
SSBP1-201ENST00000265304 CPS1P31327 1500 aa20.38■□□□□ 0.85
SSBP1-201ENST00000265304 AMOTL2Q9Y2J4 779 aa20.38■□□□□ 0.85
SSBP1-201ENST00000265304 FAM135BQ49AJ0 1406 aa20.37■□□□□ 0.85
SSBP1-201ENST00000265304 ZNF335Q9H4Z2 1342 aaPredicted RBP20.37■□□□□ 0.85
SSBP1-201ENST00000265304 NCOA3Q9Y6Q9 1424 aa20.36■□□□□ 0.85
SSBP1-201ENST00000265304 ZEB1P37275 1124 aaPredicted RBP20.36■□□□□ 0.85
SSBP1-201ENST00000265304 XIRP1Q702N8 1843 aaKnown RBP20.36■□□□□ 0.85
SSBP1-201ENST00000265304 ARHGEF28Q8N1W1 1705 aaKnown RBP20.35■□□□□ 0.85
SSBP1-201ENST00000265304 ROCK2O75116 1388 aaKnown RBP20.34■□□□□ 0.85
SSBP1-201ENST00000265304 ROBO2Q9HCK4 1378 aa20.33■□□□□ 0.84
SSBP1-201ENST00000265304 LRRC7Q96NW7 1537 aa20.32■□□□□ 0.84
SSBP1-201ENST00000265304 CARD11Q9BXL7 1154 aa20.29■□□□□ 0.84
SSBP1-201ENST00000265304 IQSEC2Q5JU85 1478 aa20.29■□□□□ 0.84
SSBP1-201ENST00000265304 PROSER2Q86WR7 435 aaPredicted RBP20.26■□□□□ 0.83
SSBP1-201ENST00000265304 STK26Q9P289 416 aa20.26■□□□□ 0.83
SSBP1-201ENST00000265304 TRAK1Q9UPV9 953 aa20.26■□□□□ 0.83
SSBP1-201ENST00000265304 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.26■□□□□ 0.83
SSBP1-201ENST00000265304 SBNO2Q9Y2G9 1366 aa20.25■□□□□ 0.83
SSBP1-201ENST00000265304 TMEM94Q12767 1356 aa20.24■□□□□ 0.83
SSBP1-201ENST00000265304 ADGRB2O60241 1585 aa20.23■□□□□ 0.83
SSBP1-201ENST00000265304 EIF3AQ14152 1382 aaKnown RBP20.22■□□□□ 0.83
SSBP1-201ENST00000265304 PLEKHH1Q9ULM0 1364 aa20.22■□□□□ 0.83
SSBP1-201ENST00000265304 NALCNQ8IZF0 1738 aa20.22■□□□□ 0.83
SSBP1-201ENST00000265304 ADGRL3Q9HAR2 1447 aa20.22■□□□□ 0.83
SSBP1-201ENST00000265304 WAPLQ7Z5K2 1190 aa20.22■□□□□ 0.83
SSBP1-201ENST00000265304 PRAM1Q96QH2 718 aa20.22■□□□□ 0.83
SSBP1-201ENST00000265304 DCCP43146 1447 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms