RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 UHRF1BP1Q6BDS2 1440 aa19.09■□□□□ 0.65
SFSWAP-201ENST00000261674 ARAP3Q8WWN8 1544 aa19.09■□□□□ 0.65
SFSWAP-201ENST00000261674 ERBINQ96RT1 1412 aa19.09■□□□□ 0.65
SFSWAP-201ENST00000261674 MAP3K4Q9Y6R4 1608 aa19.09■□□□□ 0.65
SFSWAP-201ENST00000261674 PER1O15534 1290 aaPredicted RBP19.09■□□□□ 0.65
SFSWAP-201ENST00000261674 TCERG1O14776 1098 aaKnown RBP19.08■□□□□ 0.65
SFSWAP-201ENST00000261674 TMF1P82094 1093 aa19.08■□□□□ 0.65
SFSWAP-201ENST00000261674 ADAMTS8Q9UP79 889 aa19.07■□□□□ 0.64
SFSWAP-201ENST00000261674 PDE3BQ13370 1112 aa19.06■□□□□ 0.64
SFSWAP-201ENST00000261674 PLA2R1Q13018 1463 aa19.06■□□□□ 0.64
SFSWAP-201ENST00000261674 UGGT1Q9NYU2 1555 aa19.06■□□□□ 0.64
SFSWAP-201ENST00000261674 WDR43Q15061 677 aaKnown RBP eCLIP19.06■□□□□ 0.647e-6■■■■■ 27.3
SFSWAP-201ENST00000261674 C20orf194Q5TEA3 1177 aa19.06■□□□□ 0.64
SFSWAP-201ENST00000261674 DISP3Q9P2K9 1392 aa19.06■□□□□ 0.64
SFSWAP-201ENST00000261674 POLR1AO95602 1720 aaPredicted RBP19.05■□□□□ 0.64
SFSWAP-201ENST00000261674 KNSTRNQ9Y448 316 aa19.05■□□□□ 0.64
SFSWAP-201ENST00000261674 NEFMP07197 916 aa19.04■□□□□ 0.64
SFSWAP-201ENST00000261674 KIF13AQ9H1H9 1805 aa19.04■□□□□ 0.64
SFSWAP-201ENST00000261674 MLH3Q9UHC1 1453 aa19.03■□□□□ 0.64
SFSWAP-201ENST00000261674 TESK2Q96S53 571 aa19.03■□□□□ 0.64
SFSWAP-201ENST00000261674 ABCA6Q8N139 1617 aa19.03■□□□□ 0.64
SFSWAP-201ENST00000261674 MAST1Q9Y2H9 1570 aa19.03■□□□□ 0.64
SFSWAP-201ENST00000261674 SLC4A3P48751 1232 aa19.02■□□□□ 0.64
SFSWAP-201ENST00000261674 INO80Q9ULG1 1556 aaPredicted RBP19.02■□□□□ 0.64
SFSWAP-201ENST00000261674 HECW2Q9P2P5 1572 aa19.02■□□□□ 0.64
SFSWAP-201ENST00000261674 BACH2Q9BYV9 841 aa19.02■□□□□ 0.63
SFSWAP-201ENST00000261674 PLXNC1O60486 1568 aa19.01■□□□□ 0.63
SFSWAP-201ENST00000261674 IDI1Q13907 227 aa19.01■□□□□ 0.63
SFSWAP-201ENST00000261674 PARD3Q8TEW0 1356 aa19.01■□□□□ 0.63
SFSWAP-201ENST00000261674 CCDC146Q8IYE0 955 aa19.01■□□□□ 0.63
SFSWAP-201ENST00000261674 GLI2P10070 1586 aa19.01■□□□□ 0.63
SFSWAP-201ENST00000261674 PRAG1Q86YV5 1406 aa19■□□□□ 0.63
SFSWAP-201ENST00000261674 PPRC1Q5VV67 1664 aaKnown RBP18.99■□□□□ 0.63
SFSWAP-201ENST00000261674 FRMPD1Q5SYB0 1578 aa18.99■□□□□ 0.63
SFSWAP-201ENST00000261674 SAFB2Q14151 953 aaKnown RBP eCLIP18.98■□□□□ 0.639e-7■■■□□ 17.3
SFSWAP-201ENST00000261674 DAXXQ9UER7 740 aaPredicted RBP18.98■□□□□ 0.63
SFSWAP-201ENST00000261674 RGS3P49796 1198 aa18.98■□□□□ 0.63
SFSWAP-201ENST00000261674 TMEM132EQ6IEE7 984 aa18.98■□□□□ 0.63
SFSWAP-201ENST00000261674 CFAP70Q5T0N1 1121 aa18.97■□□□□ 0.63
SFSWAP-201ENST00000261674 RTN4Q9NQC3 1192 aaKnown RBP18.97■□□□□ 0.63
SFSWAP-201ENST00000261674 DIP2CQ9Y2E4 1556 aa18.96■□□□□ 0.63
SFSWAP-201ENST00000261674 ATP10AO60312 1499 aa18.96■□□□□ 0.63
SFSWAP-201ENST00000261674 CFAP74Q9C0B2 1584 aa18.96■□□□□ 0.63
SFSWAP-201ENST00000261674 ADGRF5Q8IZF2 1346 aa18.95■□□□□ 0.62
SFSWAP-201ENST00000261674 NPATQ14207 1427 aa18.95■□□□□ 0.62
SFSWAP-201ENST00000261674 STK26Q9P289 416 aa18.95■□□□□ 0.62
SFSWAP-201ENST00000261674 RICTORQ6R327 1708 aa18.94■□□□□ 0.62
SFSWAP-201ENST00000261674 PPP2R1AP30153 589 aa18.93■□□□□ 0.62
SFSWAP-201ENST00000261674 MS4A1P11836 297 aa18.91■□□□□ 0.62
SFSWAP-201ENST00000261674 PRDM15P57071 1507 aaPredicted RBP18.91■□□□□ 0.62
SFSWAP-201ENST00000261674 GOLGA2Q08379 1002 aa18.9■□□□□ 0.62
SFSWAP-201ENST00000261674 NEUROD2Q15784 382 aa18.89■□□□□ 0.62
SFSWAP-201ENST00000261674 TNNT2P45379 298 aaPredicted RBP18.89■□□□□ 0.61
SFSWAP-201ENST00000261674 UNC13BO14795 1591 aa18.89■□□□□ 0.61
SFSWAP-201ENST00000261674 APAF1O14727 1248 aa18.89■□□□□ 0.61
SFSWAP-201ENST00000261674 TRAK1Q9UPV9 953 aa18.89■□□□□ 0.61
SFSWAP-201ENST00000261674 CEP152O94986 1710 aa18.88■□□□□ 0.61
SFSWAP-201ENST00000261674 E9PCH4 1651 aa18.87■□□□□ 0.61
SFSWAP-201ENST00000261674 KDM5DQ9BY66 1539 aa18.87■□□□□ 0.61
SFSWAP-201ENST00000261674 DUSP27Q5VZP5 1158 aa18.86■□□□□ 0.61
SFSWAP-201ENST00000261674 IQGAP3Q86VI3 1631 aa18.86■□□□□ 0.61
SFSWAP-201ENST00000261674 MROH1Q8NDA8 1641 aa18.86■□□□□ 0.61
SFSWAP-201ENST00000261674 IL27Q8NEV9 243 aa18.85■□□□□ 0.61
SFSWAP-201ENST00000261674 PLEKHH1Q9ULM0 1364 aa18.85■□□□□ 0.61
SFSWAP-201ENST00000261674 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.85■□□□□ 0.61
SFSWAP-201ENST00000261674 ZMYM3Q14202 1370 aa18.84■□□□□ 0.61
SFSWAP-201ENST00000261674 CANXP27824 592 aaKnown RBP18.84■□□□□ 0.61
SFSWAP-201ENST00000261674 SIGLEC1Q9BZZ2 1709 aa18.84■□□□□ 0.61
SFSWAP-201ENST00000261674 BCAR3O75815 825 aa18.83■□□□□ 0.61
SFSWAP-201ENST00000261674 PPM1GO15355 546 aaPredicted RBP18.83■□□□□ 0.61
SFSWAP-201ENST00000261674 ABCC3O15438 1527 aa18.83■□□□□ 0.6
SFSWAP-201ENST00000261674 AMER1Q5JTC6 1135 aaPredicted RBP18.82■□□□□ 0.6
SFSWAP-201ENST00000261674 SPINK5Q9NQ38 1064 aaPredicted RBP18.82■□□□□ 0.6
SFSWAP-201ENST00000261674 GPRASP1Q5JY77 1395 aa18.82■□□□□ 0.6
SFSWAP-201ENST00000261674 MAGI2Q86UL8 1455 aa18.82■□□□□ 0.6
SFSWAP-201ENST00000261674 CDCA8Q53HL2 280 aa18.82■□□□□ 0.6
SFSWAP-201ENST00000261674 DDRGK1Q96HY6 314 aa18.82■□□□□ 0.6
SFSWAP-201ENST00000261674 NOS1P29475 1434 aa18.81■□□□□ 0.6
SFSWAP-201ENST00000261674 CENPQQ7L2Z9 268 aaPredicted RBP18.8■□□□□ 0.6
SFSWAP-201ENST00000261674 FRAT1Q92837 279 aaPredicted RBP18.79■□□□□ 0.6
SFSWAP-201ENST00000261674 TRPM1Q7Z4N2 1603 aa18.78■□□□□ 0.6
SFSWAP-201ENST00000261674 CLTCL1P53675 1640 aa18.78■□□□□ 0.6
SFSWAP-201ENST00000261674 RRP7AQ9Y3A4 280 aaKnown RBP18.78■□□□□ 0.6
SFSWAP-201ENST00000261674 BLMP54132 1417 aaPredicted RBP18.77■□□□□ 0.6
SFSWAP-201ENST00000261674 EFCAB6Q5THR3 1501 aa18.76■□□□□ 0.59
SFSWAP-201ENST00000261674 SLFN5Q08AF3 891 aa18.76■□□□□ 0.59
SFSWAP-201ENST00000261674 FAM161AQ3B820 660 aa18.76■□□□□ 0.59
SFSWAP-201ENST00000261674 PTPRTO14522 1441 aa18.75■□□□□ 0.59
SFSWAP-201ENST00000261674 SLC26A8Q96RN1 970 aa18.75■□□□□ 0.59
SFSWAP-201ENST00000261674 DMRT2Q9Y5R5 561 aa18.75■□□□□ 0.59
SFSWAP-201ENST00000261674 RBM33Q96EV2 1170 aaKnown RBP18.75■□□□□ 0.59
SFSWAP-201ENST00000261674 NFKBIBQ15653 356 aa18.74■□□□□ 0.59
SFSWAP-201ENST00000261674 TET3O43151 1660 aa18.74■□□□□ 0.59
SFSWAP-201ENST00000261674 SLC52A1Q9NWF4 448 aa18.74■□□□□ 0.59
SFSWAP-201ENST00000261674 COG6Q9Y2V7 657 aa18.73■□□□□ 0.59
SFSWAP-201ENST00000261674 NUTM2FA1L443 756 aa18.73■□□□□ 0.59
SFSWAP-201ENST00000261674 DEPDC5O75140 1603 aa18.73■□□□□ 0.59
SFSWAP-201ENST00000261674 PANK1Q8TE04 598 aa18.72■□□□□ 0.59
SFSWAP-201ENST00000261674 KDM2BQ8NHM5 1336 aa18.72■□□□□ 0.59
SFSWAP-201ENST00000261674 BCL2L13Q9BXK5 485 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms