RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 ZNF335Q9H4Z2 1342 aaPredicted RBP18.14■□□□□ 0.49
CLNS1A-201ENST00000263309 SPHKAPQ2M3C7 1700 aa18.14■□□□□ 0.49
CLNS1A-201ENST00000263309 KDM5AP29375 1690 aaKnown RBP18.13■□□□□ 0.49
CLNS1A-201ENST00000263309 ADGRB3O60242 1522 aa18.13■□□□□ 0.49
CLNS1A-201ENST00000263309 SYNMO15061 1565 aa18.13■□□□□ 0.49
CLNS1A-201ENST00000263309 RIMS2Q9UQ26 1411 aa18.12■□□□□ 0.49
CLNS1A-201ENST00000263309 PIK3C2BO00750 1634 aa18.12■□□□□ 0.49
CLNS1A-201ENST00000263309 SCAF11Q99590 1463 aaKnown RBP18.11■□□□□ 0.49
CLNS1A-201ENST00000263309 NPHP4O75161 1426 aaPredicted RBP18.1■□□□□ 0.49
CLNS1A-201ENST00000263309 ANKRD30BQ9BXX2 1392 aa18.1■□□□□ 0.49
CLNS1A-201ENST00000263309 CCER1Q8TC90 406 aaPredicted RBP18.1■□□□□ 0.49
CLNS1A-201ENST00000263309 LTKP29376 864 aa18.09■□□□□ 0.49
CLNS1A-201ENST00000263309 NEUROD1Q13562 356 aa18.09■□□□□ 0.49
CLNS1A-201ENST00000263309 SLIT1O75093 1534 aa18.08■□□□□ 0.49
CLNS1A-201ENST00000263309 UBR1Q8IWV7 1749 aa18.08■□□□□ 0.48
CLNS1A-201ENST00000263309 NUTM2DQ5VT03 806 aaPredicted RBP18.07■□□□□ 0.48
CLNS1A-201ENST00000263309 KIF1BO60333 1816 aa18.07■□□□□ 0.48
CLNS1A-201ENST00000263309 UBAP1LF5GYI3 381 aa18.06■□□□□ 0.48
CLNS1A-201ENST00000263309 CLSPNQ9HAW4 1339 aa18.05■□□□□ 0.48
CLNS1A-201ENST00000263309 DCAF11Q8TEB1 546 aa18.05■□□□□ 0.48
CLNS1A-201ENST00000263309 TBX22Q9Y458 520 aa18.05■□□□□ 0.48
CLNS1A-201ENST00000263309 ARHGAP23Q9P227 1491 aa18.05■□□□□ 0.48
CLNS1A-201ENST00000263309 PLEKHG1Q9ULL1 1385 aa18.04■□□□□ 0.48
CLNS1A-201ENST00000263309 MED14O60244 1454 aa18.04■□□□□ 0.48
CLNS1A-201ENST00000263309 TMEM131LA2VDJ0 1609 aa18.04■□□□□ 0.48
CLNS1A-201ENST00000263309 SLC26A8Q96RN1 970 aa18.03■□□□□ 0.48
CLNS1A-201ENST00000263309 KDM2AQ9Y2K7 1162 aa18.03■□□□□ 0.48
CLNS1A-201ENST00000263309 DHX57Q6P158 1386 aaKnown RBP18.02■□□□□ 0.47
CLNS1A-201ENST00000263309 CLTCL1P53675 1640 aa18.01■□□□□ 0.47
CLNS1A-201ENST00000263309 TONSLQ96HA7 1378 aa17.99■□□□□ 0.47
CLNS1A-201ENST00000263309 POLR1AO95602 1720 aaPredicted RBP17.98■□□□□ 0.47
CLNS1A-201ENST00000263309 KCNA6P17658 529 aa17.98■□□□□ 0.47
CLNS1A-201ENST00000263309 TIMELESSQ9UNS1 1208 aa17.98■□□□□ 0.47
CLNS1A-201ENST00000263309 ZFYVE9O95405 1425 aa17.98■□□□□ 0.47
CLNS1A-201ENST00000263309 NEURL4Q96JN8 1562 aa17.97■□□□□ 0.47
CLNS1A-201ENST00000263309 PIK3R4Q99570 1358 aa17.96■□□□□ 0.47
CLNS1A-201ENST00000263309 C14orf37Q86TY3 774 aa17.96■□□□□ 0.47
CLNS1A-201ENST00000263309 PROSER2Q86WR7 435 aaPredicted RBP17.96■□□□□ 0.47
CLNS1A-201ENST00000263309 SIN3AQ96ST3 1273 aa17.96■□□□□ 0.47
CLNS1A-201ENST00000263309 IQGAP1P46940 1657 aa17.95■□□□□ 0.46
CLNS1A-201ENST00000263309 SPATA31E1Q6ZUB1 1445 aa17.95■□□□□ 0.46
CLNS1A-201ENST00000263309 CPS1P31327 1500 aa17.93■□□□□ 0.46
CLNS1A-201ENST00000263309 HSPA1LP34931 641 aa17.92■□□□□ 0.46
CLNS1A-201ENST00000263309 AMOTL2Q9Y2J4 779 aa17.92■□□□□ 0.46
CLNS1A-201ENST00000263309 L3MBTL2Q969R5 705 aa17.9■□□□□ 0.46
CLNS1A-201ENST00000263309 DIP2AQ14689 1571 aa17.9■□□□□ 0.46
CLNS1A-201ENST00000263309 ADGRF5Q8IZF2 1346 aa17.9■□□□□ 0.46
CLNS1A-201ENST00000263309 NEXMIFQ5QGS0 1516 aa17.89■□□□□ 0.45
CLNS1A-201ENST00000263309 TOM1O60784 492 aa17.89■□□□□ 0.45
CLNS1A-201ENST00000263309 C14orf93Q9H972 538 aaKnown RBP17.89■□□□□ 0.45
CLNS1A-201ENST00000263309 PIP4K2BP78356 416 aa17.87■□□□□ 0.45
CLNS1A-201ENST00000263309 MYO5BQ9ULV0 1848 aa17.86■□□□□ 0.45
CLNS1A-201ENST00000263309 MYOM2P54296 1465 aa17.86■□□□□ 0.45
CLNS1A-201ENST00000263309 MED1Q15648 1581 aaPredicted RBP17.85■□□□□ 0.45
CLNS1A-201ENST00000263309 CFAP70Q5T0N1 1121 aa17.85■□□□□ 0.45
CLNS1A-201ENST00000263309 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
CLNS1A-201ENST00000263309 POGKQ9P215 609 aa17.85■□□□□ 0.45
CLNS1A-201ENST00000263309 STK26Q9P289 416 aa17.85■□□□□ 0.45
CLNS1A-201ENST00000263309 ALKQ9UM73 1620 aa17.84■□□□□ 0.45
CLNS1A-201ENST00000263309 SETBP1Q9Y6X0 1596 aa17.84■□□□□ 0.45
CLNS1A-201ENST00000263309 ATF3P18847 181 aa17.84■□□□□ 0.45
CLNS1A-201ENST00000263309 ADAMTS13Q76LX8 1427 aa17.82■□□□□ 0.44
CLNS1A-201ENST00000263309 NCOA3Q9Y6Q9 1424 aa17.81■□□□□ 0.44
CLNS1A-201ENST00000263309 PPLO60437 1756 aa17.81■□□□□ 0.44
CLNS1A-201ENST00000263309 MSH6P52701 1360 aa17.81■□□□□ 0.44
CLNS1A-201ENST00000263309 SIRT1Q96EB6 747 aa17.81■□□□□ 0.44
CLNS1A-201ENST00000263309 C19orf44Q9H6X5 657 aa17.81■□□□□ 0.44
CLNS1A-201ENST00000263309 PIK3C2GO75747 1445 aa17.81■□□□□ 0.44
CLNS1A-201ENST00000263309 SLC24A1O60721 1099 aa17.8■□□□□ 0.44
CLNS1A-201ENST00000263309 TMEM132EQ6IEE7 984 aa17.8■□□□□ 0.44
CLNS1A-201ENST00000263309 CADPS2Q86UW7 1296 aa17.8■□□□□ 0.44
CLNS1A-201ENST00000263309 NKTRP30414 1462 aaKnown RBP17.8■□□□□ 0.44
CLNS1A-201ENST00000263309 METP08581 1390 aa17.79■□□□□ 0.44
CLNS1A-201ENST00000263309 LRPPRCP42704 1394 aaKnown RBP17.77■□□□□ 0.43
CLNS1A-201ENST00000263309 TMEM94Q12767 1356 aa17.77■□□□□ 0.43
CLNS1A-201ENST00000263309 ABCC11Q96J66 1382 aa17.77■□□□□ 0.43
CLNS1A-201ENST00000263309 TRAK1Q9UPV9 953 aa17.76■□□□□ 0.43
CLNS1A-201ENST00000263309 LRRC7Q96NW7 1537 aa17.76■□□□□ 0.43
CLNS1A-201ENST00000263309 ROCK2O75116 1388 aaKnown RBP17.76■□□□□ 0.43
CLNS1A-201ENST00000263309 LAMC1P11047 1609 aa17.76■□□□□ 0.43
CLNS1A-201ENST00000263309 NRXN1Q9ULB1 1477 aa17.75■□□□□ 0.43
CLNS1A-201ENST00000263309 YTHDC2Q9H6S0 1430 aaKnown RBP17.74■□□□□ 0.43
CLNS1A-201ENST00000263309 CARD11Q9BXL7 1154 aa17.74■□□□□ 0.43
CLNS1A-201ENST00000263309 EIF3AQ14152 1382 aaKnown RBP17.74■□□□□ 0.43
CLNS1A-201ENST00000263309 PRAG1Q86YV5 1406 aa17.72■□□□□ 0.43
CLNS1A-201ENST00000263309 IFT172Q9UG01 1749 aa17.72■□□□□ 0.43
CLNS1A-201ENST00000263309 PRAM1Q96QH2 718 aa17.71■□□□□ 0.43
CLNS1A-201ENST00000263309 STRCP1A6NGW2 1772 aa17.71■□□□□ 0.43
CLNS1A-201ENST00000263309 RBM33Q96EV2 1170 aaKnown RBP17.7■□□□□ 0.42
CLNS1A-201ENST00000263309 PTCH1Q13635 1447 aa17.7■□□□□ 0.42
CLNS1A-201ENST00000263309 CHD2O14647 1828 aaKnown RBP17.7■□□□□ 0.42
CLNS1A-201ENST00000263309 SLAIN2Q9P270 581 aa17.69■□□□□ 0.42
CLNS1A-201ENST00000263309 FAM135BQ49AJ0 1406 aa17.69■□□□□ 0.42
CLNS1A-201ENST00000263309 NWD1Q149M9 1564 aa17.68■□□□□ 0.42
CLNS1A-201ENST00000263309 WAPLQ7Z5K2 1190 aa17.68■□□□□ 0.42
CLNS1A-201ENST00000263309 PTPRUQ92729 1446 aa17.67■□□□□ 0.42
CLNS1A-201ENST00000263309 SAFB2Q14151 953 aaKnown RBP eCLIP17.67■□□□□ 0.42
CLNS1A-201ENST00000263309 NBPF1Q3BBV0 1214 aa17.67■□□□□ 0.42
CLNS1A-201ENST00000263309 NRXN3Q9Y4C0 1643 aa17.67■□□□□ 0.42
CLNS1A-201ENST00000263309 ZEB1P37275 1124 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms