RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ABCC10Q5T3U5 1492 aa16.99■□□□□ 0.31
PRPF38A-201ENST00000257181 ZRSR1Q15695 479 aaKnown RBP16.98■□□□□ 0.31
PRPF38A-201ENST00000257181 NOL10Q9BSC4 688 aaKnown RBP16.98■□□□□ 0.31
PRPF38A-201ENST00000257181 SMC4Q9NTJ3 1288 aa16.98■□□□□ 0.31
PRPF38A-201ENST00000257181 ZNF330Q9Y3S2 320 aaPredicted RBP16.98■□□□□ 0.31
PRPF38A-201ENST00000257181 ARAP1Q96P48 1450 aa16.98■□□□□ 0.31
PRPF38A-201ENST00000257181 GOLGA6L22H0YM25 854 aa16.98■□□□□ 0.31
PRPF38A-201ENST00000257181 PLEKHO1Q53GL0 409 aaPredicted RBP16.98■□□□□ 0.31
PRPF38A-201ENST00000257181 KCNJ4P48050 445 aa16.97■□□□□ 0.31
PRPF38A-201ENST00000257181 CAMSAP2Q08AD1 1489 aa16.97■□□□□ 0.31
PRPF38A-201ENST00000257181 AMOTL1Q8IY63 956 aa16.97■□□□□ 0.31
PRPF38A-201ENST00000257181 ARHGEF11O15085 1522 aa16.96■□□□□ 0.31
PRPF38A-201ENST00000257181 DIAPH1O60610 1272 aaKnown RBP16.96■□□□□ 0.31
PRPF38A-201ENST00000257181 FGD1P98174 961 aa16.96■□□□□ 0.31
PRPF38A-201ENST00000257181 CADPS2Q86UW7 1296 aa16.96■□□□□ 0.31
PRPF38A-201ENST00000257181 LTV1Q96GA3 475 aaPredicted RBP16.96■□□□□ 0.3
PRPF38A-201ENST00000257181 TATP17735 454 aaPredicted RBP16.95■□□□□ 0.3
PRPF38A-201ENST00000257181 PNISRQ8TF01 805 aaKnown RBP16.95■□□□□ 0.3
PRPF38A-201ENST00000257181 MSH6P52701 1360 aa16.95■□□□□ 0.3
PRPF38A-201ENST00000257181 RTEL1-TNFRSF6BF6WH68 1400 aa16.95■□□□□ 0.3
PRPF38A-201ENST00000257181 GAS2L2Q8NHY3 880 aa16.95■□□□□ 0.3
PRPF38A-201ENST00000257181 USP47Q96K76 1375 aa16.94■□□□□ 0.3
PRPF38A-201ENST00000257181 SPG7Q9UQ90 795 aa16.94■□□□□ 0.3
PRPF38A-201ENST00000257181 ERBINQ96RT1 1412 aa16.94■□□□□ 0.3
PRPF38A-201ENST00000257181 MYBBP1AQ9BQG0 1328 aaKnown RBP16.93■□□□□ 0.3
PRPF38A-201ENST00000257181 NLRP6P59044 892 aa16.93■□□□□ 0.3
PRPF38A-201ENST00000257181 ZNF644Q9H582 1327 aaPredicted RBP16.93■□□□□ 0.3
PRPF38A-201ENST00000257181 NLRP2Q9NX02 1062 aa16.92■□□□□ 0.3
PRPF38A-201ENST00000257181 NEO1Q92859 1461 aa16.92■□□□□ 0.3
PRPF38A-201ENST00000257181 NUTM2FA1L443 756 aa16.91■□□□□ 0.3
PRPF38A-201ENST00000257181 ABTB2Q8N961 1025 aa16.91■□□□□ 0.3
PRPF38A-201ENST00000257181 HIRIP3Q9BW71 556 aaPredicted RBP16.91■□□□□ 0.3
PRPF38A-201ENST00000257181 KIAA0556O60303 1618 aa16.91■□□□□ 0.3
PRPF38A-201ENST00000257181 FRAT1Q92837 279 aaPredicted RBP16.9■□□□□ 0.3
PRPF38A-201ENST00000257181 CTTNBP2Q8WZ74 1663 aa16.9■□□□□ 0.3
PRPF38A-201ENST00000257181 DUOX2Q9NRD8 1548 aa16.9■□□□□ 0.3
PRPF38A-201ENST00000257181 CDK13Q14004 1512 aaKnown RBP16.9■□□□□ 0.3
PRPF38A-201ENST00000257181 KIAA1211Q6ZU35 1233 aa16.9■□□□□ 0.3
PRPF38A-201ENST00000257181 UHRF1BP1Q6BDS2 1440 aa16.88■□□□□ 0.29
PRPF38A-201ENST00000257181 FKBP8Q14318 412 aa16.87■□□□□ 0.29
PRPF38A-201ENST00000257181 NINLQ9Y2I6 1382 aa16.87■□□□□ 0.29
PRPF38A-201ENST00000257181 FRAT2O75474 233 aaPredicted RBP16.87■□□□□ 0.29
PRPF38A-201ENST00000257181 PBRM1Q86U86 1689 aa16.87■□□□□ 0.29
PRPF38A-201ENST00000257181 UHRF1BP1LA0JNW5 1464 aa16.87■□□□□ 0.29
PRPF38A-201ENST00000257181 RWDD1Q9H446 243 aaPredicted RBP16.87■□□□□ 0.29
PRPF38A-201ENST00000257181 A2MP01023 1474 aa16.87■□□□□ 0.29
PRPF38A-201ENST00000257181 PMFBP1Q8TBY8 1022 aa16.86■□□□□ 0.29
PRPF38A-201ENST00000257181 TRIM34Q9BYJ4 488 aa16.86■□□□□ 0.29
PRPF38A-201ENST00000257181 PCF11O94913 1555 aaKnown RBP16.86■□□□□ 0.29
PRPF38A-201ENST00000257181 PIP4K2BP78356 416 aa16.86■□□□□ 0.29
PRPF38A-201ENST00000257181 ST20-MTHFSA0A0A6YYL1 179 aa16.85■□□□□ 0.29
PRPF38A-201ENST00000257181 C11orf95C9JLR9 678 aaPredicted RBP16.85■□□□□ 0.29
PRPF38A-201ENST00000257181 PRDM11Q9NQV5 511 aa16.85■□□□□ 0.29
PRPF38A-201ENST00000257181 ERICH6BQ5W0A0 696 aa16.84■□□□□ 0.29
PRPF38A-201ENST00000257181 CHMP3Q9Y3E7 222 aa16.84■□□□□ 0.29
PRPF38A-201ENST00000257181 PANK3Q9H999 370 aa16.83■□□□□ 0.29
PRPF38A-201ENST00000257181 SYTL4Q96C24 671 aaPredicted RBP16.83■□□□□ 0.29
PRPF38A-201ENST00000257181 CCDC34Q96HJ3 373 aa16.83■□□□□ 0.28
PRPF38A-201ENST00000257181 GNAI1P63096 354 aa16.83■□□□□ 0.28
PRPF38A-201ENST00000257181 RBM33Q96EV2 1170 aaKnown RBP16.83■□□□□ 0.28
PRPF38A-201ENST00000257181 ATP10AO60312 1499 aa16.82■□□□□ 0.28
PRPF38A-201ENST00000257181 KIF6Q6ZMV9 814 aa16.82■□□□□ 0.28
PRPF38A-201ENST00000257181 PRAM1Q96QH2 718 aa16.82■□□□□ 0.28
PRPF38A-201ENST00000257181 HSP90AB4PQ58FF6 505 aa16.82■□□□□ 0.28
PRPF38A-201ENST00000257181 KDM5BQ9UGL1 1544 aa16.81■□□□□ 0.28
PRPF38A-201ENST00000257181 PTPN23Q9H3S7 1636 aa16.81■□□□□ 0.28
PRPF38A-201ENST00000257181 HTATSF1O43719 755 aaKnown RBP16.81■□□□□ 0.28
PRPF38A-201ENST00000257181 TOM1L2Q6ZVM7 507 aa16.81■□□□□ 0.28
PRPF38A-201ENST00000257181 CCDC7Q96M83 1385 aa16.81■□□□□ 0.28
PRPF38A-201ENST00000257181 ATP10BO94823 1461 aa16.8■□□□□ 0.28
PRPF38A-201ENST00000257181 ISY1Q9ULR0 285 aaKnown RBP16.8■□□□□ 0.28
PRPF38A-201ENST00000257181 API5Q9BZZ5 524 aaKnown RBP16.8■□□□□ 0.28
PRPF38A-201ENST00000257181 NCOA1Q15788 1441 aa16.8■□□□□ 0.28
PRPF38A-201ENST00000257181 NUTM2BA6NNL0 878 aaPredicted RBP16.79■□□□□ 0.28
PRPF38A-201ENST00000257181 NUTM2EB1AL46 878 aaPredicted RBP16.79■□□□□ 0.28
PRPF38A-201ENST00000257181 AAMPQ13685 434 aa16.79■□□□□ 0.28
PRPF38A-201ENST00000257181 NUTM2AQ8IVF1 878 aaPredicted RBP16.79■□□□□ 0.28
PRPF38A-201ENST00000257181 E9PSI1 815 aa16.78■□□□□ 0.28
PRPF38A-201ENST00000257181 CDK19Q9BWU1 502 aa16.78■□□□□ 0.28
PRPF38A-201ENST00000257181 CTDP1Q9Y5B0 961 aaPredicted RBP16.78■□□□□ 0.28
PRPF38A-201ENST00000257181 CEP170Q5SW79 1584 aa16.77■□□□□ 0.28
PRPF38A-201ENST00000257181 KIF3AQ9Y496 699 aa16.77■□□□□ 0.28
PRPF38A-201ENST00000257181 CCDC61Q9Y6R9 512 aa16.76■□□□□ 0.27
PRPF38A-201ENST00000257181 UBAP1LF5GYI3 381 aa16.76■□□□□ 0.27
PRPF38A-201ENST00000257181 NGLY1Q96IV0 654 aa16.75■□□□□ 0.27
PRPF38A-201ENST00000257181 MAGI2Q86UL8 1455 aa16.75■□□□□ 0.27
PRPF38A-201ENST00000257181 SHANK2Q9UPX8 1470 aa16.75■□□□□ 0.27
PRPF38A-201ENST00000257181 ABCA5Q8WWZ7 1642 aa16.75■□□□□ 0.27
PRPF38A-201ENST00000257181 NPHP3Q7Z494 1330 aa16.75■□□□□ 0.27
PRPF38A-201ENST00000257181 GOLGA6L6A8MZA4 724 aa16.75■□□□□ 0.27
PRPF38A-201ENST00000257181 RUNDC1Q96C34 613 aa16.74■□□□□ 0.27
PRPF38A-201ENST00000257181 ITPRIPQ8IWB1 547 aa16.73■□□□□ 0.27
PRPF38A-201ENST00000257181 PHF8Q9UPP1 1060 aa16.73■□□□□ 0.27
PRPF38A-201ENST00000257181 VPS37DQ86XT2 251 aa16.72■□□□□ 0.27
PRPF38A-201ENST00000257181 STRN4Q9NRL3 753 aa16.72■□□□□ 0.27
PRPF38A-201ENST00000257181 SLC26A8Q96RN1 970 aa16.72■□□□□ 0.27
PRPF38A-201ENST00000257181 ZNF652Q9Y2D9 606 aa16.71■□□□□ 0.27
PRPF38A-201ENST00000257181 AMOTQ4VCS5 1084 aa16.71■□□□□ 0.27
PRPF38A-201ENST00000257181 AMOTL2Q9Y2J4 779 aa16.71■□□□□ 0.27
PRPF38A-201ENST00000257181 ABCC5O15440 1437 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms