RNA–Protein interactions for RNA: ENST00000256495.3

BHLHE40-201, Transcript of basic helix-loop-helix family member e40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BHLHE40, Length 3,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE40-201ENST00000256495 BCL11AQ9H165 835 aa16.71■□□□□ 0.27
BHLHE40-201ENST00000256495 GGNBP2Q9H3C7 697 aa16.71■□□□□ 0.27
BHLHE40-201ENST00000256495 MAST1Q9Y2H9 1570 aa16.71■□□□□ 0.27
BHLHE40-201ENST00000256495 PPP2R1AP30153 589 aa16.71■□□□□ 0.27
BHLHE40-201ENST00000256495 CCDC136Q96JN2 1154 aa16.71■□□□□ 0.27
BHLHE40-201ENST00000256495 U2SURPO15042 1029 aaKnown RBP16.71■□□□□ 0.26
BHLHE40-201ENST00000256495 TSPOAP1O95153 1857 aa16.7■□□□□ 0.26
BHLHE40-201ENST00000256495 TXNDC2Q86VQ3 553 aa16.69■□□□□ 0.26
BHLHE40-201ENST00000256495 RBM33Q96EV2 1170 aaKnown RBP16.69■□□□□ 0.26
BHLHE40-201ENST00000256495 APAF1O14727 1248 aa16.69■□□□□ 0.26
BHLHE40-201ENST00000256495 CARD14Q9BXL6 1004 aa16.69■□□□□ 0.26
BHLHE40-201ENST00000256495 SLC26A8Q96RN1 970 aa16.68■□□□□ 0.26
BHLHE40-201ENST00000256495 TSHZ2Q9NRE2 1034 aa16.68■□□□□ 0.26
BHLHE40-201ENST00000256495 KDM5DQ9BY66 1539 aa16.68■□□□□ 0.26
BHLHE40-201ENST00000256495 EIF3AQ14152 1382 aaKnown RBP16.68■□□□□ 0.26
BHLHE40-201ENST00000256495 NUDCQ9Y266 331 aa16.68■□□□□ 0.26
BHLHE40-201ENST00000256495 PRDM15P57071 1507 aaPredicted RBP16.67■□□□□ 0.26
BHLHE40-201ENST00000256495 KDM5CP41229 1560 aa16.66■□□□□ 0.26
BHLHE40-201ENST00000256495 NCKAP5LQ9HCH0 1330 aa16.65■□□□□ 0.26
BHLHE40-201ENST00000256495 C14orf93Q9H972 538 aaKnown RBP16.65■□□□□ 0.26
BHLHE40-201ENST00000256495 AMER1Q5JTC6 1135 aaPredicted RBP16.64■□□□□ 0.25
BHLHE40-201ENST00000256495 U2AF1L5P0DN76 240 aaPredicted RBP16.62■□□□□ 0.25
BHLHE40-201ENST00000256495 U2AF1Q01081 240 aaKnown RBP eCLIP16.62■□□□□ 0.25
BHLHE40-201ENST00000256495 RCAN3Q9UKA8 241 aa16.62■□□□□ 0.25
BHLHE40-201ENST00000256495 PLXNC1O60486 1568 aa16.62■□□□□ 0.25
BHLHE40-201ENST00000256495 SLC52A1Q9NWF4 448 aa16.62■□□□□ 0.25
BHLHE40-201ENST00000256495 ABCA9Q8IUA7 1624 aa16.62■□□□□ 0.25
BHLHE40-201ENST00000256495 MTHFSP49914 203 aa16.61■□□□□ 0.25
BHLHE40-201ENST00000256495 CABP1Q9NZU7 370 aa16.61■□□□□ 0.25
BHLHE40-201ENST00000256495 SCAF11Q99590 1463 aaKnown RBP16.61■□□□□ 0.25
BHLHE40-201ENST00000256495 SKAP1Q86WV1 359 aa16.61■□□□□ 0.25
BHLHE40-201ENST00000256495 EVC2Q86UK5 1308 aa16.6■□□□□ 0.25
BHLHE40-201ENST00000256495 BRD4O60885 1362 aaPredicted RBP16.6■□□□□ 0.25
BHLHE40-201ENST00000256495 EXOC6Q8TAG9 804 aa16.6■□□□□ 0.25
BHLHE40-201ENST00000256495 BCL2L13Q9BXK5 485 aa16.6■□□□□ 0.25
BHLHE40-201ENST00000256495 E9PCH4 1651 aa16.59■□□□□ 0.25
BHLHE40-201ENST00000256495 CANXP27824 592 aaKnown RBP16.59■□□□□ 0.25
BHLHE40-201ENST00000256495 IQGAP3Q86VI3 1631 aa16.59■□□□□ 0.25
BHLHE40-201ENST00000256495 PPP4R2Q9NY27 417 aa16.59■□□□□ 0.25
BHLHE40-201ENST00000256495 GPRASP1Q5JY77 1395 aa16.59■□□□□ 0.25
BHLHE40-201ENST00000256495 UNC13BO14795 1591 aa16.59■□□□□ 0.25
BHLHE40-201ENST00000256495 CLTCL1P53675 1640 aa16.58■□□□□ 0.25
BHLHE40-201ENST00000256495 C14orf37Q86TY3 774 aa16.58■□□□□ 0.25
BHLHE40-201ENST00000256495 ZBTB7CA1YPR0 619 aa16.58■□□□□ 0.24
BHLHE40-201ENST00000256495 FRAT1Q92837 279 aaPredicted RBP16.58■□□□□ 0.24
BHLHE40-201ENST00000256495 PTPRTO14522 1441 aa16.57■□□□□ 0.24
BHLHE40-201ENST00000256495 CDK19Q9BWU1 502 aa16.57■□□□□ 0.24
BHLHE40-201ENST00000256495 MAGI2Q86UL8 1455 aa16.57■□□□□ 0.24
BHLHE40-201ENST00000256495 LAS1LQ9Y4W2 734 aaKnown RBP16.57■□□□□ 0.24
BHLHE40-201ENST00000256495 NPM2Q86SE8 214 aaKnown RBP16.56■□□□□ 0.24
BHLHE40-201ENST00000256495 COL17A1Q9UMD9 1497 aaPredicted RBP16.56■□□□□ 0.24
BHLHE40-201ENST00000256495 NSD3Q9BZ95 1437 aa16.55■□□□□ 0.24
BHLHE40-201ENST00000256495 KIDINS220Q9ULH0 1771 aa16.55■□□□□ 0.24
BHLHE40-201ENST00000256495 SLC24A1O60721 1099 aa16.54■□□□□ 0.24
BHLHE40-201ENST00000256495 STAC3Q96MF2 364 aa16.54■□□□□ 0.24
BHLHE40-201ENST00000256495 PARD3Q8TEW0 1356 aa16.53■□□□□ 0.24
BHLHE40-201ENST00000256495 MLH3Q9UHC1 1453 aa16.53■□□□□ 0.24
BHLHE40-201ENST00000256495 TRPM2O94759 1503 aa16.52■□□□□ 0.24
BHLHE40-201ENST00000256495 NUTM2GQ5VZR2 741 aa16.52■□□□□ 0.24
BHLHE40-201ENST00000256495 ZRANB1Q9UGI0 708 aa16.52■□□□□ 0.24
BHLHE40-201ENST00000256495 RBM19Q9Y4C8 960 aaKnown RBP16.52■□□□□ 0.24
BHLHE40-201ENST00000256495 RIMBP3CA6NJZ7 1639 aa16.52■□□□□ 0.23
BHLHE40-201ENST00000256495 RIMBP3BA6NNM3 1639 aa16.52■□□□□ 0.23
BHLHE40-201ENST00000256495 RIMBP3Q9UFD9 1639 aa16.52■□□□□ 0.23
BHLHE40-201ENST00000256495 CGNL1Q0VF96 1302 aa16.52■□□□□ 0.23
BHLHE40-201ENST00000256495 C20orf194Q5TEA3 1177 aa16.51■□□□□ 0.23
BHLHE40-201ENST00000256495 PMFBP1Q8TBY8 1022 aa16.51■□□□□ 0.23
BHLHE40-201ENST00000256495 CLUAP1Q96AJ1 413 aa16.5■□□□□ 0.23
BHLHE40-201ENST00000256495 CFAP53Q96M91 514 aa16.5■□□□□ 0.23
BHLHE40-201ENST00000256495 DMRT2Q9Y5R5 561 aa16.5■□□□□ 0.23
BHLHE40-201ENST00000256495 GOLGA2Q08379 1002 aa16.5■□□□□ 0.23
BHLHE40-201ENST00000256495 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
BHLHE40-201ENST00000256495 INO80Q9ULG1 1556 aaPredicted RBP16.5■□□□□ 0.23
BHLHE40-201ENST00000256495 NEO1Q92859 1461 aa16.5■□□□□ 0.23
BHLHE40-201ENST00000256495 HMOX1P09601 288 aa16.5■□□□□ 0.23
BHLHE40-201ENST00000256495 HDGFL2Q7Z4V5 671 aaPredicted RBP16.5■□□□□ 0.23
BHLHE40-201ENST00000256495 TRPM1Q7Z4N2 1603 aa16.49■□□□□ 0.23
BHLHE40-201ENST00000256495 CEP152O94986 1710 aa16.49■□□□□ 0.23
BHLHE40-201ENST00000256495 ARAP3Q8WWN8 1544 aa16.49■□□□□ 0.23
BHLHE40-201ENST00000256495 RRP1P56182 461 aaKnown RBP16.49■□□□□ 0.23
BHLHE40-201ENST00000256495 LMOD2Q6P5Q4 547 aa16.48■□□□□ 0.23
BHLHE40-201ENST00000256495 TERF2IPQ9NYB0 399 aa16.48■□□□□ 0.23
BHLHE40-201ENST00000256495 RPGRIP1LQ68CZ1 1315 aa16.48■□□□□ 0.23
BHLHE40-201ENST00000256495 HECW2Q9P2P5 1572 aa16.48■□□□□ 0.23
BHLHE40-201ENST00000256495 ZMYM3Q14202 1370 aa16.47■□□□□ 0.23
BHLHE40-201ENST00000256495 PPRC1Q5VV67 1664 aaKnown RBP16.47■□□□□ 0.23
BHLHE40-201ENST00000256495 BCAR3O75815 825 aa16.47■□□□□ 0.23
BHLHE40-201ENST00000256495 CRBNQ96SW2 442 aa16.47■□□□□ 0.23
BHLHE40-201ENST00000256495 EFCAB6Q5THR3 1501 aa16.46■□□□□ 0.23
BHLHE40-201ENST00000256495 PLEKHH1Q9ULM0 1364 aa16.46■□□□□ 0.23
BHLHE40-201ENST00000256495 ABCC3O15438 1527 aa16.46■□□□□ 0.23
BHLHE40-201ENST00000256495 TCERG1O14776 1098 aaKnown RBP16.46■□□□□ 0.23
BHLHE40-201ENST00000256495 PAK3O75914 559 aaPredicted RBP16.46■□□□□ 0.23
BHLHE40-201ENST00000256495 RRS1Q15050 365 aaKnown RBP16.46■□□□□ 0.23
BHLHE40-201ENST00000256495 TCP11L2Q8N4U5 519 aa16.46■□□□□ 0.23
BHLHE40-201ENST00000256495 ELL2O00472 640 aaPredicted RBP16.46■□□□□ 0.22
BHLHE40-201ENST00000256495 ABCA6Q8N139 1617 aa16.46■□□□□ 0.22
BHLHE40-201ENST00000256495 FRMPD1Q5SYB0 1578 aa16.45■□□□□ 0.22
BHLHE40-201ENST00000256495 NME9Q86XW9 330 aa16.44■□□□□ 0.22
BHLHE40-201ENST00000256495 EID1Q9Y6B2 187 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms