RNA–Protein interactions for RNA: ENST00000261023.7

ITGAV-201, Transcript of integrin subunit alpha V, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGAV, Length 7,030 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-201ENST00000261023 NUTM2BA6NNL0 878 aaPredicted RBP18.21■□□□□ 0.51
ITGAV-201ENST00000261023 NUTM2EB1AL46 878 aaPredicted RBP18.21■□□□□ 0.51
ITGAV-201ENST00000261023 NUTM2AQ8IVF1 878 aaPredicted RBP18.21■□□□□ 0.51
ITGAV-201ENST00000261023 STK11IPQ8N1F8 1099 aa18.2■□□□□ 0.5
ITGAV-201ENST00000261023 HNRNPMP52272 730 aaKnown RBP eCLIP18.2■□□□□ 0.5
ITGAV-201ENST00000261023 TTLL5Q6EMB2 1281 aa18.2■□□□□ 0.5
ITGAV-201ENST00000261023 COG3Q96JB2 828 aa18.2■□□□□ 0.5
ITGAV-201ENST00000261023 IFIT2P09913 472 aaKnown RBP18.2■□□□□ 0.5
ITGAV-201ENST00000261023 ZNF428Q96B54 188 aa18.2■□□□□ 0.5
ITGAV-201ENST00000261023 CEP162Q5TB80 1403 aa18.19■□□□□ 0.5
ITGAV-201ENST00000261023 CPLX2Q6PUV4 134 aaKnown RBP18.19■□□□□ 0.5
ITGAV-201ENST00000261023 CENPJQ9HC77 1338 aaPredicted RBP18.18■□□□□ 0.5
ITGAV-201ENST00000261023 NEUROD6Q96NK8 337 aa18.18■□□□□ 0.5
ITGAV-201ENST00000261023 LRRFIP1Q32MZ4 808 aaKnown RBP18.18■□□□□ 0.5
ITGAV-201ENST00000261023 HOMER1Q86YM7 354 aa18.18■□□□□ 0.5
ITGAV-201ENST00000261023 CHMP4BP1P59074 171 aa18.17■□□□□ 0.5
ITGAV-201ENST00000261023 PAXIP1Q6ZW49 1069 aaPredicted RBP18.17■□□□□ 0.5
ITGAV-201ENST00000261023 WASHC4Q2M389 1173 aa18.16■□□□□ 0.5
ITGAV-201ENST00000261023 RUFY1Q96T51 708 aa18.16■□□□□ 0.5
ITGAV-201ENST00000261023 KIF27Q86VH2 1401 aa18.16■□□□□ 0.5
ITGAV-201ENST00000261023 BICD2Q8TD16 824 aa18.15■□□□□ 0.5
ITGAV-201ENST00000261023 MYCNP04198 464 aaPredicted RBP18.15■□□□□ 0.5
ITGAV-201ENST00000261023 GPS2Q13227 327 aa18.15■□□□□ 0.5
ITGAV-201ENST00000261023 ATF3P18847 181 aa18.15■□□□□ 0.5
ITGAV-201ENST00000261023 RBM5P52756 815 aaKnown RBP eCLIP18.15■□□□□ 0.5
ITGAV-201ENST00000261023 AK7Q96M32 723 aa18.14■□□□□ 0.49
ITGAV-201ENST00000261023 ZNF771Q7L3S4 317 aaPredicted RBP18.14■□□□□ 0.49
ITGAV-201ENST00000261023 MINK1Q8N4C8 1332 aaPredicted RBP18.14■□□□□ 0.49
ITGAV-201ENST00000261023 DHX37Q8IY37 1157 aaKnown RBP18.14■□□□□ 0.49
ITGAV-201ENST00000261023 NUP155O75694 1391 aa18.14■□□□□ 0.49
ITGAV-201ENST00000261023 BAZ1BQ9UIG0 1483 aaKnown RBP18.13■□□□□ 0.49
ITGAV-201ENST00000261023 SPDYE4A6NLX3 237 aa18.13■□□□□ 0.49
ITGAV-201ENST00000261023 OFD1O75665 1012 aa18.12■□□□□ 0.49
ITGAV-201ENST00000261023 PIP4K2BP78356 416 aa18.12■□□□□ 0.49
ITGAV-201ENST00000261023 HOOK1Q9UJC3 728 aaKnown RBP18.12■□□□□ 0.49
ITGAV-201ENST00000261023 ANKRD62A6NC57 917 aa18.12■□□□□ 0.49
ITGAV-201ENST00000261023 CYB5RLQ6IPT4 315 aa18.12■□□□□ 0.49
ITGAV-201ENST00000261023 G3BP1Q13283 466 aaKnown RBP eCLIP18.11■□□□□ 0.49
ITGAV-201ENST00000261023 PDILTQ8N807 584 aa18.11■□□□□ 0.49
ITGAV-201ENST00000261023 RIC3Q7Z5B4 369 aa18.11■□□□□ 0.49
ITGAV-201ENST00000261023 RBM42Q9BTD8 480 aaKnown RBP18.1■□□□□ 0.49
ITGAV-201ENST00000261023 STRN4Q9NRL3 753 aa18.1■□□□□ 0.49
ITGAV-201ENST00000261023 EFCAB2Q5VUJ9 269 aa18.1■□□□□ 0.49
ITGAV-201ENST00000261023 DCAF1Q9Y4B6 1507 aa18.1■□□□□ 0.49
ITGAV-201ENST00000261023 DDX49Q9Y6V7 483 aaKnown RBP18.09■□□□□ 0.49
ITGAV-201ENST00000261023 MATR3P43243 847 aaKnown RBP eCLIP18.09■□□□□ 0.492e-7■□□□□ 8.9
ITGAV-201ENST00000261023 PLCD4Q9BRC7 762 aa18.09■□□□□ 0.49
ITGAV-201ENST00000261023 VPS37CA5D8V6 355 aaPredicted RBP18.09■□□□□ 0.49
ITGAV-201ENST00000261023 CAGE1Q8TC20 777 aa18.08■□□□□ 0.49
ITGAV-201ENST00000261023 CHMP4CQ96CF2 233 aa18.08■□□□□ 0.48
ITGAV-201ENST00000261023 DDX58O95786 925 aaKnown RBP18.08■□□□□ 0.48
ITGAV-201ENST00000261023 MAP7D2Q96T17 732 aa18.07■□□□□ 0.48
ITGAV-201ENST00000261023 SAFBQ15424 915 aaKnown RBP eCLIP18.07■□□□□ 0.48
ITGAV-201ENST00000261023 RUFY2Q8WXA3 655 aa18.07■□□□□ 0.48
ITGAV-201ENST00000261023 NEFHP12036 1026 aa18.07■□□□□ 0.48
ITGAV-201ENST00000261023 NLRP2Q9NX02 1062 aa18.07■□□□□ 0.48
ITGAV-201ENST00000261023 MPHOSPH10O00566 681 aaKnown RBP18.06■□□□□ 0.48
ITGAV-201ENST00000261023 KRT18P05783 430 aaKnown RBP18.06■□□□□ 0.48
ITGAV-201ENST00000261023 ATP2B1P20020 1258 aa18.06■□□□□ 0.48
ITGAV-201ENST00000261023 CDK5RAP3Q96JB5 506 aa18.06■□□□□ 0.48
ITGAV-201ENST00000261023 ZKSCAN1P17029 563 aaPredicted RBP18.06■□□□□ 0.48
ITGAV-201ENST00000261023 PLCD3Q8N3E9 789 aa18.06■□□□□ 0.48
ITGAV-201ENST00000261023 BRMS1Q9HCU9 246 aa18.06■□□□□ 0.48
ITGAV-201ENST00000261023 SYCP1Q15431 976 aa18.05■□□□□ 0.48
ITGAV-201ENST00000261023 RALBP1Q15311 655 aa18.04■□□□□ 0.48
ITGAV-201ENST00000261023 ZHX3Q9H4I2 956 aa18.04■□□□□ 0.48
ITGAV-201ENST00000261023 FKBP5Q13451 457 aaPredicted RBP18.04■□□□□ 0.48
ITGAV-201ENST00000261023 NEBLO76041 1014 aa18.03■□□□□ 0.48
ITGAV-201ENST00000261023 RAPGEF4Q8WZA2 1011 aa18.03■□□□□ 0.48
ITGAV-201ENST00000261023 ATP6V1DQ9Y5K8 247 aa18.03■□□□□ 0.48
ITGAV-201ENST00000261023 RALYLQ86SE5 291 aaKnown RBP18.03■□□□□ 0.48
ITGAV-201ENST00000261023 BRPF1P55201 1214 aaPredicted RBP18.03■□□□□ 0.48
ITGAV-201ENST00000261023 RBM19Q9Y4C8 960 aaKnown RBP18.03■□□□□ 0.48
ITGAV-201ENST00000261023 CARMIL2Q6F5E8 1435 aa18.02■□□□□ 0.47
ITGAV-201ENST00000261023 CCDC173Q0VFZ6 552 aa18.01■□□□□ 0.47
ITGAV-201ENST00000261023 SASS6Q6UVJ0 657 aa18.01■□□□□ 0.47
ITGAV-201ENST00000261023 PDCL3Q9H2J4 239 aa18.01■□□□□ 0.47
ITGAV-201ENST00000261023 RDXP35241 583 aaKnown RBP18.01■□□□□ 0.47
ITGAV-201ENST00000261023 CDR1P51861 262 aa18■□□□□ 0.47
ITGAV-201ENST00000261023 KIF6Q6ZMV9 814 aa18■□□□□ 0.47
ITGAV-201ENST00000261023 WRNQ14191 1432 aaPredicted RBP eCLIP18■□□□□ 0.47
ITGAV-201ENST00000261023 EEA1Q15075 1411 aa18■□□□□ 0.47
ITGAV-201ENST00000261023 DNAJC2Q99543 621 aaKnown RBP18■□□□□ 0.47
ITGAV-201ENST00000261023 MPHOSPH9Q99550 1183 aa18■□□□□ 0.47
ITGAV-201ENST00000261023 ARHGAP35Q9NRY4 1499 aa17.99■□□□□ 0.47
ITGAV-201ENST00000261023 TSPYL4Q9UJ04 414 aa17.99■□□□□ 0.47
ITGAV-201ENST00000261023 RNF20Q5VTR2 975 aa17.98■□□□□ 0.47
ITGAV-201ENST00000261023 DDX11L8A8MPP1 907 aa17.98■□□□□ 0.47
ITGAV-201ENST00000261023 OLFM4Q6UX06 510 aa17.98■□□□□ 0.47
ITGAV-201ENST00000261023 TMEM87AQ8NBN3 555 aa17.98■□□□□ 0.47
ITGAV-201ENST00000261023 HMOX1P09601 288 aa17.98■□□□□ 0.47
ITGAV-201ENST00000261023 WASHC2AQ641Q2 1341 aa17.97■□□□□ 0.47
ITGAV-201ENST00000261023 FAM161AQ3B820 660 aa17.97■□□□□ 0.47
ITGAV-201ENST00000261023 ZSCAN29Q8IWY8 852 aaPredicted RBP17.97■□□□□ 0.47
ITGAV-201ENST00000261023 TEX35Q5T0J7 233 aa17.96■□□□□ 0.47
ITGAV-201ENST00000261023 SMC3Q9UQE7 1217 aa17.96■□□□□ 0.47
ITGAV-201ENST00000261023 CUX2O14529 1486 aa17.96■□□□□ 0.47
ITGAV-201ENST00000261023 XBP1P17861 261 aa17.95■□□□□ 0.46
ITGAV-201ENST00000261023 SEPT11Q9NVA2 429 aaKnown RBP17.95■□□□□ 0.46
ITGAV-201ENST00000261023 CA8P35219 290 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms