RNA–Protein interactions for RNA: ENST00000256996.8

DDB2-201, Transcript of damage specific DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB2, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-201ENST00000256996 RPGRIP1LQ68CZ1 1315 aa17.25■□□□□ 0.35
DDB2-201ENST00000256996 LMTK3Q96Q04 1460 aa17.23■□□□□ 0.35
DDB2-201ENST00000256996 ROCK2O75116 1388 aaKnown RBP17.23■□□□□ 0.35
DDB2-201ENST00000256996 CARD11Q9BXL7 1154 aa17.23■□□□□ 0.35
DDB2-201ENST00000256996 MYOM2P54296 1465 aa17.23■□□□□ 0.35
DDB2-201ENST00000256996 MROH2AA6NES4 1674 aa17.22■□□□□ 0.35
DDB2-201ENST00000256996 NBPF1Q3BBV0 1214 aa17.22■□□□□ 0.35
DDB2-201ENST00000256996 GPRASP1Q5JY77 1395 aa17.21■□□□□ 0.35
DDB2-201ENST00000256996 ADGRF5Q8IZF2 1346 aa17.21■□□□□ 0.35
DDB2-201ENST00000256996 USP47Q96K76 1375 aa17.2■□□□□ 0.34
DDB2-201ENST00000256996 TRPM1Q7Z4N2 1603 aa17.2■□□□□ 0.34
DDB2-201ENST00000256996 MADDQ8WXG6 1647 aa17.2■□□□□ 0.34
DDB2-201ENST00000256996 NRXN1Q9ULB1 1477 aa17.19■□□□□ 0.34
DDB2-201ENST00000256996 CEBPAP49715 358 aaPredicted RBP17.19■□□□□ 0.34
DDB2-201ENST00000256996 TNRQ92752 1358 aa17.19■□□□□ 0.34
DDB2-201ENST00000256996 TMEM131LA2VDJ0 1609 aa17.18■□□□□ 0.34
DDB2-201ENST00000256996 STAG3Q9UJ98 1225 aa17.18■□□□□ 0.34
DDB2-201ENST00000256996 VGFO15240 615 aaPredicted RBP17.17■□□□□ 0.34
DDB2-201ENST00000256996 IFT172Q9UG01 1749 aa17.16■□□□□ 0.34
DDB2-201ENST00000256996 DDX10Q13206 875 aaKnown RBP17.16■□□□□ 0.34
DDB2-201ENST00000256996 NEXMIFQ5QGS0 1516 aa17.15■□□□□ 0.34
DDB2-201ENST00000256996 ZFYVE9O95405 1425 aa17.15■□□□□ 0.34
DDB2-201ENST00000256996 A2ML1A8K2U0 1454 aa17.15■□□□□ 0.34
DDB2-201ENST00000256996 PIK3C2GO75747 1445 aa17.15■□□□□ 0.34
DDB2-201ENST00000256996 FER1L4A9Z1Z3 1794 aa17.14■□□□□ 0.34
DDB2-201ENST00000256996 CFAP70Q5T0N1 1121 aa17.14■□□□□ 0.33
DDB2-201ENST00000256996 PPLO60437 1756 aa17.13■□□□□ 0.33
DDB2-201ENST00000256996 ST20-MTHFSA0A0A6YYL1 179 aa17.12■□□□□ 0.33
DDB2-201ENST00000256996 NUTM2DQ5VT03 806 aaPredicted RBP17.12■□□□□ 0.33
DDB2-201ENST00000256996 LAMC1P11047 1609 aa17.12■□□□□ 0.33
DDB2-201ENST00000256996 C14orf93Q9H972 538 aaKnown RBP17.12■□□□□ 0.33
DDB2-201ENST00000256996 C3P01024 1663 aa17.11■□□□□ 0.33
DDB2-201ENST00000256996 WASHC2AQ641Q2 1341 aa17.11■□□□□ 0.33
DDB2-201ENST00000256996 NLRP1Q9C000 1473 aa17.11■□□□□ 0.33
DDB2-201ENST00000256996 C11orf95C9JLR9 678 aaPredicted RBP17.1■□□□□ 0.33
DDB2-201ENST00000256996 NEFLP07196 543 aa17.1■□□□□ 0.33
DDB2-201ENST00000256996 CCER2I3L3R5 266 aa17.1■□□□□ 0.33
DDB2-201ENST00000256996 KIAA1210Q9ULL0 1709 aa17.09■□□□□ 0.33
DDB2-201ENST00000256996 ADAMTSL3P82987 1691 aa17.09■□□□□ 0.33
DDB2-201ENST00000256996 PLPPR3Q6T4P5 718 aa17.09■□□□□ 0.33
DDB2-201ENST00000256996 RIMS2Q9UQ26 1411 aa17.07■□□□□ 0.32
DDB2-201ENST00000256996 SCAF11Q99590 1463 aaKnown RBP17.07■□□□□ 0.32
DDB2-201ENST00000256996 MYO5BQ9ULV0 1848 aa17.07■□□□□ 0.32
DDB2-201ENST00000256996 CCDC7Q96M83 1385 aa17.06■□□□□ 0.32
DDB2-201ENST00000256996 FKBP8Q14318 412 aa17.06■□□□□ 0.32
DDB2-201ENST00000256996 SOCS7O14512 581 aa17.05■□□□□ 0.32
DDB2-201ENST00000256996 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.05■□□□□ 0.32
DDB2-201ENST00000256996 KIF7Q2M1P5 1343 aa17.05■□□□□ 0.32
DDB2-201ENST00000256996 KDM5AP29375 1690 aaKnown RBP17.05■□□□□ 0.32
DDB2-201ENST00000256996 TMEM2Q9UHN6 1383 aa17.05■□□□□ 0.32
DDB2-201ENST00000256996 HDGFP51858 240 aaKnown RBP17.05■□□□□ 0.32
DDB2-201ENST00000256996 RBM19Q9Y4C8 960 aaKnown RBP17.05■□□□□ 0.32
DDB2-201ENST00000256996 RIMS1Q86UR5 1692 aaKnown RBP17.05■□□□□ 0.32
DDB2-201ENST00000256996 SETBP1Q9Y6X0 1596 aa17.04■□□□□ 0.32
DDB2-201ENST00000256996 TESK2Q96S53 571 aa17.04■□□□□ 0.32
DDB2-201ENST00000256996 PTPRMP28827 1452 aa17.04■□□□□ 0.32
DDB2-201ENST00000256996 ADGRB1O14514 1584 aa17.03■□□□□ 0.32
DDB2-201ENST00000256996 TMEM132EQ6IEE7 984 aa17.03■□□□□ 0.32
DDB2-201ENST00000256996 BCANQ96GW7 911 aa17.03■□□□□ 0.32
DDB2-201ENST00000256996 PRKCSHP14314 528 aaPredicted RBP17.02■□□□□ 0.32
DDB2-201ENST00000256996 FANCIQ9NVI1 1328 aa17.02■□□□□ 0.32
DDB2-201ENST00000256996 EIF3AQ14152 1382 aaKnown RBP17.02■□□□□ 0.31
DDB2-201ENST00000256996 UBR1Q8IWV7 1749 aa17.02■□□□□ 0.31
DDB2-201ENST00000256996 ILDR2Q71H61 639 aa17.01■□□□□ 0.31
DDB2-201ENST00000256996 IQGAP1P46940 1657 aa17.01■□□□□ 0.31
DDB2-201ENST00000256996 THEMISQ8N1K5 641 aaPredicted RBP17.01■□□□□ 0.31
DDB2-201ENST00000256996 DISP3Q9P2K9 1392 aa17.01■□□□□ 0.31
DDB2-201ENST00000256996 ANP32CO43423 234 aa16.99■□□□□ 0.31
DDB2-201ENST00000256996 SENP3Q9H4L4 574 aaPredicted RBP16.99■□□□□ 0.31
DDB2-201ENST00000256996 LTKP29376 864 aa16.98■□□□□ 0.31
DDB2-201ENST00000256996 TRAK1Q9UPV9 953 aa16.98■□□□□ 0.31
DDB2-201ENST00000256996 MYO3AQ8NEV4 1616 aa16.97■□□□□ 0.31
DDB2-201ENST00000256996 ALKQ9UM73 1620 aa16.97■□□□□ 0.31
DDB2-201ENST00000256996 TMF1P82094 1093 aa16.97■□□□□ 0.31
DDB2-201ENST00000256996 ARHGAP23Q9P227 1491 aa16.96■□□□□ 0.31
DDB2-201ENST00000256996 TXNDC2Q86VQ3 553 aa16.96■□□□□ 0.31
DDB2-201ENST00000256996 EID1Q9Y6B2 187 aa16.96■□□□□ 0.31
DDB2-201ENST00000256996 SLIT1O75093 1534 aa16.96■□□□□ 0.31
DDB2-201ENST00000256996 SLC24A1O60721 1099 aa16.95■□□□□ 0.3
DDB2-201ENST00000256996 ASXL1Q8IXJ9 1541 aa16.95■□□□□ 0.3
DDB2-201ENST00000256996 CEP170BQ9Y4F5 1589 aaPredicted RBP16.94■□□□□ 0.3
DDB2-201ENST00000256996 POLR3GLQ9BT43 218 aa16.94■□□□□ 0.3
DDB2-201ENST00000256996 CENPJQ9HC77 1338 aaPredicted RBP16.93■□□□□ 0.3
DDB2-201ENST00000256996 POLR1AO95602 1720 aaPredicted RBP16.93■□□□□ 0.3
DDB2-201ENST00000256996 PLEKHG1Q9ULL1 1385 aa16.93■□□□□ 0.3
DDB2-201ENST00000256996 SBNO2Q9Y2G9 1366 aa16.93■□□□□ 0.3
DDB2-201ENST00000256996 CERKQ8TCT0 537 aa16.93■□□□□ 0.3
DDB2-201ENST00000256996 YTHDC2Q9H6S0 1430 aaKnown RBP16.92■□□□□ 0.3
DDB2-201ENST00000256996 STK26Q9P289 416 aa16.92■□□□□ 0.3
DDB2-201ENST00000256996 NRXN3Q9Y4C0 1643 aa16.91■□□□□ 0.3
DDB2-201ENST00000256996 SETD1BQ9UPS6 1966 aaKnown RBP16.9■□□□□ 0.3
DDB2-201ENST00000256996 METP08581 1390 aa16.9■□□□□ 0.3
DDB2-201ENST00000256996 CDCA8Q53HL2 280 aa16.9■□□□□ 0.3
DDB2-201ENST00000256996 ADAMTS13Q76LX8 1427 aa16.9■□□□□ 0.3
DDB2-201ENST00000256996 LRPPRCP42704 1394 aaKnown RBP16.88■□□□□ 0.29
DDB2-201ENST00000256996 ZNF142P52746 1687 aaPredicted RBP16.87■□□□□ 0.29
DDB2-201ENST00000256996 ABCC11Q96J66 1382 aa16.87■□□□□ 0.29
DDB2-201ENST00000256996 ERICH6BQ5W0A0 696 aa16.87■□□□□ 0.29
DDB2-201ENST00000256996 SETD1AO15047 1707 aaKnown RBP16.87■□□□□ 0.29
DDB2-201ENST00000256996 HSPA2P54652 639 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms