RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 SPATA31E1Q6ZUB1 1445 aa22.1■■□□□ 1.13
NDFIP1-201ENST00000253814 DZIP1LQ8IYY4 767 aaKnown RBP22.09■■□□□ 1.13
NDFIP1-201ENST00000253814 RUNDC1Q96C34 613 aa22.09■■□□□ 1.13
NDFIP1-201ENST00000253814 GPATCH8Q9UKJ3 1502 aaKnown RBP22.08■■□□□ 1.13
NDFIP1-201ENST00000253814 ZNF608Q9ULD9 1512 aaPredicted RBP22.08■■□□□ 1.13
NDFIP1-201ENST00000253814 LNPKQ9C0E8 428 aa22.08■■□□□ 1.13
NDFIP1-201ENST00000253814 PLEKHG5O94827 1062 aa22.08■■□□□ 1.12
NDFIP1-201ENST00000253814 TSR2Q969E8 191 aaKnown RBP22.07■■□□□ 1.12
NDFIP1-201ENST00000253814 GBP4Q96PP9 640 aa22.07■■□□□ 1.12
NDFIP1-201ENST00000253814 C22orf23Q9BZE7 217 aa22.07■■□□□ 1.12
NDFIP1-201ENST00000253814 PZPP20742 1482 aa22.07■■□□□ 1.12
NDFIP1-201ENST00000253814 ANKRD45Q5TZF3 282 aa22.06■■□□□ 1.12
NDFIP1-201ENST00000253814 IGHDP01880 384 aa22.06■■□□□ 1.12
NDFIP1-201ENST00000253814 PER1O15534 1290 aaPredicted RBP22.06■■□□□ 1.12
NDFIP1-201ENST00000253814 PRKCSHP14314 528 aaPredicted RBP22.05■■□□□ 1.12
NDFIP1-201ENST00000253814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.05■■□□□ 1.12
NDFIP1-201ENST00000253814 NUP153P49790 1475 aaKnown RBP22.05■■□□□ 1.12
NDFIP1-201ENST00000253814 ARHGAP5Q13017 1502 aa22.05■■□□□ 1.12
NDFIP1-201ENST00000253814 PTMAP06454 111 aaKnown RBP22.05■■□□□ 1.12
NDFIP1-201ENST00000253814 PDE3AQ14432 1141 aa22.05■■□□□ 1.12
NDFIP1-201ENST00000253814 RSPH6AQ9H0K4 717 aa22.05■■□□□ 1.12
NDFIP1-201ENST00000253814 ESF1Q9H501 851 aaKnown RBP22.05■■□□□ 1.12
NDFIP1-201ENST00000253814 ARID3AQ99856 593 aa22.04■■□□□ 1.12
NDFIP1-201ENST00000253814 PARD3Q8TEW0 1356 aa22.03■■□□□ 1.12
NDFIP1-201ENST00000253814 RALGAPBQ86X10 1494 aa22.03■■□□□ 1.12
NDFIP1-201ENST00000253814 LRPPRCP42704 1394 aaKnown RBP22.03■■□□□ 1.12
NDFIP1-201ENST00000253814 WWC1Q8IX03 1113 aa22.02■■□□□ 1.12
NDFIP1-201ENST00000253814 GGNBP2Q9H3C7 697 aa22.02■■□□□ 1.12
NDFIP1-201ENST00000253814 CHMP5Q9NZZ3 219 aa22.01■■□□□ 1.11
NDFIP1-201ENST00000253814 C8orf34Q49A92 452 aa22.01■■□□□ 1.11
NDFIP1-201ENST00000253814 TESK2Q96S53 571 aa22.01■■□□□ 1.11
NDFIP1-201ENST00000253814 FOXD4L5Q5VV16 416 aaPredicted RBP22■■□□□ 1.11
NDFIP1-201ENST00000253814 CASC1Q6TDU7 716 aa22■■□□□ 1.11
NDFIP1-201ENST00000253814 FOXD4L4Q8WXT5 416 aaPredicted RBP22■■□□□ 1.11
NDFIP1-201ENST00000253814 LAMC3Q9Y6N6 1575 aa22■■□□□ 1.11
NDFIP1-201ENST00000253814 PLCB2Q00722 1185 aa22■■□□□ 1.11
NDFIP1-201ENST00000253814 MRC2Q9UBG0 1479 aa21.99■■□□□ 1.11
NDFIP1-201ENST00000253814 DNTTIP2Q5QJE6 756 aaKnown RBP21.99■■□□□ 1.11
NDFIP1-201ENST00000253814 PLEKHH1Q9ULM0 1364 aa21.99■■□□□ 1.11
NDFIP1-201ENST00000253814 SYNJ2O15056 1496 aa21.98■■□□□ 1.11
NDFIP1-201ENST00000253814 MSNP26038 577 aaKnown RBP21.98■■□□□ 1.11
NDFIP1-201ENST00000253814 RIPK4P57078 832 aa21.98■■□□□ 1.11
NDFIP1-201ENST00000253814 EXOSC9Q06265 439 aaKnown RBP21.98■■□□□ 1.11
NDFIP1-201ENST00000253814 MAGI1Q96QZ7 1491 aaPredicted RBP21.98■■□□□ 1.11
NDFIP1-201ENST00000253814 CABP2Q9NPB3 220 aa21.98■■□□□ 1.11
NDFIP1-201ENST00000253814 SPINK5Q9NQ38 1064 aaPredicted RBP21.98■■□□□ 1.11
NDFIP1-201ENST00000253814 MINK1Q8N4C8 1332 aaPredicted RBP21.98■■□□□ 1.11
NDFIP1-201ENST00000253814 HDGFL2Q7Z4V5 671 aaPredicted RBP21.97■■□□□ 1.11
NDFIP1-201ENST00000253814 DDX19BQ9UMR2 479 aa21.97■■□□□ 1.11
NDFIP1-201ENST00000253814 TRAK2O60296 914 aa21.96■■□□□ 1.11
NDFIP1-201ENST00000253814 NGEFQ8N5V2 710 aa21.96■■□□□ 1.11
NDFIP1-201ENST00000253814 CHMP4BQ9H444 224 aaKnown RBP21.96■■□□□ 1.11
NDFIP1-201ENST00000253814 NOL8Q76FK4 1167 aaKnown RBP21.95■■□□□ 1.1
NDFIP1-201ENST00000253814 IFT140Q96RY7 1462 aa21.95■■□□□ 1.1
NDFIP1-201ENST00000253814 DDX11L8A8MPP1 907 aa21.94■■□□□ 1.1
NDFIP1-201ENST00000253814 SEC24BO95487 1268 aa21.94■■□□□ 1.1
NDFIP1-201ENST00000253814 WDR62O43379 1518 aa21.94■■□□□ 1.1
NDFIP1-201ENST00000253814 AMER1Q5JTC6 1135 aaPredicted RBP21.93■■□□□ 1.1
NDFIP1-201ENST00000253814 DDX49Q9Y6V7 483 aaKnown RBP21.93■■□□□ 1.1
NDFIP1-201ENST00000253814 DENND4BO75064 1496 aaPredicted RBP21.93■■□□□ 1.1
NDFIP1-201ENST00000253814 TNNQ9UQP3 1299 aa21.93■■□□□ 1.1
NDFIP1-201ENST00000253814 MLECQ14165 292 aa21.92■■□□□ 1.1
NDFIP1-201ENST00000253814 TERF2IPQ9NYB0 399 aa21.92■■□□□ 1.1
NDFIP1-201ENST00000253814 GRIN2AQ12879 1464 aa21.92■■□□□ 1.1
NDFIP1-201ENST00000253814 PLEKHH2Q8IVE3 1493 aa21.91■■□□□ 1.1
NDFIP1-201ENST00000253814 C1orf115Q9H7X2 142 aa21.91■■□□□ 1.1
NDFIP1-201ENST00000253814 SAMD9Q5K651 1589 aa21.91■■□□□ 1.1
NDFIP1-201ENST00000253814 CCDC141Q6ZP82 1450 aa21.91■■□□□ 1.1
NDFIP1-201ENST00000253814 EVC2Q86UK5 1308 aa21.91■■□□□ 1.1
NDFIP1-201ENST00000253814 RARSP54136 660 aaKnown RBP21.91■■□□□ 1.1
NDFIP1-201ENST00000253814 PRAG1Q86YV5 1406 aa21.9■■□□□ 1.1
NDFIP1-201ENST00000253814 FOXD4L6Q3SYB3 417 aaPredicted RBP21.9■■□□□ 1.1
NDFIP1-201ENST00000253814 FOXD4L3Q6VB84 417 aaPredicted RBP21.9■■□□□ 1.1
NDFIP1-201ENST00000253814 HMOX1P09601 288 aa21.9■■□□□ 1.1
NDFIP1-201ENST00000253814 NKTRP30414 1462 aaKnown RBP21.89■■□□□ 1.1
NDFIP1-201ENST00000253814 HSP90AA2PQ14568 343 aaPredicted RBP21.89■■□□□ 1.09
NDFIP1-201ENST00000253814 FAM43AQ8N2R8 423 aa21.89■■□□□ 1.09
NDFIP1-201ENST00000253814 TBC1D2Q9BYX2 928 aa21.89■■□□□ 1.09
NDFIP1-201ENST00000253814 CALD1Q05682 793 aaKnown RBP21.88■■□□□ 1.09
NDFIP1-201ENST00000253814 GCC2Q8IWJ2 1684 aa21.88■■□□□ 1.09
NDFIP1-201ENST00000253814 C14orf37Q86TY3 774 aa21.88■■□□□ 1.09
NDFIP1-201ENST00000253814 KDM5BQ9UGL1 1544 aa21.88■■□□□ 1.09
NDFIP1-201ENST00000253814 DNMT1P26358 1616 aaKnown RBP21.87■■□□□ 1.09
NDFIP1-201ENST00000253814 NOB1Q9ULX3 412 aaKnown RBP21.87■■□□□ 1.09
NDFIP1-201ENST00000253814 MCM4P33991 863 aa21.87■■□□□ 1.09
NDFIP1-201ENST00000253814 SLC4A10Q6U841 1118 aa21.87■■□□□ 1.09
NDFIP1-201ENST00000253814 PCDHB15Q9Y5E8 787 aa21.87■■□□□ 1.09
NDFIP1-201ENST00000253814 MVPQ14764 893 aaKnown RBP21.86■■□□□ 1.09
NDFIP1-201ENST00000253814 RAPGEF6Q8TEU7 1601 aa21.86■■□□□ 1.09
NDFIP1-201ENST00000253814 NUTM2FA1L443 756 aa21.86■■□□□ 1.09
NDFIP1-201ENST00000253814 DMRT2Q9Y5R5 561 aa21.86■■□□□ 1.09
NDFIP1-201ENST00000253814 VSIG10Q8N0Z9 540 aa21.86■■□□□ 1.09
NDFIP1-201ENST00000253814 DIAPH1O60610 1272 aaKnown RBP21.85■■□□□ 1.09
NDFIP1-201ENST00000253814 ADGRF5Q8IZF2 1346 aa21.84■■□□□ 1.09
NDFIP1-201ENST00000253814 STAC3Q96MF2 364 aa21.82■■□□□ 1.08
NDFIP1-201ENST00000253814 KDM2BQ8NHM5 1336 aa21.81■■□□□ 1.08
NDFIP1-201ENST00000253814 NSD3Q9BZ95 1437 aa21.81■■□□□ 1.08
NDFIP1-201ENST00000253814 KIF14Q15058 1648 aa21.8■■□□□ 1.08
NDFIP1-201ENST00000253814 VGFO15240 615 aaPredicted RBP21.8■■□□□ 1.08
NDFIP1-201ENST00000253814 RLBP1P12271 317 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms