RNA–Protein interactions for RNA: ENST00000263578.9

FOXRED1-201, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FOXRED1, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-201ENST00000263578 CHGAP10645 457 aaKnown RBP21.77■■□□□ 1.08
FOXRED1-201ENST00000263578 SCAF11Q99590 1463 aaKnown RBP21.75■■□□□ 1.07
FOXRED1-201ENST00000263578 ADGRF5Q8IZF2 1346 aa21.74■■□□□ 1.07
FOXRED1-201ENST00000263578 ERVK-7P63135 1459 aa21.74■■□□□ 1.07
FOXRED1-201ENST00000263578 POLR3GLQ9BT43 218 aa21.74■■□□□ 1.07
FOXRED1-201ENST00000263578 RPGRIP1LQ68CZ1 1315 aa21.74■■□□□ 1.07
FOXRED1-201ENST00000263578 SLC52A1Q9NWF4 448 aa21.72■■□□□ 1.07
FOXRED1-201ENST00000263578 MYO5BQ9ULV0 1848 aa21.71■■□□□ 1.07
FOXRED1-201ENST00000263578 NEXMIFQ5QGS0 1516 aa21.71■■□□□ 1.07
FOXRED1-201ENST00000263578 TESK2Q96S53 571 aa21.7■■□□□ 1.07
FOXRED1-201ENST00000263578 PIK3C2GO75747 1445 aa21.7■■□□□ 1.06
FOXRED1-201ENST00000263578 TMEM131LA2VDJ0 1609 aa21.7■■□□□ 1.06
FOXRED1-201ENST00000263578 SETBP1Q9Y6X0 1596 aa21.69■■□□□ 1.06
FOXRED1-201ENST00000263578 SPATA31D1Q6ZQQ2 1576 aa21.68■■□□□ 1.06
FOXRED1-201ENST00000263578 EIF3AQ14152 1382 aaKnown RBP21.68■■□□□ 1.06
FOXRED1-201ENST00000263578 IDI1Q13907 227 aa21.68■■□□□ 1.06
FOXRED1-201ENST00000263578 MLECQ14165 292 aa21.67■■□□□ 1.06
FOXRED1-201ENST00000263578 CFAP70Q5T0N1 1121 aa21.67■■□□□ 1.06
FOXRED1-201ENST00000263578 DISP3Q9P2K9 1392 aa21.66■■□□□ 1.06
FOXRED1-201ENST00000263578 PRKRIP1Q9H875 184 aaPredicted RBP21.65■■□□□ 1.06
FOXRED1-201ENST00000263578 FBXO31Q5XUX0 539 aaPredicted RBP21.65■■□□□ 1.06
FOXRED1-201ENST00000263578 TMF1P82094 1093 aa21.64■■□□□ 1.05
FOXRED1-201ENST00000263578 TRHP20396 242 aaPredicted RBP21.63■■□□□ 1.05
FOXRED1-201ENST00000263578 MYO3AQ8NEV4 1616 aa21.62■■□□□ 1.05
FOXRED1-201ENST00000263578 ZFYVE9O95405 1425 aa21.61■■□□□ 1.05
FOXRED1-201ENST00000263578 ADGRB1O14514 1584 aa21.61■■□□□ 1.05
FOXRED1-201ENST00000263578 VGFO15240 615 aaPredicted RBP21.6■■□□□ 1.05
FOXRED1-201ENST00000263578 ESF1Q9H501 851 aaKnown RBP21.6■■□□□ 1.05
FOXRED1-201ENST00000263578 C14orf93Q9H972 538 aaKnown RBP21.59■■□□□ 1.05
FOXRED1-201ENST00000263578 ZMYM3Q14202 1370 aa21.57■■□□□ 1.04
FOXRED1-201ENST00000263578 KDM5AP29375 1690 aaKnown RBP21.55■■□□□ 1.04
FOXRED1-201ENST00000263578 CDCA8Q53HL2 280 aa21.54■■□□□ 1.04
FOXRED1-201ENST00000263578 NUTM2DQ5VT03 806 aaPredicted RBP21.54■■□□□ 1.04
FOXRED1-201ENST00000263578 A2ML1A8K2U0 1454 aa21.53■■□□□ 1.04
FOXRED1-201ENST00000263578 QRICH2Q9H0J4 1663 aa21.52■■□□□ 1.04
FOXRED1-201ENST00000263578 SLC24A1O60721 1099 aa21.52■■□□□ 1.04
FOXRED1-201ENST00000263578 STAG3Q9UJ98 1225 aa21.52■■□□□ 1.04
FOXRED1-201ENST00000263578 SBNO2Q9Y2G9 1366 aa21.52■■□□□ 1.04
FOXRED1-201ENST00000263578 DNAJC5Q9H3Z4 198 aa21.51■■□□□ 1.03
FOXRED1-201ENST00000263578 MYOM1P52179 1685 aa21.51■■□□□ 1.03
FOXRED1-201ENST00000263578 ARHGEF28Q8N1W1 1705 aaKnown RBP21.51■■□□□ 1.03
FOXRED1-201ENST00000263578 KTN1Q86UP2 1357 aaKnown RBP21.5■■□□□ 1.03
FOXRED1-201ENST00000263578 ASXL1Q8IXJ9 1541 aa21.48■■□□□ 1.03
FOXRED1-201ENST00000263578 SCAF1Q9H7N4 1312 aaKnown RBP21.48■■□□□ 1.03
FOXRED1-201ENST00000263578 CENPJQ9HC77 1338 aaPredicted RBP21.48■■□□□ 1.03
FOXRED1-201ENST00000263578 TNRQ92752 1358 aa21.48■■□□□ 1.03
FOXRED1-201ENST00000263578 FER1L4A9Z1Z3 1794 aa21.47■■□□□ 1.03
FOXRED1-201ENST00000263578 CCDC184Q52MB2 194 aa21.47■■□□□ 1.03
FOXRED1-201ENST00000263578 TMEM132EQ6IEE7 984 aa21.47■■□□□ 1.03
FOXRED1-201ENST00000263578 MRS2Q9HD23 443 aa21.47■■□□□ 1.03
FOXRED1-201ENST00000263578 TRAK1Q9UPV9 953 aa21.47■■□□□ 1.03
FOXRED1-201ENST00000263578 RIMS2Q9UQ26 1411 aa21.45■■□□□ 1.02
FOXRED1-201ENST00000263578 PER1O15534 1290 aaPredicted RBP21.45■■□□□ 1.02
FOXRED1-201ENST00000263578 CNGB1Q14028 1251 aaPredicted RBP21.45■■□□□ 1.02
FOXRED1-201ENST00000263578 PELP1Q8IZL8 1130 aaKnown RBP21.45■■□□□ 1.02
FOXRED1-201ENST00000263578 PANK3Q9H999 370 aa21.45■■□□□ 1.02
FOXRED1-201ENST00000263578 ALKQ9UM73 1620 aa21.44■■□□□ 1.02
FOXRED1-201ENST00000263578 RALBP1Q15311 655 aa21.43■■□□□ 1.02
FOXRED1-201ENST00000263578 C3P01024 1663 aa21.43■■□□□ 1.02
FOXRED1-201ENST00000263578 UBR1Q8IWV7 1749 aa21.42■■□□□ 1.02
FOXRED1-201ENST00000263578 PARD3Q8TEW0 1356 aa21.41■■□□□ 1.02
FOXRED1-201ENST00000263578 SETD1AO15047 1707 aaKnown RBP21.4■■□□□ 1.02
FOXRED1-201ENST00000263578 MYBBP1AQ9BQG0 1328 aaKnown RBP21.39■■□□□ 1.02
FOXRED1-201ENST00000263578 GTF3C3Q9Y5Q9 886 aa21.39■■□□□ 1.01
FOXRED1-201ENST00000263578 NLRP1Q9C000 1473 aa21.38■■□□□ 1.01
FOXRED1-201ENST00000263578 YTHDC2Q9H6S0 1430 aaKnown RBP21.37■■□□□ 1.01
FOXRED1-201ENST00000263578 NRXN3Q9Y4C0 1643 aa21.37■■□□□ 1.01
FOXRED1-201ENST00000263578 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.36■■□□□ 1.01
FOXRED1-201ENST00000263578 BRD4O60885 1362 aaPredicted RBP21.36■■□□□ 1.01
FOXRED1-201ENST00000263578 PTPRMP28827 1452 aa21.36■■□□□ 1.01
FOXRED1-201ENST00000263578 SENP3Q9H4L4 574 aaPredicted RBP21.36■■□□□ 1.01
FOXRED1-201ENST00000263578 FAM9BQ8IZU0 186 aa21.35■■□□□ 1.01
FOXRED1-201ENST00000263578 HNRNPUQ00839 825 aaKnown RBP eCLIP21.34■■□□□ 1.015e-6■□□□□ 10.2
FOXRED1-201ENST00000263578 TULP4Q9NRJ4 1543 aa21.34■■□□□ 1.01
FOXRED1-201ENST00000263578 KNSTRNQ9Y448 316 aa21.33■■□□□ 1.01
FOXRED1-201ENST00000263578 TMEM2Q9UHN6 1383 aa21.32■■□□□ 1
FOXRED1-201ENST00000263578 CC2D1BQ5T0F9 858 aaKnown RBP21.32■■□□□ 1
FOXRED1-201ENST00000263578 STK26Q9P289 416 aa21.32■■□□□ 1
FOXRED1-201ENST00000263578 CEBPAP49715 358 aaPredicted RBP21.31■■□□□ 1
FOXRED1-201ENST00000263578 HDGFP51858 240 aaKnown RBP21.31■■□□□ 1
FOXRED1-201ENST00000263578 TMC1Q8TDI8 760 aa21.31■■□□□ 1
FOXRED1-201ENST00000263578 NLRP13Q86W25 1043 aa21.3■■□□□ 1
FOXRED1-201ENST00000263578 DLC1Q96QB1 1528 aa21.3■■□□□ 1
FOXRED1-201ENST00000263578 EVC2Q86UK5 1308 aa21.3■■□□□ 1
FOXRED1-201ENST00000263578 NPC1L1Q9UHC9 1359 aa21.29■■□□□ 1
FOXRED1-201ENST00000263578 PUS7Q96PZ0 661 aaKnown RBP21.28■■□□□ 1
FOXRED1-201ENST00000263578 AMER1Q5JTC6 1135 aaPredicted RBP21.28■■□□□ 1
FOXRED1-201ENST00000263578 LRPPRCP42704 1394 aaKnown RBP21.27■■□□□ 1
FOXRED1-201ENST00000263578 RIMS1Q86UR5 1692 aaKnown RBP21.26■□□□□ 0.99
FOXRED1-201ENST00000263578 KNDC1Q76NI1 1749 aa21.26■□□□□ 0.99
FOXRED1-201ENST00000263578 PNISRQ8TF01 805 aaKnown RBP21.25■□□□□ 0.99
FOXRED1-201ENST00000263578 PRAM1Q96QH2 718 aa21.25■□□□□ 0.99
FOXRED1-201ENST00000263578 SAFB2Q14151 953 aaKnown RBP eCLIP21.25■□□□□ 0.991e-7■■□□□ 13.2
FOXRED1-201ENST00000263578 POGKQ9P215 609 aa21.24■□□□□ 0.99
FOXRED1-201ENST00000263578 SLIT1O75093 1534 aa21.23■□□□□ 0.99
FOXRED1-201ENST00000263578 ABCC11Q96J66 1382 aa21.22■□□□□ 0.99
FOXRED1-201ENST00000263578 USP32Q8NFA0 1604 aa21.22■□□□□ 0.99
FOXRED1-201ENST00000263578 ARHGAP23Q9P227 1491 aa21.21■□□□□ 0.99
FOXRED1-201ENST00000263578 METP08581 1390 aa21.21■□□□□ 0.99
FOXRED1-201ENST00000263578 PLEKHG1Q9ULL1 1385 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms